diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/__init__.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/__init__.py new file mode 100644 index 0000000000000000000000000000000000000000..e69de29bb2d1d6434b8b29ae775ad8c2e48c5391 diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/conftest.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/conftest.py new file mode 100644 index 0000000000000000000000000000000000000000..bfb7acdcf481273e50c18540c141017deb52e094 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/conftest.py @@ -0,0 +1,41 @@ +import numpy as np +import pytest + +from pandas import ( + Series, + array, +) + + +@pytest.fixture(params=[None, False]) +def sort(request): + """ + Valid values for the 'sort' parameter used in the Index + setops methods (intersection, union, etc.) + + Caution: + Don't confuse this one with the "sort" fixture used + for DataFrame.append or concat. That one has + parameters [True, False]. + + We can't combine them as sort=True is not permitted + in the Index setops methods. + """ + return request.param + + +@pytest.fixture(params=["D", "3D", "-3D", "h", "2h", "-2h", "min", "2min", "s", "-3s"]) +def freq_sample(request): + """ + Valid values for 'freq' parameter used to create date_range and + timedelta_range.. + """ + return request.param + + +@pytest.fixture(params=[list, tuple, np.array, array, Series]) +def listlike_box(request): + """ + Types that may be passed as the indexer to searchsorted. + """ + return request.param diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/__init__.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/__init__.py new file mode 100644 index 0000000000000000000000000000000000000000..e69de29bb2d1d6434b8b29ae775ad8c2e48c5391 diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/__pycache__/__init__.cpython-310.pyc b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/__pycache__/__init__.cpython-310.pyc new file mode 100644 index 0000000000000000000000000000000000000000..f1f852441829c50da2fda462b08f4aa86fd72ab5 Binary files /dev/null and b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/__pycache__/__init__.cpython-310.pyc differ diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/__pycache__/test_astype.cpython-310.pyc b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/__pycache__/test_astype.cpython-310.pyc new file mode 100644 index 0000000000000000000000000000000000000000..a4ea24a9a7bfecc9a4cfc5e50df946b476d2b22d Binary files /dev/null and b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/__pycache__/test_astype.cpython-310.pyc differ diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/__pycache__/test_indexing.cpython-310.pyc b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/__pycache__/test_indexing.cpython-310.pyc new file mode 100644 index 0000000000000000000000000000000000000000..8a87740e82dd39a5da813551b92461c2be630b3f Binary files /dev/null and b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/__pycache__/test_indexing.cpython-310.pyc differ diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/__pycache__/test_join.cpython-310.pyc b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/__pycache__/test_join.cpython-310.pyc new file mode 100644 index 0000000000000000000000000000000000000000..3317a755855b4279b35b7b23d38300174e30ede5 Binary files /dev/null and b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/__pycache__/test_join.cpython-310.pyc differ diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/__pycache__/test_numeric.cpython-310.pyc b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/__pycache__/test_numeric.cpython-310.pyc new file mode 100644 index 0000000000000000000000000000000000000000..3f5cc62dd56123dec006d4d2c8877be888977583 Binary files /dev/null and b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/__pycache__/test_numeric.cpython-310.pyc differ diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/test_astype.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/test_astype.py new file mode 100644 index 0000000000000000000000000000000000000000..1c2df6008de5d85789b026e947ac27a8036a9be7 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/test_astype.py @@ -0,0 +1,95 @@ +import numpy as np +import pytest + +from pandas import ( + Index, + to_datetime, + to_timedelta, +) +import pandas._testing as tm + + +class TestAstype: + def test_astype_float64_to_uint64(self): + # GH#45309 used to incorrectly return Index with int64 dtype + idx = Index([0.0, 5.0, 10.0, 15.0, 20.0], dtype=np.float64) + result = idx.astype("u8") + expected = Index([0, 5, 10, 15, 20], dtype=np.uint64) + tm.assert_index_equal(result, expected, exact=True) + + idx_with_negatives = idx - 10 + with pytest.raises(ValueError, match="losslessly"): + idx_with_negatives.astype(np.uint64) + + def test_astype_float64_to_object(self): + float_index = Index([0.0, 2.5, 5.0, 7.5, 10.0], dtype=np.float64) + result = float_index.astype(object) + assert result.equals(float_index) + assert float_index.equals(result) + assert isinstance(result, Index) and result.dtype == object + + def test_astype_float64_mixed_to_object(self): + # mixed int-float + idx = Index([1.5, 2, 3, 4, 5], dtype=np.float64) + idx.name = "foo" + result = idx.astype(object) + assert result.equals(idx) + assert idx.equals(result) + assert isinstance(result, Index) and result.dtype == object + + @pytest.mark.parametrize("dtype", ["int16", "int32", "int64"]) + def test_astype_float64_to_int_dtype(self, dtype): + # GH#12881 + # a float astype int + idx = Index([0, 1, 2], dtype=np.float64) + result = idx.astype(dtype) + expected = Index([0, 1, 2], dtype=dtype) + tm.assert_index_equal(result, expected, exact=True) + + idx = Index([0, 1.1, 2], dtype=np.float64) + result = idx.astype(dtype) + expected = Index([0, 1, 2], dtype=dtype) + tm.assert_index_equal(result, expected, exact=True) + + @pytest.mark.parametrize("dtype", ["float32", "float64"]) + def test_astype_float64_to_float_dtype(self, dtype): + # GH#12881 + # a float astype int + idx = Index([0, 1, 2], dtype=np.float64) + result = idx.astype(dtype) + assert isinstance(result, Index) and result.dtype == dtype + + @pytest.mark.parametrize("dtype", ["M8[ns]", "m8[ns]"]) + def test_astype_float_to_datetimelike(self, dtype): + # GH#49660 pre-2.0 Index.astype from floating to M8/m8/Period raised, + # inconsistent with Series.astype + idx = Index([0, 1.1, 2], dtype=np.float64) + + result = idx.astype(dtype) + if dtype[0] == "M": + expected = to_datetime(idx.values) + else: + expected = to_timedelta(idx.values) + tm.assert_index_equal(result, expected) + + # check that we match Series behavior + result = idx.to_series().set_axis(range(3)).astype(dtype) + expected = expected.to_series().set_axis(range(3)) + tm.assert_series_equal(result, expected) + + @pytest.mark.parametrize("dtype", [int, "int16", "int32", "int64"]) + @pytest.mark.parametrize("non_finite", [np.inf, np.nan]) + def test_cannot_cast_inf_to_int(self, non_finite, dtype): + # GH#13149 + idx = Index([1, 2, non_finite], dtype=np.float64) + + msg = r"Cannot convert non-finite values \(NA or inf\) to integer" + with pytest.raises(ValueError, match=msg): + idx.astype(dtype) + + def test_astype_from_object(self): + index = Index([1.0, np.nan, 0.2], dtype="object") + result = index.astype(float) + expected = Index([1.0, np.nan, 0.2], dtype=np.float64) + assert result.dtype == expected.dtype + tm.assert_index_equal(result, expected) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/test_indexing.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/test_indexing.py new file mode 100644 index 0000000000000000000000000000000000000000..cd28d519313ed36228040361dfbb2a8dccf77be5 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/test_indexing.py @@ -0,0 +1,611 @@ +import numpy as np +import pytest + +from pandas.errors import InvalidIndexError + +from pandas import ( + NA, + Index, + RangeIndex, + Series, + Timestamp, +) +import pandas._testing as tm +from pandas.core.arrays import ( + ArrowExtensionArray, + FloatingArray, +) + + +@pytest.fixture +def index_large(): + # large values used in Index[uint64] tests where no compat needed with Int64/Float64 + large = [2**63, 2**63 + 10, 2**63 + 15, 2**63 + 20, 2**63 + 25] + return Index(large, dtype=np.uint64) + + +class TestGetLoc: + def test_get_loc(self): + index = Index([0, 1, 2]) + assert index.get_loc(1) == 1 + + def test_get_loc_raises_bad_label(self): + index = Index([0, 1, 2]) + with pytest.raises(InvalidIndexError, match=r"\[1, 2\]"): + index.get_loc([1, 2]) + + def test_get_loc_float64(self): + idx = Index([0.0, 1.0, 2.0], dtype=np.float64) + + with pytest.raises(KeyError, match="^'foo'$"): + idx.get_loc("foo") + with pytest.raises(KeyError, match=r"^1\.5$"): + idx.get_loc(1.5) + with pytest.raises(KeyError, match="^True$"): + idx.get_loc(True) + with pytest.raises(KeyError, match="^False$"): + idx.get_loc(False) + + def test_get_loc_na(self): + idx = Index([np.nan, 1, 2], dtype=np.float64) + assert idx.get_loc(1) == 1 + assert idx.get_loc(np.nan) == 0 + + idx = Index([np.nan, 1, np.nan], dtype=np.float64) + assert idx.get_loc(1) == 1 + + # representable by slice [0:2:2] + msg = "'Cannot get left slice bound for non-unique label: nan'" + with pytest.raises(KeyError, match=msg): + idx.slice_locs(np.nan) + # not representable by slice + idx = Index([np.nan, 1, np.nan, np.nan], dtype=np.float64) + assert idx.get_loc(1) == 1 + msg = "'Cannot get left slice bound for non-unique label: nan" + with pytest.raises(KeyError, match=msg): + idx.slice_locs(np.nan) + + def test_get_loc_missing_nan(self): + # GH#8569 + idx = Index([1, 2], dtype=np.float64) + assert idx.get_loc(1) == 0 + with pytest.raises(KeyError, match=r"^3$"): + idx.get_loc(3) + with pytest.raises(KeyError, match="^nan$"): + idx.get_loc(np.nan) + with pytest.raises(InvalidIndexError, match=r"\[nan\]"): + # listlike/non-hashable raises TypeError + idx.get_loc([np.nan]) + + @pytest.mark.parametrize("vals", [[1], [1.0], [Timestamp("2019-12-31")], ["test"]]) + def test_get_loc_float_index_nan_with_method(self, vals): + # GH#39382 + idx = Index(vals) + with pytest.raises(KeyError, match="nan"): + idx.get_loc(np.nan) + + @pytest.mark.parametrize("dtype", ["f8", "i8", "u8"]) + def test_get_loc_numericindex_none_raises(self, dtype): + # case that goes through searchsorted and key is non-comparable to values + arr = np.arange(10**7, dtype=dtype) + idx = Index(arr) + with pytest.raises(KeyError, match="None"): + idx.get_loc(None) + + def test_get_loc_overflows(self): + # unique but non-monotonic goes through IndexEngine.mapping.get_item + idx = Index([0, 2, 1]) + + val = np.iinfo(np.int64).max + 1 + + with pytest.raises(KeyError, match=str(val)): + idx.get_loc(val) + with pytest.raises(KeyError, match=str(val)): + idx._engine.get_loc(val) + + +class TestGetIndexer: + def test_get_indexer(self): + index1 = Index([1, 2, 3, 4, 5]) + index2 = Index([2, 4, 6]) + + r1 = index1.get_indexer(index2) + e1 = np.array([1, 3, -1], dtype=np.intp) + tm.assert_almost_equal(r1, e1) + + @pytest.mark.parametrize("reverse", [True, False]) + @pytest.mark.parametrize( + "expected,method", + [ + (np.array([-1, 0, 0, 1, 1], dtype=np.intp), "pad"), + (np.array([-1, 0, 0, 1, 1], dtype=np.intp), "ffill"), + (np.array([0, 0, 1, 1, 2], dtype=np.intp), "backfill"), + (np.array([0, 0, 1, 1, 2], dtype=np.intp), "bfill"), + ], + ) + def test_get_indexer_methods(self, reverse, expected, method): + index1 = Index([1, 2, 3, 4, 5]) + index2 = Index([2, 4, 6]) + + if reverse: + index1 = index1[::-1] + expected = expected[::-1] + + result = index2.get_indexer(index1, method=method) + tm.assert_almost_equal(result, expected) + + def test_get_indexer_invalid(self): + # GH10411 + index = Index(np.arange(10)) + + with pytest.raises(ValueError, match="tolerance argument"): + index.get_indexer([1, 0], tolerance=1) + + with pytest.raises(ValueError, match="limit argument"): + index.get_indexer([1, 0], limit=1) + + @pytest.mark.parametrize( + "method, tolerance, indexer, expected", + [ + ("pad", None, [0, 5, 9], [0, 5, 9]), + ("backfill", None, [0, 5, 9], [0, 5, 9]), + ("nearest", None, [0, 5, 9], [0, 5, 9]), + ("pad", 0, [0, 5, 9], [0, 5, 9]), + ("backfill", 0, [0, 5, 9], [0, 5, 9]), + ("nearest", 0, [0, 5, 9], [0, 5, 9]), + ("pad", None, [0.2, 1.8, 8.5], [0, 1, 8]), + ("backfill", None, [0.2, 1.8, 8.5], [1, 2, 9]), + ("nearest", None, [0.2, 1.8, 8.5], [0, 2, 9]), + ("pad", 1, [0.2, 1.8, 8.5], [0, 1, 8]), + ("backfill", 1, [0.2, 1.8, 8.5], [1, 2, 9]), + ("nearest", 1, [0.2, 1.8, 8.5], [0, 2, 9]), + ("pad", 0.2, [0.2, 1.8, 8.5], [0, -1, -1]), + ("backfill", 0.2, [0.2, 1.8, 8.5], [-1, 2, -1]), + ("nearest", 0.2, [0.2, 1.8, 8.5], [0, 2, -1]), + ], + ) + def test_get_indexer_nearest(self, method, tolerance, indexer, expected): + index = Index(np.arange(10)) + + actual = index.get_indexer(indexer, method=method, tolerance=tolerance) + tm.assert_numpy_array_equal(actual, np.array(expected, dtype=np.intp)) + + @pytest.mark.parametrize("listtype", [list, tuple, Series, np.array]) + @pytest.mark.parametrize( + "tolerance, expected", + list( + zip( + [[0.3, 0.3, 0.1], [0.2, 0.1, 0.1], [0.1, 0.5, 0.5]], + [[0, 2, -1], [0, -1, -1], [-1, 2, 9]], + ) + ), + ) + def test_get_indexer_nearest_listlike_tolerance( + self, tolerance, expected, listtype + ): + index = Index(np.arange(10)) + + actual = index.get_indexer( + [0.2, 1.8, 8.5], method="nearest", tolerance=listtype(tolerance) + ) + tm.assert_numpy_array_equal(actual, np.array(expected, dtype=np.intp)) + + def test_get_indexer_nearest_error(self): + index = Index(np.arange(10)) + with pytest.raises(ValueError, match="limit argument"): + index.get_indexer([1, 0], method="nearest", limit=1) + + with pytest.raises(ValueError, match="tolerance size must match"): + index.get_indexer([1, 0], method="nearest", tolerance=[1, 2, 3]) + + @pytest.mark.parametrize( + "method,expected", + [("pad", [8, 7, 0]), ("backfill", [9, 8, 1]), ("nearest", [9, 7, 0])], + ) + def test_get_indexer_nearest_decreasing(self, method, expected): + index = Index(np.arange(10))[::-1] + + actual = index.get_indexer([0, 5, 9], method=method) + tm.assert_numpy_array_equal(actual, np.array([9, 4, 0], dtype=np.intp)) + + actual = index.get_indexer([0.2, 1.8, 8.5], method=method) + tm.assert_numpy_array_equal(actual, np.array(expected, dtype=np.intp)) + + @pytest.mark.parametrize("idx_dtype", ["int64", "float64", "uint64", "range"]) + @pytest.mark.parametrize("method", ["get_indexer", "get_indexer_non_unique"]) + def test_get_indexer_numeric_index_boolean_target(self, method, idx_dtype): + # GH 16877 + + if idx_dtype == "range": + numeric_index = RangeIndex(4) + else: + numeric_index = Index(np.arange(4, dtype=idx_dtype)) + + other = Index([True, False, True]) + + result = getattr(numeric_index, method)(other) + expected = np.array([-1, -1, -1], dtype=np.intp) + if method == "get_indexer": + tm.assert_numpy_array_equal(result, expected) + else: + missing = np.arange(3, dtype=np.intp) + tm.assert_numpy_array_equal(result[0], expected) + tm.assert_numpy_array_equal(result[1], missing) + + @pytest.mark.parametrize("method", ["pad", "backfill", "nearest"]) + def test_get_indexer_with_method_numeric_vs_bool(self, method): + left = Index([1, 2, 3]) + right = Index([True, False]) + + with pytest.raises(TypeError, match="Cannot compare"): + left.get_indexer(right, method=method) + + with pytest.raises(TypeError, match="Cannot compare"): + right.get_indexer(left, method=method) + + def test_get_indexer_numeric_vs_bool(self): + left = Index([1, 2, 3]) + right = Index([True, False]) + + res = left.get_indexer(right) + expected = -1 * np.ones(len(right), dtype=np.intp) + tm.assert_numpy_array_equal(res, expected) + + res = right.get_indexer(left) + expected = -1 * np.ones(len(left), dtype=np.intp) + tm.assert_numpy_array_equal(res, expected) + + res = left.get_indexer_non_unique(right)[0] + expected = -1 * np.ones(len(right), dtype=np.intp) + tm.assert_numpy_array_equal(res, expected) + + res = right.get_indexer_non_unique(left)[0] + expected = -1 * np.ones(len(left), dtype=np.intp) + tm.assert_numpy_array_equal(res, expected) + + def test_get_indexer_float64(self): + idx = Index([0.0, 1.0, 2.0], dtype=np.float64) + tm.assert_numpy_array_equal( + idx.get_indexer(idx), np.array([0, 1, 2], dtype=np.intp) + ) + + target = [-0.1, 0.5, 1.1] + tm.assert_numpy_array_equal( + idx.get_indexer(target, "pad"), np.array([-1, 0, 1], dtype=np.intp) + ) + tm.assert_numpy_array_equal( + idx.get_indexer(target, "backfill"), np.array([0, 1, 2], dtype=np.intp) + ) + tm.assert_numpy_array_equal( + idx.get_indexer(target, "nearest"), np.array([0, 1, 1], dtype=np.intp) + ) + + def test_get_indexer_nan(self): + # GH#7820 + result = Index([1, 2, np.nan], dtype=np.float64).get_indexer([np.nan]) + expected = np.array([2], dtype=np.intp) + tm.assert_numpy_array_equal(result, expected) + + def test_get_indexer_int64(self): + index = Index(range(0, 20, 2), dtype=np.int64) + target = Index(np.arange(10), dtype=np.int64) + indexer = index.get_indexer(target) + expected = np.array([0, -1, 1, -1, 2, -1, 3, -1, 4, -1], dtype=np.intp) + tm.assert_numpy_array_equal(indexer, expected) + + target = Index(np.arange(10), dtype=np.int64) + indexer = index.get_indexer(target, method="pad") + expected = np.array([0, 0, 1, 1, 2, 2, 3, 3, 4, 4], dtype=np.intp) + tm.assert_numpy_array_equal(indexer, expected) + + target = Index(np.arange(10), dtype=np.int64) + indexer = index.get_indexer(target, method="backfill") + expected = np.array([0, 1, 1, 2, 2, 3, 3, 4, 4, 5], dtype=np.intp) + tm.assert_numpy_array_equal(indexer, expected) + + def test_get_indexer_uint64(self, index_large): + target = Index(np.arange(10).astype("uint64") * 5 + 2**63) + indexer = index_large.get_indexer(target) + expected = np.array([0, -1, 1, 2, 3, 4, -1, -1, -1, -1], dtype=np.intp) + tm.assert_numpy_array_equal(indexer, expected) + + target = Index(np.arange(10).astype("uint64") * 5 + 2**63) + indexer = index_large.get_indexer(target, method="pad") + expected = np.array([0, 0, 1, 2, 3, 4, 4, 4, 4, 4], dtype=np.intp) + tm.assert_numpy_array_equal(indexer, expected) + + target = Index(np.arange(10).astype("uint64") * 5 + 2**63) + indexer = index_large.get_indexer(target, method="backfill") + expected = np.array([0, 1, 1, 2, 3, 4, -1, -1, -1, -1], dtype=np.intp) + tm.assert_numpy_array_equal(indexer, expected) + + @pytest.mark.parametrize("val, val2", [(4, 5), (4, 4), (4, NA), (NA, NA)]) + def test_get_loc_masked(self, val, val2, any_numeric_ea_and_arrow_dtype): + # GH#39133 + idx = Index([1, 2, 3, val, val2], dtype=any_numeric_ea_and_arrow_dtype) + result = idx.get_loc(2) + assert result == 1 + + with pytest.raises(KeyError, match="9"): + idx.get_loc(9) + + def test_get_loc_masked_na(self, any_numeric_ea_and_arrow_dtype): + # GH#39133 + idx = Index([1, 2, NA], dtype=any_numeric_ea_and_arrow_dtype) + result = idx.get_loc(NA) + assert result == 2 + + idx = Index([1, 2, NA, NA], dtype=any_numeric_ea_and_arrow_dtype) + result = idx.get_loc(NA) + tm.assert_numpy_array_equal(result, np.array([False, False, True, True])) + + idx = Index([1, 2, 3], dtype=any_numeric_ea_and_arrow_dtype) + with pytest.raises(KeyError, match="NA"): + idx.get_loc(NA) + + def test_get_loc_masked_na_and_nan(self): + # GH#39133 + idx = Index( + FloatingArray( + np.array([1, 2, 1, np.nan]), mask=np.array([False, False, True, False]) + ) + ) + result = idx.get_loc(NA) + assert result == 2 + result = idx.get_loc(np.nan) + assert result == 3 + + idx = Index( + FloatingArray(np.array([1, 2, 1.0]), mask=np.array([False, False, True])) + ) + result = idx.get_loc(NA) + assert result == 2 + with pytest.raises(KeyError, match="nan"): + idx.get_loc(np.nan) + + idx = Index( + FloatingArray( + np.array([1, 2, np.nan]), mask=np.array([False, False, False]) + ) + ) + result = idx.get_loc(np.nan) + assert result == 2 + with pytest.raises(KeyError, match="NA"): + idx.get_loc(NA) + + @pytest.mark.parametrize("val", [4, 2]) + def test_get_indexer_masked_na(self, any_numeric_ea_and_arrow_dtype, val): + # GH#39133 + idx = Index([1, 2, NA, 3, val], dtype=any_numeric_ea_and_arrow_dtype) + result = idx.get_indexer_for([1, NA, 5]) + expected = np.array([0, 2, -1]) + tm.assert_numpy_array_equal(result, expected, check_dtype=False) + + @pytest.mark.parametrize("dtype", ["boolean", "bool[pyarrow]"]) + def test_get_indexer_masked_na_boolean(self, dtype): + # GH#39133 + if dtype == "bool[pyarrow]": + pytest.importorskip("pyarrow") + idx = Index([True, False, NA], dtype=dtype) + result = idx.get_loc(False) + assert result == 1 + result = idx.get_loc(NA) + assert result == 2 + + def test_get_indexer_arrow_dictionary_target(self): + pa = pytest.importorskip("pyarrow") + target = Index( + ArrowExtensionArray( + pa.array([1, 2], type=pa.dictionary(pa.int8(), pa.int8())) + ) + ) + idx = Index([1]) + + result = idx.get_indexer(target) + expected = np.array([0, -1], dtype=np.int64) + tm.assert_numpy_array_equal(result, expected) + + result_1, result_2 = idx.get_indexer_non_unique(target) + expected_1, expected_2 = np.array([0, -1], dtype=np.int64), np.array( + [1], dtype=np.int64 + ) + tm.assert_numpy_array_equal(result_1, expected_1) + tm.assert_numpy_array_equal(result_2, expected_2) + + +class TestWhere: + @pytest.mark.parametrize( + "index", + [ + Index(np.arange(5, dtype="float64")), + Index(range(0, 20, 2), dtype=np.int64), + Index(np.arange(5, dtype="uint64")), + ], + ) + def test_where(self, listlike_box, index): + cond = [True] * len(index) + expected = index + result = index.where(listlike_box(cond)) + + cond = [False] + [True] * (len(index) - 1) + expected = Index([index._na_value] + index[1:].tolist(), dtype=np.float64) + result = index.where(listlike_box(cond)) + tm.assert_index_equal(result, expected) + + def test_where_uint64(self): + idx = Index([0, 6, 2], dtype=np.uint64) + mask = np.array([False, True, False]) + other = np.array([1], dtype=np.int64) + + expected = Index([1, 6, 1], dtype=np.uint64) + + result = idx.where(mask, other) + tm.assert_index_equal(result, expected) + + result = idx.putmask(~mask, other) + tm.assert_index_equal(result, expected) + + def test_where_infers_type_instead_of_trying_to_convert_string_to_float(self): + # GH 32413 + index = Index([1, np.nan]) + cond = index.notna() + other = Index(["a", "b"], dtype="string") + + expected = Index([1.0, "b"]) + result = index.where(cond, other) + + tm.assert_index_equal(result, expected) + + +class TestTake: + @pytest.mark.parametrize("idx_dtype", [np.float64, np.int64, np.uint64]) + def test_take_preserve_name(self, idx_dtype): + index = Index([1, 2, 3, 4], dtype=idx_dtype, name="foo") + taken = index.take([3, 0, 1]) + assert index.name == taken.name + + def test_take_fill_value_float64(self): + # GH 12631 + idx = Index([1.0, 2.0, 3.0], name="xxx", dtype=np.float64) + result = idx.take(np.array([1, 0, -1])) + expected = Index([2.0, 1.0, 3.0], dtype=np.float64, name="xxx") + tm.assert_index_equal(result, expected) + + # fill_value + result = idx.take(np.array([1, 0, -1]), fill_value=True) + expected = Index([2.0, 1.0, np.nan], dtype=np.float64, name="xxx") + tm.assert_index_equal(result, expected) + + # allow_fill=False + result = idx.take(np.array([1, 0, -1]), allow_fill=False, fill_value=True) + expected = Index([2.0, 1.0, 3.0], dtype=np.float64, name="xxx") + tm.assert_index_equal(result, expected) + + msg = ( + "When allow_fill=True and fill_value is not None, " + "all indices must be >= -1" + ) + with pytest.raises(ValueError, match=msg): + idx.take(np.array([1, 0, -2]), fill_value=True) + with pytest.raises(ValueError, match=msg): + idx.take(np.array([1, 0, -5]), fill_value=True) + + msg = "index -5 is out of bounds for (axis 0 with )?size 3" + with pytest.raises(IndexError, match=msg): + idx.take(np.array([1, -5])) + + @pytest.mark.parametrize("dtype", [np.int64, np.uint64]) + def test_take_fill_value_ints(self, dtype): + # see gh-12631 + idx = Index([1, 2, 3], dtype=dtype, name="xxx") + result = idx.take(np.array([1, 0, -1])) + expected = Index([2, 1, 3], dtype=dtype, name="xxx") + tm.assert_index_equal(result, expected) + + name = type(idx).__name__ + msg = f"Unable to fill values because {name} cannot contain NA" + + # fill_value=True + with pytest.raises(ValueError, match=msg): + idx.take(np.array([1, 0, -1]), fill_value=True) + + # allow_fill=False + result = idx.take(np.array([1, 0, -1]), allow_fill=False, fill_value=True) + expected = Index([2, 1, 3], dtype=dtype, name="xxx") + tm.assert_index_equal(result, expected) + + with pytest.raises(ValueError, match=msg): + idx.take(np.array([1, 0, -2]), fill_value=True) + with pytest.raises(ValueError, match=msg): + idx.take(np.array([1, 0, -5]), fill_value=True) + + msg = "index -5 is out of bounds for (axis 0 with )?size 3" + with pytest.raises(IndexError, match=msg): + idx.take(np.array([1, -5])) + + +class TestContains: + @pytest.mark.parametrize("dtype", [np.float64, np.int64, np.uint64]) + def test_contains_none(self, dtype): + # GH#35788 should return False, not raise TypeError + index = Index([0, 1, 2, 3, 4], dtype=dtype) + assert None not in index + + def test_contains_float64_nans(self): + index = Index([1.0, 2.0, np.nan], dtype=np.float64) + assert np.nan in index + + def test_contains_float64_not_nans(self): + index = Index([1.0, 2.0, np.nan], dtype=np.float64) + assert 1.0 in index + + +class TestSliceLocs: + @pytest.mark.parametrize("dtype", [int, float]) + def test_slice_locs(self, dtype): + index = Index(np.array([0, 1, 2, 5, 6, 7, 9, 10], dtype=dtype)) + n = len(index) + + assert index.slice_locs(start=2) == (2, n) + assert index.slice_locs(start=3) == (3, n) + assert index.slice_locs(3, 8) == (3, 6) + assert index.slice_locs(5, 10) == (3, n) + assert index.slice_locs(end=8) == (0, 6) + assert index.slice_locs(end=9) == (0, 7) + + # reversed + index2 = index[::-1] + assert index2.slice_locs(8, 2) == (2, 6) + assert index2.slice_locs(7, 3) == (2, 5) + + @pytest.mark.parametrize("dtype", [int, float]) + def test_slice_locs_float_locs(self, dtype): + index = Index(np.array([0, 1, 2, 5, 6, 7, 9, 10], dtype=dtype)) + n = len(index) + assert index.slice_locs(5.0, 10.0) == (3, n) + assert index.slice_locs(4.5, 10.5) == (3, 8) + + index2 = index[::-1] + assert index2.slice_locs(8.5, 1.5) == (2, 6) + assert index2.slice_locs(10.5, -1) == (0, n) + + @pytest.mark.parametrize("dtype", [int, float]) + def test_slice_locs_dup_numeric(self, dtype): + index = Index(np.array([10, 12, 12, 14], dtype=dtype)) + assert index.slice_locs(12, 12) == (1, 3) + assert index.slice_locs(11, 13) == (1, 3) + + index2 = index[::-1] + assert index2.slice_locs(12, 12) == (1, 3) + assert index2.slice_locs(13, 11) == (1, 3) + + def test_slice_locs_na(self): + index = Index([np.nan, 1, 2]) + assert index.slice_locs(1) == (1, 3) + assert index.slice_locs(np.nan) == (0, 3) + + index = Index([0, np.nan, np.nan, 1, 2]) + assert index.slice_locs(np.nan) == (1, 5) + + def test_slice_locs_na_raises(self): + index = Index([np.nan, 1, 2]) + with pytest.raises(KeyError, match=""): + index.slice_locs(start=1.5) + + with pytest.raises(KeyError, match=""): + index.slice_locs(end=1.5) + + +class TestGetSliceBounds: + @pytest.mark.parametrize("side, expected", [("left", 4), ("right", 5)]) + def test_get_slice_bounds_within(self, side, expected): + index = Index(range(6)) + result = index.get_slice_bound(4, side=side) + assert result == expected + + @pytest.mark.parametrize("side", ["left", "right"]) + @pytest.mark.parametrize("bound, expected", [(-1, 0), (10, 6)]) + def test_get_slice_bounds_outside(self, side, expected, bound): + index = Index(range(6)) + result = index.get_slice_bound(bound, side=side) + assert result == expected diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/test_join.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/test_join.py new file mode 100644 index 0000000000000000000000000000000000000000..918d5052167356b1d51018434c03e6682f828872 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/test_join.py @@ -0,0 +1,380 @@ +import numpy as np +import pytest + +import pandas._testing as tm +from pandas.core.indexes.api import Index + + +class TestJoinInt64Index: + def test_join_non_unique(self): + left = Index([4, 4, 3, 3]) + + joined, lidx, ridx = left.join(left, return_indexers=True) + + exp_joined = Index([4, 4, 4, 4, 3, 3, 3, 3]) + tm.assert_index_equal(joined, exp_joined) + + exp_lidx = np.array([0, 0, 1, 1, 2, 2, 3, 3], dtype=np.intp) + tm.assert_numpy_array_equal(lidx, exp_lidx) + + exp_ridx = np.array([0, 1, 0, 1, 2, 3, 2, 3], dtype=np.intp) + tm.assert_numpy_array_equal(ridx, exp_ridx) + + def test_join_inner(self): + index = Index(range(0, 20, 2), dtype=np.int64) + other = Index([7, 12, 25, 1, 2, 5], dtype=np.int64) + other_mono = Index([1, 2, 5, 7, 12, 25], dtype=np.int64) + + # not monotonic + res, lidx, ridx = index.join(other, how="inner", return_indexers=True) + + # no guarantee of sortedness, so sort for comparison purposes + ind = res.argsort() + res = res.take(ind) + lidx = lidx.take(ind) + ridx = ridx.take(ind) + + eres = Index([2, 12], dtype=np.int64) + elidx = np.array([1, 6], dtype=np.intp) + eridx = np.array([4, 1], dtype=np.intp) + + assert isinstance(res, Index) and res.dtype == np.int64 + tm.assert_index_equal(res, eres) + tm.assert_numpy_array_equal(lidx, elidx) + tm.assert_numpy_array_equal(ridx, eridx) + + # monotonic + res, lidx, ridx = index.join(other_mono, how="inner", return_indexers=True) + + res2 = index.intersection(other_mono) + tm.assert_index_equal(res, res2) + + elidx = np.array([1, 6], dtype=np.intp) + eridx = np.array([1, 4], dtype=np.intp) + assert isinstance(res, Index) and res.dtype == np.int64 + tm.assert_index_equal(res, eres) + tm.assert_numpy_array_equal(lidx, elidx) + tm.assert_numpy_array_equal(ridx, eridx) + + def test_join_left(self): + index = Index(range(0, 20, 2), dtype=np.int64) + other = Index([7, 12, 25, 1, 2, 5], dtype=np.int64) + other_mono = Index([1, 2, 5, 7, 12, 25], dtype=np.int64) + + # not monotonic + res, lidx, ridx = index.join(other, how="left", return_indexers=True) + eres = index + eridx = np.array([-1, 4, -1, -1, -1, -1, 1, -1, -1, -1], dtype=np.intp) + + assert isinstance(res, Index) and res.dtype == np.int64 + tm.assert_index_equal(res, eres) + assert lidx is None + tm.assert_numpy_array_equal(ridx, eridx) + + # monotonic + res, lidx, ridx = index.join(other_mono, how="left", return_indexers=True) + eridx = np.array([-1, 1, -1, -1, -1, -1, 4, -1, -1, -1], dtype=np.intp) + assert isinstance(res, Index) and res.dtype == np.int64 + tm.assert_index_equal(res, eres) + assert lidx is None + tm.assert_numpy_array_equal(ridx, eridx) + + # non-unique + idx = Index([1, 1, 2, 5]) + idx2 = Index([1, 2, 5, 7, 9]) + res, lidx, ridx = idx2.join(idx, how="left", return_indexers=True) + eres = Index([1, 1, 2, 5, 7, 9]) # 1 is in idx2, so it should be x2 + eridx = np.array([0, 1, 2, 3, -1, -1], dtype=np.intp) + elidx = np.array([0, 0, 1, 2, 3, 4], dtype=np.intp) + tm.assert_index_equal(res, eres) + tm.assert_numpy_array_equal(lidx, elidx) + tm.assert_numpy_array_equal(ridx, eridx) + + def test_join_right(self): + index = Index(range(0, 20, 2), dtype=np.int64) + other = Index([7, 12, 25, 1, 2, 5], dtype=np.int64) + other_mono = Index([1, 2, 5, 7, 12, 25], dtype=np.int64) + + # not monotonic + res, lidx, ridx = index.join(other, how="right", return_indexers=True) + eres = other + elidx = np.array([-1, 6, -1, -1, 1, -1], dtype=np.intp) + + assert isinstance(other, Index) and other.dtype == np.int64 + tm.assert_index_equal(res, eres) + tm.assert_numpy_array_equal(lidx, elidx) + assert ridx is None + + # monotonic + res, lidx, ridx = index.join(other_mono, how="right", return_indexers=True) + eres = other_mono + elidx = np.array([-1, 1, -1, -1, 6, -1], dtype=np.intp) + assert isinstance(other, Index) and other.dtype == np.int64 + tm.assert_index_equal(res, eres) + tm.assert_numpy_array_equal(lidx, elidx) + assert ridx is None + + # non-unique + idx = Index([1, 1, 2, 5]) + idx2 = Index([1, 2, 5, 7, 9]) + res, lidx, ridx = idx.join(idx2, how="right", return_indexers=True) + eres = Index([1, 1, 2, 5, 7, 9]) # 1 is in idx2, so it should be x2 + elidx = np.array([0, 1, 2, 3, -1, -1], dtype=np.intp) + eridx = np.array([0, 0, 1, 2, 3, 4], dtype=np.intp) + tm.assert_index_equal(res, eres) + tm.assert_numpy_array_equal(lidx, elidx) + tm.assert_numpy_array_equal(ridx, eridx) + + def test_join_non_int_index(self): + index = Index(range(0, 20, 2), dtype=np.int64) + other = Index([3, 6, 7, 8, 10], dtype=object) + + outer = index.join(other, how="outer") + outer2 = other.join(index, how="outer") + expected = Index([0, 2, 3, 4, 6, 7, 8, 10, 12, 14, 16, 18]) + tm.assert_index_equal(outer, outer2) + tm.assert_index_equal(outer, expected) + + inner = index.join(other, how="inner") + inner2 = other.join(index, how="inner") + expected = Index([6, 8, 10]) + tm.assert_index_equal(inner, inner2) + tm.assert_index_equal(inner, expected) + + left = index.join(other, how="left") + tm.assert_index_equal(left, index.astype(object)) + + left2 = other.join(index, how="left") + tm.assert_index_equal(left2, other) + + right = index.join(other, how="right") + tm.assert_index_equal(right, other) + + right2 = other.join(index, how="right") + tm.assert_index_equal(right2, index.astype(object)) + + def test_join_outer(self): + index = Index(range(0, 20, 2), dtype=np.int64) + other = Index([7, 12, 25, 1, 2, 5], dtype=np.int64) + other_mono = Index([1, 2, 5, 7, 12, 25], dtype=np.int64) + + # not monotonic + # guarantee of sortedness + res, lidx, ridx = index.join(other, how="outer", return_indexers=True) + noidx_res = index.join(other, how="outer") + tm.assert_index_equal(res, noidx_res) + + eres = Index([0, 1, 2, 4, 5, 6, 7, 8, 10, 12, 14, 16, 18, 25], dtype=np.int64) + elidx = np.array([0, -1, 1, 2, -1, 3, -1, 4, 5, 6, 7, 8, 9, -1], dtype=np.intp) + eridx = np.array( + [-1, 3, 4, -1, 5, -1, 0, -1, -1, 1, -1, -1, -1, 2], dtype=np.intp + ) + + assert isinstance(res, Index) and res.dtype == np.int64 + tm.assert_index_equal(res, eres) + tm.assert_numpy_array_equal(lidx, elidx) + tm.assert_numpy_array_equal(ridx, eridx) + + # monotonic + res, lidx, ridx = index.join(other_mono, how="outer", return_indexers=True) + noidx_res = index.join(other_mono, how="outer") + tm.assert_index_equal(res, noidx_res) + + elidx = np.array([0, -1, 1, 2, -1, 3, -1, 4, 5, 6, 7, 8, 9, -1], dtype=np.intp) + eridx = np.array( + [-1, 0, 1, -1, 2, -1, 3, -1, -1, 4, -1, -1, -1, 5], dtype=np.intp + ) + assert isinstance(res, Index) and res.dtype == np.int64 + tm.assert_index_equal(res, eres) + tm.assert_numpy_array_equal(lidx, elidx) + tm.assert_numpy_array_equal(ridx, eridx) + + +class TestJoinUInt64Index: + @pytest.fixture + def index_large(self): + # large values used in TestUInt64Index where no compat needed with int64/float64 + large = [2**63, 2**63 + 10, 2**63 + 15, 2**63 + 20, 2**63 + 25] + return Index(large, dtype=np.uint64) + + def test_join_inner(self, index_large): + other = Index(2**63 + np.array([7, 12, 25, 1, 2, 10], dtype="uint64")) + other_mono = Index(2**63 + np.array([1, 2, 7, 10, 12, 25], dtype="uint64")) + + # not monotonic + res, lidx, ridx = index_large.join(other, how="inner", return_indexers=True) + + # no guarantee of sortedness, so sort for comparison purposes + ind = res.argsort() + res = res.take(ind) + lidx = lidx.take(ind) + ridx = ridx.take(ind) + + eres = Index(2**63 + np.array([10, 25], dtype="uint64")) + elidx = np.array([1, 4], dtype=np.intp) + eridx = np.array([5, 2], dtype=np.intp) + + assert isinstance(res, Index) and res.dtype == np.uint64 + tm.assert_index_equal(res, eres) + tm.assert_numpy_array_equal(lidx, elidx) + tm.assert_numpy_array_equal(ridx, eridx) + + # monotonic + res, lidx, ridx = index_large.join( + other_mono, how="inner", return_indexers=True + ) + + res2 = index_large.intersection(other_mono) + tm.assert_index_equal(res, res2) + + elidx = np.array([1, 4], dtype=np.intp) + eridx = np.array([3, 5], dtype=np.intp) + + assert isinstance(res, Index) and res.dtype == np.uint64 + tm.assert_index_equal(res, eres) + tm.assert_numpy_array_equal(lidx, elidx) + tm.assert_numpy_array_equal(ridx, eridx) + + def test_join_left(self, index_large): + other = Index(2**63 + np.array([7, 12, 25, 1, 2, 10], dtype="uint64")) + other_mono = Index(2**63 + np.array([1, 2, 7, 10, 12, 25], dtype="uint64")) + + # not monotonic + res, lidx, ridx = index_large.join(other, how="left", return_indexers=True) + eres = index_large + eridx = np.array([-1, 5, -1, -1, 2], dtype=np.intp) + + assert isinstance(res, Index) and res.dtype == np.uint64 + tm.assert_index_equal(res, eres) + assert lidx is None + tm.assert_numpy_array_equal(ridx, eridx) + + # monotonic + res, lidx, ridx = index_large.join(other_mono, how="left", return_indexers=True) + eridx = np.array([-1, 3, -1, -1, 5], dtype=np.intp) + + assert isinstance(res, Index) and res.dtype == np.uint64 + tm.assert_index_equal(res, eres) + assert lidx is None + tm.assert_numpy_array_equal(ridx, eridx) + + # non-unique + idx = Index(2**63 + np.array([1, 1, 2, 5], dtype="uint64")) + idx2 = Index(2**63 + np.array([1, 2, 5, 7, 9], dtype="uint64")) + res, lidx, ridx = idx2.join(idx, how="left", return_indexers=True) + + # 1 is in idx2, so it should be x2 + eres = Index(2**63 + np.array([1, 1, 2, 5, 7, 9], dtype="uint64")) + eridx = np.array([0, 1, 2, 3, -1, -1], dtype=np.intp) + elidx = np.array([0, 0, 1, 2, 3, 4], dtype=np.intp) + + tm.assert_index_equal(res, eres) + tm.assert_numpy_array_equal(lidx, elidx) + tm.assert_numpy_array_equal(ridx, eridx) + + def test_join_right(self, index_large): + other = Index(2**63 + np.array([7, 12, 25, 1, 2, 10], dtype="uint64")) + other_mono = Index(2**63 + np.array([1, 2, 7, 10, 12, 25], dtype="uint64")) + + # not monotonic + res, lidx, ridx = index_large.join(other, how="right", return_indexers=True) + eres = other + elidx = np.array([-1, -1, 4, -1, -1, 1], dtype=np.intp) + + tm.assert_numpy_array_equal(lidx, elidx) + assert isinstance(other, Index) and other.dtype == np.uint64 + tm.assert_index_equal(res, eres) + assert ridx is None + + # monotonic + res, lidx, ridx = index_large.join( + other_mono, how="right", return_indexers=True + ) + eres = other_mono + elidx = np.array([-1, -1, -1, 1, -1, 4], dtype=np.intp) + + assert isinstance(other, Index) and other.dtype == np.uint64 + tm.assert_numpy_array_equal(lidx, elidx) + tm.assert_index_equal(res, eres) + assert ridx is None + + # non-unique + idx = Index(2**63 + np.array([1, 1, 2, 5], dtype="uint64")) + idx2 = Index(2**63 + np.array([1, 2, 5, 7, 9], dtype="uint64")) + res, lidx, ridx = idx.join(idx2, how="right", return_indexers=True) + + # 1 is in idx2, so it should be x2 + eres = Index(2**63 + np.array([1, 1, 2, 5, 7, 9], dtype="uint64")) + elidx = np.array([0, 1, 2, 3, -1, -1], dtype=np.intp) + eridx = np.array([0, 0, 1, 2, 3, 4], dtype=np.intp) + + tm.assert_index_equal(res, eres) + tm.assert_numpy_array_equal(lidx, elidx) + tm.assert_numpy_array_equal(ridx, eridx) + + def test_join_non_int_index(self, index_large): + other = Index( + 2**63 + np.array([1, 5, 7, 10, 20], dtype="uint64"), dtype=object + ) + + outer = index_large.join(other, how="outer") + outer2 = other.join(index_large, how="outer") + expected = Index( + 2**63 + np.array([0, 1, 5, 7, 10, 15, 20, 25], dtype="uint64") + ) + tm.assert_index_equal(outer, outer2) + tm.assert_index_equal(outer, expected) + + inner = index_large.join(other, how="inner") + inner2 = other.join(index_large, how="inner") + expected = Index(2**63 + np.array([10, 20], dtype="uint64")) + tm.assert_index_equal(inner, inner2) + tm.assert_index_equal(inner, expected) + + left = index_large.join(other, how="left") + tm.assert_index_equal(left, index_large.astype(object)) + + left2 = other.join(index_large, how="left") + tm.assert_index_equal(left2, other) + + right = index_large.join(other, how="right") + tm.assert_index_equal(right, other) + + right2 = other.join(index_large, how="right") + tm.assert_index_equal(right2, index_large.astype(object)) + + def test_join_outer(self, index_large): + other = Index(2**63 + np.array([7, 12, 25, 1, 2, 10], dtype="uint64")) + other_mono = Index(2**63 + np.array([1, 2, 7, 10, 12, 25], dtype="uint64")) + + # not monotonic + # guarantee of sortedness + res, lidx, ridx = index_large.join(other, how="outer", return_indexers=True) + noidx_res = index_large.join(other, how="outer") + tm.assert_index_equal(res, noidx_res) + + eres = Index( + 2**63 + np.array([0, 1, 2, 7, 10, 12, 15, 20, 25], dtype="uint64") + ) + elidx = np.array([0, -1, -1, -1, 1, -1, 2, 3, 4], dtype=np.intp) + eridx = np.array([-1, 3, 4, 0, 5, 1, -1, -1, 2], dtype=np.intp) + + assert isinstance(res, Index) and res.dtype == np.uint64 + tm.assert_index_equal(res, eres) + tm.assert_numpy_array_equal(lidx, elidx) + tm.assert_numpy_array_equal(ridx, eridx) + + # monotonic + res, lidx, ridx = index_large.join( + other_mono, how="outer", return_indexers=True + ) + noidx_res = index_large.join(other_mono, how="outer") + tm.assert_index_equal(res, noidx_res) + + elidx = np.array([0, -1, -1, -1, 1, -1, 2, 3, 4], dtype=np.intp) + eridx = np.array([-1, 0, 1, 2, 3, 4, -1, -1, 5], dtype=np.intp) + + assert isinstance(res, Index) and res.dtype == np.uint64 + tm.assert_index_equal(res, eres) + tm.assert_numpy_array_equal(lidx, elidx) + tm.assert_numpy_array_equal(ridx, eridx) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/test_numeric.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/test_numeric.py new file mode 100644 index 0000000000000000000000000000000000000000..4fd807e1827ddc4faf900f15dcefa18c08d4cd0b --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/test_numeric.py @@ -0,0 +1,553 @@ +import numpy as np +import pytest + +import pandas as pd +from pandas import ( + Index, + Series, +) +import pandas._testing as tm + + +class TestFloatNumericIndex: + @pytest.fixture(params=[np.float64, np.float32]) + def dtype(self, request): + return request.param + + @pytest.fixture + def simple_index(self, dtype): + values = np.arange(5, dtype=dtype) + return Index(values) + + @pytest.fixture( + params=[ + [1.5, 2, 3, 4, 5], + [0.0, 2.5, 5.0, 7.5, 10.0], + [5, 4, 3, 2, 1.5], + [10.0, 7.5, 5.0, 2.5, 0.0], + ], + ids=["mixed", "float", "mixed_dec", "float_dec"], + ) + def index(self, request, dtype): + return Index(request.param, dtype=dtype) + + @pytest.fixture + def mixed_index(self, dtype): + return Index([1.5, 2, 3, 4, 5], dtype=dtype) + + @pytest.fixture + def float_index(self, dtype): + return Index([0.0, 2.5, 5.0, 7.5, 10.0], dtype=dtype) + + def test_repr_roundtrip(self, index): + tm.assert_index_equal(eval(repr(index)), index, exact=True) + + def check_coerce(self, a, b, is_float_index=True): + assert a.equals(b) + tm.assert_index_equal(a, b, exact=False) + if is_float_index: + assert isinstance(b, Index) + else: + assert type(b) is Index + + def test_constructor_from_list_no_dtype(self): + index = Index([1.5, 2.5, 3.5]) + assert index.dtype == np.float64 + + def test_constructor(self, dtype): + index_cls = Index + + # explicit construction + index = index_cls([1, 2, 3, 4, 5], dtype=dtype) + + assert isinstance(index, index_cls) + assert index.dtype == dtype + + expected = np.array([1, 2, 3, 4, 5], dtype=dtype) + tm.assert_numpy_array_equal(index.values, expected) + + index = index_cls(np.array([1, 2, 3, 4, 5]), dtype=dtype) + assert isinstance(index, index_cls) + assert index.dtype == dtype + + index = index_cls([1.0, 2, 3, 4, 5], dtype=dtype) + assert isinstance(index, index_cls) + assert index.dtype == dtype + + index = index_cls(np.array([1.0, 2, 3, 4, 5]), dtype=dtype) + assert isinstance(index, index_cls) + assert index.dtype == dtype + + index = index_cls([1.0, 2, 3, 4, 5], dtype=dtype) + assert isinstance(index, index_cls) + assert index.dtype == dtype + + index = index_cls(np.array([1.0, 2, 3, 4, 5]), dtype=dtype) + assert isinstance(index, index_cls) + assert index.dtype == dtype + + # nan handling + result = index_cls([np.nan, np.nan], dtype=dtype) + assert pd.isna(result.values).all() + + result = index_cls(np.array([np.nan]), dtype=dtype) + assert pd.isna(result.values).all() + + def test_constructor_invalid(self): + index_cls = Index + cls_name = index_cls.__name__ + # invalid + msg = ( + rf"{cls_name}\(\.\.\.\) must be called with a collection of " + r"some kind, 0\.0 was passed" + ) + with pytest.raises(TypeError, match=msg): + index_cls(0.0) + + def test_constructor_coerce(self, mixed_index, float_index): + self.check_coerce(mixed_index, Index([1.5, 2, 3, 4, 5])) + self.check_coerce(float_index, Index(np.arange(5) * 2.5)) + + result = Index(np.array(np.arange(5) * 2.5, dtype=object)) + assert result.dtype == object # as of 2.0 to match Series + self.check_coerce(float_index, result.astype("float64")) + + def test_constructor_explicit(self, mixed_index, float_index): + # these don't auto convert + self.check_coerce( + float_index, Index((np.arange(5) * 2.5), dtype=object), is_float_index=False + ) + self.check_coerce( + mixed_index, Index([1.5, 2, 3, 4, 5], dtype=object), is_float_index=False + ) + + def test_type_coercion_fail(self, any_int_numpy_dtype): + # see gh-15832 + msg = "Trying to coerce float values to integers" + with pytest.raises(ValueError, match=msg): + Index([1, 2, 3.5], dtype=any_int_numpy_dtype) + + def test_equals_numeric(self): + index_cls = Index + + idx = index_cls([1.0, 2.0]) + assert idx.equals(idx) + assert idx.identical(idx) + + idx2 = index_cls([1.0, 2.0]) + assert idx.equals(idx2) + + idx = index_cls([1.0, np.nan]) + assert idx.equals(idx) + assert idx.identical(idx) + + idx2 = index_cls([1.0, np.nan]) + assert idx.equals(idx2) + + @pytest.mark.parametrize( + "other", + ( + Index([1, 2], dtype=np.int64), + Index([1.0, 2.0], dtype=object), + Index([1, 2], dtype=object), + ), + ) + def test_equals_numeric_other_index_type(self, other): + idx = Index([1.0, 2.0]) + assert idx.equals(other) + assert other.equals(idx) + + @pytest.mark.parametrize( + "vals", + [ + pd.date_range("2016-01-01", periods=3), + pd.timedelta_range("1 Day", periods=3), + ], + ) + def test_lookups_datetimelike_values(self, vals, dtype): + # If we have datetime64 or timedelta64 values, make sure they are + # wrapped correctly GH#31163 + ser = Series(vals, index=range(3, 6)) + ser.index = ser.index.astype(dtype) + + expected = vals[1] + + result = ser[4.0] + assert isinstance(result, type(expected)) and result == expected + result = ser[4] + assert isinstance(result, type(expected)) and result == expected + + result = ser.loc[4.0] + assert isinstance(result, type(expected)) and result == expected + result = ser.loc[4] + assert isinstance(result, type(expected)) and result == expected + + result = ser.at[4.0] + assert isinstance(result, type(expected)) and result == expected + # GH#31329 .at[4] should cast to 4.0, matching .loc behavior + result = ser.at[4] + assert isinstance(result, type(expected)) and result == expected + + result = ser.iloc[1] + assert isinstance(result, type(expected)) and result == expected + + result = ser.iat[1] + assert isinstance(result, type(expected)) and result == expected + + def test_doesnt_contain_all_the_things(self): + idx = Index([np.nan]) + assert not idx.isin([0]).item() + assert not idx.isin([1]).item() + assert idx.isin([np.nan]).item() + + def test_nan_multiple_containment(self): + index_cls = Index + + idx = index_cls([1.0, np.nan]) + tm.assert_numpy_array_equal(idx.isin([1.0]), np.array([True, False])) + tm.assert_numpy_array_equal(idx.isin([2.0, np.pi]), np.array([False, False])) + tm.assert_numpy_array_equal(idx.isin([np.nan]), np.array([False, True])) + tm.assert_numpy_array_equal(idx.isin([1.0, np.nan]), np.array([True, True])) + idx = index_cls([1.0, 2.0]) + tm.assert_numpy_array_equal(idx.isin([np.nan]), np.array([False, False])) + + def test_fillna_float64(self): + index_cls = Index + # GH 11343 + idx = Index([1.0, np.nan, 3.0], dtype=float, name="x") + # can't downcast + exp = Index([1.0, 0.1, 3.0], name="x") + tm.assert_index_equal(idx.fillna(0.1), exp, exact=True) + + # downcast + exp = index_cls([1.0, 2.0, 3.0], name="x") + tm.assert_index_equal(idx.fillna(2), exp) + + # object + exp = Index([1.0, "obj", 3.0], name="x") + tm.assert_index_equal(idx.fillna("obj"), exp, exact=True) + + def test_logical_compat(self, simple_index): + idx = simple_index + assert idx.all() == idx.values.all() + assert idx.any() == idx.values.any() + + assert idx.all() == idx.to_series().all() + assert idx.any() == idx.to_series().any() + + +class TestNumericInt: + @pytest.fixture(params=[np.int64, np.int32, np.int16, np.int8, np.uint64]) + def dtype(self, request): + return request.param + + @pytest.fixture + def simple_index(self, dtype): + return Index(range(0, 20, 2), dtype=dtype) + + def test_is_monotonic(self): + index_cls = Index + + index = index_cls([1, 2, 3, 4]) + assert index.is_monotonic_increasing is True + assert index.is_monotonic_increasing is True + assert index._is_strictly_monotonic_increasing is True + assert index.is_monotonic_decreasing is False + assert index._is_strictly_monotonic_decreasing is False + + index = index_cls([4, 3, 2, 1]) + assert index.is_monotonic_increasing is False + assert index._is_strictly_monotonic_increasing is False + assert index._is_strictly_monotonic_decreasing is True + + index = index_cls([1]) + assert index.is_monotonic_increasing is True + assert index.is_monotonic_increasing is True + assert index.is_monotonic_decreasing is True + assert index._is_strictly_monotonic_increasing is True + assert index._is_strictly_monotonic_decreasing is True + + def test_is_strictly_monotonic(self): + index_cls = Index + + index = index_cls([1, 1, 2, 3]) + assert index.is_monotonic_increasing is True + assert index._is_strictly_monotonic_increasing is False + + index = index_cls([3, 2, 1, 1]) + assert index.is_monotonic_decreasing is True + assert index._is_strictly_monotonic_decreasing is False + + index = index_cls([1, 1]) + assert index.is_monotonic_increasing + assert index.is_monotonic_decreasing + assert not index._is_strictly_monotonic_increasing + assert not index._is_strictly_monotonic_decreasing + + def test_logical_compat(self, simple_index): + idx = simple_index + assert idx.all() == idx.values.all() + assert idx.any() == idx.values.any() + + def test_identical(self, simple_index, dtype): + index = simple_index + + idx = Index(index.copy()) + assert idx.identical(index) + + same_values_different_type = Index(idx, dtype=object) + assert not idx.identical(same_values_different_type) + + idx = index.astype(dtype=object) + idx = idx.rename("foo") + same_values = Index(idx, dtype=object) + assert same_values.identical(idx) + + assert not idx.identical(index) + assert Index(same_values, name="foo", dtype=object).identical(idx) + + assert not index.astype(dtype=object).identical(index.astype(dtype=dtype)) + + def test_cant_or_shouldnt_cast(self, dtype): + msg = r"invalid literal for int\(\) with base 10: 'foo'" + + # can't + data = ["foo", "bar", "baz"] + with pytest.raises(ValueError, match=msg): + Index(data, dtype=dtype) + + def test_view_index(self, simple_index): + index = simple_index + msg = "Passing a type in .*Index.view is deprecated" + with tm.assert_produces_warning(FutureWarning, match=msg): + index.view(Index) + + def test_prevent_casting(self, simple_index): + index = simple_index + result = index.astype("O") + assert result.dtype == np.object_ + + +class TestIntNumericIndex: + @pytest.fixture(params=[np.int64, np.int32, np.int16, np.int8]) + def dtype(self, request): + return request.param + + def test_constructor_from_list_no_dtype(self): + index = Index([1, 2, 3]) + assert index.dtype == np.int64 + + def test_constructor(self, dtype): + index_cls = Index + + # scalar raise Exception + msg = ( + rf"{index_cls.__name__}\(\.\.\.\) must be called with a collection of some " + "kind, 5 was passed" + ) + with pytest.raises(TypeError, match=msg): + index_cls(5) + + # copy + # pass list, coerce fine + index = index_cls([-5, 0, 1, 2], dtype=dtype) + arr = index.values.copy() + new_index = index_cls(arr, copy=True) + tm.assert_index_equal(new_index, index, exact=True) + val = int(arr[0]) + 3000 + + # this should not change index + if dtype != np.int8: + # NEP 50 won't allow assignment that would overflow + arr[0] = val + assert new_index[0] != val + + if dtype == np.int64: + # pass list, coerce fine + index = index_cls([-5, 0, 1, 2], dtype=dtype) + expected = Index([-5, 0, 1, 2], dtype=dtype) + tm.assert_index_equal(index, expected) + + # from iterable + index = index_cls(iter([-5, 0, 1, 2]), dtype=dtype) + expected = index_cls([-5, 0, 1, 2], dtype=dtype) + tm.assert_index_equal(index, expected, exact=True) + + # interpret list-like + expected = index_cls([5, 0], dtype=dtype) + for cls in [Index, index_cls]: + for idx in [ + cls([5, 0], dtype=dtype), + cls(np.array([5, 0]), dtype=dtype), + cls(Series([5, 0]), dtype=dtype), + ]: + tm.assert_index_equal(idx, expected) + + def test_constructor_corner(self, dtype): + index_cls = Index + + arr = np.array([1, 2, 3, 4], dtype=object) + + index = index_cls(arr, dtype=dtype) + assert index.values.dtype == index.dtype + if dtype == np.int64: + without_dtype = Index(arr) + # as of 2.0 we do not infer a dtype when we get an object-dtype + # ndarray of numbers, matching Series behavior + assert without_dtype.dtype == object + + tm.assert_index_equal(index, without_dtype.astype(np.int64)) + + # preventing casting + arr = np.array([1, "2", 3, "4"], dtype=object) + msg = "Trying to coerce float values to integers" + with pytest.raises(ValueError, match=msg): + index_cls(arr, dtype=dtype) + + def test_constructor_coercion_signed_to_unsigned( + self, + any_unsigned_int_numpy_dtype, + ): + # see gh-15832 + msg = "|".join( + [ + "Trying to coerce negative values to unsigned integers", + "The elements provided in the data cannot all be casted", + ] + ) + with pytest.raises(OverflowError, match=msg): + Index([-1], dtype=any_unsigned_int_numpy_dtype) + + def test_constructor_np_signed(self, any_signed_int_numpy_dtype): + # GH#47475 + scalar = np.dtype(any_signed_int_numpy_dtype).type(1) + result = Index([scalar]) + expected = Index([1], dtype=any_signed_int_numpy_dtype) + tm.assert_index_equal(result, expected, exact=True) + + def test_constructor_np_unsigned(self, any_unsigned_int_numpy_dtype): + # GH#47475 + scalar = np.dtype(any_unsigned_int_numpy_dtype).type(1) + result = Index([scalar]) + expected = Index([1], dtype=any_unsigned_int_numpy_dtype) + tm.assert_index_equal(result, expected, exact=True) + + def test_coerce_list(self): + # coerce things + arr = Index([1, 2, 3, 4]) + assert isinstance(arr, Index) + + # but not if explicit dtype passed + arr = Index([1, 2, 3, 4], dtype=object) + assert type(arr) is Index + + +class TestFloat16Index: + # float 16 indexes not supported + # GH 49535 + def test_constructor(self): + index_cls = Index + dtype = np.float16 + + msg = "float16 indexes are not supported" + + # explicit construction + with pytest.raises(NotImplementedError, match=msg): + index_cls([1, 2, 3, 4, 5], dtype=dtype) + + with pytest.raises(NotImplementedError, match=msg): + index_cls(np.array([1, 2, 3, 4, 5]), dtype=dtype) + + with pytest.raises(NotImplementedError, match=msg): + index_cls([1.0, 2, 3, 4, 5], dtype=dtype) + + with pytest.raises(NotImplementedError, match=msg): + index_cls(np.array([1.0, 2, 3, 4, 5]), dtype=dtype) + + with pytest.raises(NotImplementedError, match=msg): + index_cls([1.0, 2, 3, 4, 5], dtype=dtype) + + with pytest.raises(NotImplementedError, match=msg): + index_cls(np.array([1.0, 2, 3, 4, 5]), dtype=dtype) + + # nan handling + with pytest.raises(NotImplementedError, match=msg): + index_cls([np.nan, np.nan], dtype=dtype) + + with pytest.raises(NotImplementedError, match=msg): + index_cls(np.array([np.nan]), dtype=dtype) + + +@pytest.mark.parametrize( + "box", + [list, lambda x: np.array(x, dtype=object), lambda x: Index(x, dtype=object)], +) +def test_uint_index_does_not_convert_to_float64(box): + # https://github.com/pandas-dev/pandas/issues/28279 + # https://github.com/pandas-dev/pandas/issues/28023 + series = Series( + [0, 1, 2, 3, 4, 5], + index=[ + 7606741985629028552, + 17876870360202815256, + 17876870360202815256, + 13106359306506049338, + 8991270399732411471, + 8991270399732411472, + ], + ) + + result = series.loc[box([7606741985629028552, 17876870360202815256])] + + expected = Index( + [7606741985629028552, 17876870360202815256, 17876870360202815256], + dtype="uint64", + ) + tm.assert_index_equal(result.index, expected) + + tm.assert_equal(result, series.iloc[:3]) + + +def test_float64_index_equals(): + # https://github.com/pandas-dev/pandas/issues/35217 + float_index = Index([1.0, 2, 3]) + string_index = Index(["1", "2", "3"]) + + result = float_index.equals(string_index) + assert result is False + + result = string_index.equals(float_index) + assert result is False + + +def test_map_dtype_inference_unsigned_to_signed(): + # GH#44609 cases where we don't retain dtype + idx = Index([1, 2, 3], dtype=np.uint64) + result = idx.map(lambda x: -x) + expected = Index([-1, -2, -3], dtype=np.int64) + tm.assert_index_equal(result, expected) + + +def test_map_dtype_inference_overflows(): + # GH#44609 case where we have to upcast + idx = Index(np.array([1, 2, 3], dtype=np.int8)) + result = idx.map(lambda x: x * 1000) + # TODO: we could plausibly try to infer down to int16 here + expected = Index([1000, 2000, 3000], dtype=np.int64) + tm.assert_index_equal(result, expected) + + +def test_view_to_datetimelike(): + # GH#55710 + idx = Index([1, 2, 3]) + res = idx.view("m8[s]") + expected = pd.TimedeltaIndex(idx.values.view("m8[s]")) + tm.assert_index_equal(res, expected) + + res2 = idx.view("m8[D]") + expected2 = idx.values.view("m8[D]") + tm.assert_numpy_array_equal(res2, expected2) + + res3 = idx.view("M8[h]") + expected3 = idx.values.view("M8[h]") + tm.assert_numpy_array_equal(res3, expected3) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/test_setops.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/test_setops.py new file mode 100644 index 0000000000000000000000000000000000000000..376b51dd98bb1b1c7c6c8a67914bc72f6c6c588d --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/numeric/test_setops.py @@ -0,0 +1,168 @@ +from datetime import ( + datetime, + timedelta, +) + +import numpy as np +import pytest + +import pandas._testing as tm +from pandas.core.indexes.api import ( + Index, + RangeIndex, +) + + +@pytest.fixture +def index_large(): + # large values used in TestUInt64Index where no compat needed with int64/float64 + large = [2**63, 2**63 + 10, 2**63 + 15, 2**63 + 20, 2**63 + 25] + return Index(large, dtype=np.uint64) + + +class TestSetOps: + @pytest.mark.parametrize("dtype", ["f8", "u8", "i8"]) + def test_union_non_numeric(self, dtype): + # corner case, non-numeric + index = Index(np.arange(5, dtype=dtype), dtype=dtype) + assert index.dtype == dtype + + other = Index([datetime.now() + timedelta(i) for i in range(4)], dtype=object) + result = index.union(other) + expected = Index(np.concatenate((index, other))) + tm.assert_index_equal(result, expected) + + result = other.union(index) + expected = Index(np.concatenate((other, index))) + tm.assert_index_equal(result, expected) + + def test_intersection(self): + index = Index(range(5), dtype=np.int64) + + other = Index([1, 2, 3, 4, 5]) + result = index.intersection(other) + expected = Index(np.sort(np.intersect1d(index.values, other.values))) + tm.assert_index_equal(result, expected) + + result = other.intersection(index) + expected = Index( + np.sort(np.asarray(np.intersect1d(index.values, other.values))) + ) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize("dtype", ["int64", "uint64"]) + def test_int_float_union_dtype(self, dtype): + # https://github.com/pandas-dev/pandas/issues/26778 + # [u]int | float -> float + index = Index([0, 2, 3], dtype=dtype) + other = Index([0.5, 1.5], dtype=np.float64) + expected = Index([0.0, 0.5, 1.5, 2.0, 3.0], dtype=np.float64) + result = index.union(other) + tm.assert_index_equal(result, expected) + + result = other.union(index) + tm.assert_index_equal(result, expected) + + def test_range_float_union_dtype(self): + # https://github.com/pandas-dev/pandas/issues/26778 + index = RangeIndex(start=0, stop=3) + other = Index([0.5, 1.5], dtype=np.float64) + result = index.union(other) + expected = Index([0.0, 0.5, 1, 1.5, 2.0], dtype=np.float64) + tm.assert_index_equal(result, expected) + + result = other.union(index) + tm.assert_index_equal(result, expected) + + def test_range_uint64_union_dtype(self): + # https://github.com/pandas-dev/pandas/issues/26778 + index = RangeIndex(start=0, stop=3) + other = Index([0, 10], dtype=np.uint64) + result = index.union(other) + expected = Index([0, 1, 2, 10], dtype=object) + tm.assert_index_equal(result, expected) + + result = other.union(index) + tm.assert_index_equal(result, expected) + + def test_float64_index_difference(self): + # https://github.com/pandas-dev/pandas/issues/35217 + float_index = Index([1.0, 2, 3]) + string_index = Index(["1", "2", "3"]) + + result = float_index.difference(string_index) + tm.assert_index_equal(result, float_index) + + result = string_index.difference(float_index) + tm.assert_index_equal(result, string_index) + + def test_intersection_uint64_outside_int64_range(self, index_large): + other = Index([2**63, 2**63 + 5, 2**63 + 10, 2**63 + 15, 2**63 + 20]) + result = index_large.intersection(other) + expected = Index(np.sort(np.intersect1d(index_large.values, other.values))) + tm.assert_index_equal(result, expected) + + result = other.intersection(index_large) + expected = Index( + np.sort(np.asarray(np.intersect1d(index_large.values, other.values))) + ) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize( + "index2,keeps_name", + [ + (Index([4, 7, 6, 5, 3], name="index"), True), + (Index([4, 7, 6, 5, 3], name="other"), False), + ], + ) + def test_intersection_monotonic(self, index2, keeps_name, sort): + index1 = Index([5, 3, 2, 4, 1], name="index") + expected = Index([5, 3, 4]) + + if keeps_name: + expected.name = "index" + + result = index1.intersection(index2, sort=sort) + if sort is None: + expected = expected.sort_values() + tm.assert_index_equal(result, expected) + + def test_symmetric_difference(self, sort): + # smoke + index1 = Index([5, 2, 3, 4], name="index1") + index2 = Index([2, 3, 4, 1]) + result = index1.symmetric_difference(index2, sort=sort) + expected = Index([5, 1]) + if sort is not None: + tm.assert_index_equal(result, expected) + else: + tm.assert_index_equal(result, expected.sort_values()) + assert result.name is None + if sort is None: + expected = expected.sort_values() + tm.assert_index_equal(result, expected) + + +class TestSetOpsSort: + @pytest.mark.parametrize("slice_", [slice(None), slice(0)]) + def test_union_sort_other_special(self, slice_): + # https://github.com/pandas-dev/pandas/issues/24959 + + idx = Index([1, 0, 2]) + # default, sort=None + other = idx[slice_] + tm.assert_index_equal(idx.union(other), idx) + tm.assert_index_equal(other.union(idx), idx) + + # sort=False + tm.assert_index_equal(idx.union(other, sort=False), idx) + + @pytest.mark.parametrize("slice_", [slice(None), slice(0)]) + def test_union_sort_special_true(self, slice_): + idx = Index([1, 0, 2]) + # default, sort=None + other = idx[slice_] + + result = idx.union(other, sort=True) + expected = Index([0, 1, 2]) + tm.assert_index_equal(result, expected) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_any_index.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_any_index.py new file mode 100644 index 0000000000000000000000000000000000000000..10204cfb78e8928dd69e0ea33ce40b02840959ed --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_any_index.py @@ -0,0 +1,172 @@ +""" +Tests that can be parametrized over _any_ Index object. +""" +import re + +import numpy as np +import pytest + +from pandas.errors import InvalidIndexError + +import pandas._testing as tm + + +def test_boolean_context_compat(index): + # GH#7897 + with pytest.raises(ValueError, match="The truth value of a"): + if index: + pass + + with pytest.raises(ValueError, match="The truth value of a"): + bool(index) + + +def test_sort(index): + msg = "cannot sort an Index object in-place, use sort_values instead" + with pytest.raises(TypeError, match=msg): + index.sort() + + +def test_hash_error(index): + with pytest.raises(TypeError, match=f"unhashable type: '{type(index).__name__}'"): + hash(index) + + +def test_mutability(index): + if not len(index): + pytest.skip("Test doesn't make sense for empty index") + msg = "Index does not support mutable operations" + with pytest.raises(TypeError, match=msg): + index[0] = index[0] + + +@pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") +def test_map_identity_mapping(index, request): + # GH#12766 + + result = index.map(lambda x: x) + if index.dtype == object and result.dtype == bool: + assert (index == result).all() + # TODO: could work that into the 'exact="equiv"'? + return # FIXME: doesn't belong in this file anymore! + tm.assert_index_equal(result, index, exact="equiv") + + +def test_wrong_number_names(index): + names = index.nlevels * ["apple", "banana", "carrot"] + with pytest.raises(ValueError, match="^Length"): + index.names = names + + +def test_view_preserves_name(index): + assert index.view().name == index.name + + +def test_ravel(index): + # GH#19956 ravel returning ndarray is deprecated, in 2.0 returns a view on self + res = index.ravel() + tm.assert_index_equal(res, index) + + +class TestConversion: + def test_to_series(self, index): + # assert that we are creating a copy of the index + + ser = index.to_series() + assert ser.values is not index.values + assert ser.index is not index + assert ser.name == index.name + + def test_to_series_with_arguments(self, index): + # GH#18699 + + # index kwarg + ser = index.to_series(index=index) + + assert ser.values is not index.values + assert ser.index is index + assert ser.name == index.name + + # name kwarg + ser = index.to_series(name="__test") + + assert ser.values is not index.values + assert ser.index is not index + assert ser.name != index.name + + def test_tolist_matches_list(self, index): + assert index.tolist() == list(index) + + +class TestRoundTrips: + def test_pickle_roundtrip(self, index): + result = tm.round_trip_pickle(index) + tm.assert_index_equal(result, index, exact=True) + if result.nlevels > 1: + # GH#8367 round-trip with timezone + assert index.equal_levels(result) + + def test_pickle_preserves_name(self, index): + original_name, index.name = index.name, "foo" + unpickled = tm.round_trip_pickle(index) + assert index.equals(unpickled) + index.name = original_name + + +class TestIndexing: + def test_get_loc_listlike_raises_invalid_index_error(self, index): + # and never TypeError + key = np.array([0, 1], dtype=np.intp) + + with pytest.raises(InvalidIndexError, match=r"\[0 1\]"): + index.get_loc(key) + + with pytest.raises(InvalidIndexError, match=r"\[False True\]"): + index.get_loc(key.astype(bool)) + + def test_getitem_ellipsis(self, index): + # GH#21282 + result = index[...] + assert result.equals(index) + assert result is not index + + def test_slice_keeps_name(self, index): + assert index.name == index[1:].name + + @pytest.mark.parametrize("item", [101, "no_int", 2.5]) + def test_getitem_error(self, index, item): + msg = "|".join( + [ + r"index 101 is out of bounds for axis 0 with size [\d]+", + re.escape( + "only integers, slices (`:`), ellipsis (`...`), " + "numpy.newaxis (`None`) and integer or boolean arrays " + "are valid indices" + ), + "index out of bounds", # string[pyarrow] + ] + ) + with pytest.raises(IndexError, match=msg): + index[item] + + +class TestRendering: + def test_str(self, index): + # test the string repr + index.name = "foo" + assert "'foo'" in str(index) + assert type(index).__name__ in str(index) + + +class TestReductions: + def test_argmax_axis_invalid(self, index): + # GH#23081 + msg = r"`axis` must be fewer than the number of dimensions \(1\)" + with pytest.raises(ValueError, match=msg): + index.argmax(axis=1) + with pytest.raises(ValueError, match=msg): + index.argmin(axis=2) + with pytest.raises(ValueError, match=msg): + index.min(axis=-2) + with pytest.raises(ValueError, match=msg): + index.max(axis=-3) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_base.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_base.py new file mode 100644 index 0000000000000000000000000000000000000000..7eeb626d91dc8e19ec7768dc80bb9b08472c5b41 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_base.py @@ -0,0 +1,1737 @@ +from collections import defaultdict +from datetime import datetime +from functools import partial +import math +import operator +import re + +import numpy as np +import pytest + +from pandas.compat import IS64 +from pandas.errors import InvalidIndexError +import pandas.util._test_decorators as td + +from pandas.core.dtypes.common import ( + is_any_real_numeric_dtype, + is_numeric_dtype, + is_object_dtype, +) + +import pandas as pd +from pandas import ( + CategoricalIndex, + DataFrame, + DatetimeIndex, + IntervalIndex, + PeriodIndex, + RangeIndex, + Series, + TimedeltaIndex, + date_range, + period_range, + timedelta_range, +) +import pandas._testing as tm +from pandas.core.indexes.api import ( + Index, + MultiIndex, + _get_combined_index, + ensure_index, + ensure_index_from_sequences, +) + + +class TestIndex: + @pytest.fixture + def simple_index(self) -> Index: + return Index(list("abcde")) + + def test_can_hold_identifiers(self, simple_index): + index = simple_index + key = index[0] + assert index._can_hold_identifiers_and_holds_name(key) is True + + @pytest.mark.parametrize("index", ["datetime"], indirect=True) + def test_new_axis(self, index): + # TODO: a bunch of scattered tests check this deprecation is enforced. + # de-duplicate/centralize them. + with pytest.raises(ValueError, match="Multi-dimensional indexing"): + # GH#30588 multi-dimensional indexing deprecated + index[None, :] + + def test_constructor_regular(self, index): + tm.assert_contains_all(index, index) + + @pytest.mark.parametrize("index", ["string"], indirect=True) + def test_constructor_casting(self, index): + # casting + arr = np.array(index) + new_index = Index(arr) + tm.assert_contains_all(arr, new_index) + tm.assert_index_equal(index, new_index) + + def test_constructor_copy(self, using_infer_string): + index = Index(list("abc"), name="name") + arr = np.array(index) + new_index = Index(arr, copy=True, name="name") + assert isinstance(new_index, Index) + assert new_index.name == "name" + if using_infer_string: + tm.assert_extension_array_equal( + new_index.values, pd.array(arr, dtype="string[pyarrow_numpy]") + ) + else: + tm.assert_numpy_array_equal(arr, new_index.values) + arr[0] = "SOMEBIGLONGSTRING" + assert new_index[0] != "SOMEBIGLONGSTRING" + + @pytest.mark.parametrize("cast_as_obj", [True, False]) + @pytest.mark.parametrize( + "index", + [ + date_range( + "2015-01-01 10:00", + freq="D", + periods=3, + tz="US/Eastern", + name="Green Eggs & Ham", + ), # DTI with tz + date_range("2015-01-01 10:00", freq="D", periods=3), # DTI no tz + timedelta_range("1 days", freq="D", periods=3), # td + period_range("2015-01-01", freq="D", periods=3), # period + ], + ) + def test_constructor_from_index_dtlike(self, cast_as_obj, index): + if cast_as_obj: + with tm.assert_produces_warning(FutureWarning, match="Dtype inference"): + result = Index(index.astype(object)) + else: + result = Index(index) + + tm.assert_index_equal(result, index) + + if isinstance(index, DatetimeIndex): + assert result.tz == index.tz + if cast_as_obj: + # GH#23524 check that Index(dti, dtype=object) does not + # incorrectly raise ValueError, and that nanoseconds are not + # dropped + index += pd.Timedelta(nanoseconds=50) + result = Index(index, dtype=object) + assert result.dtype == np.object_ + assert list(result) == list(index) + + @pytest.mark.parametrize( + "index,has_tz", + [ + ( + date_range("2015-01-01 10:00", freq="D", periods=3, tz="US/Eastern"), + True, + ), # datetimetz + (timedelta_range("1 days", freq="D", periods=3), False), # td + (period_range("2015-01-01", freq="D", periods=3), False), # period + ], + ) + def test_constructor_from_series_dtlike(self, index, has_tz): + result = Index(Series(index)) + tm.assert_index_equal(result, index) + + if has_tz: + assert result.tz == index.tz + + def test_constructor_from_series_freq(self): + # GH 6273 + # create from a series, passing a freq + dts = ["1-1-1990", "2-1-1990", "3-1-1990", "4-1-1990", "5-1-1990"] + expected = DatetimeIndex(dts, freq="MS") + + s = Series(pd.to_datetime(dts)) + result = DatetimeIndex(s, freq="MS") + + tm.assert_index_equal(result, expected) + + def test_constructor_from_frame_series_freq(self, using_infer_string): + # GH 6273 + # create from a series, passing a freq + dts = ["1-1-1990", "2-1-1990", "3-1-1990", "4-1-1990", "5-1-1990"] + expected = DatetimeIndex(dts, freq="MS") + + df = DataFrame(np.random.default_rng(2).random((5, 3))) + df["date"] = dts + result = DatetimeIndex(df["date"], freq="MS") + dtype = object if not using_infer_string else "string" + assert df["date"].dtype == dtype + expected.name = "date" + tm.assert_index_equal(result, expected) + + expected = Series(dts, name="date") + tm.assert_series_equal(df["date"], expected) + + # GH 6274 + # infer freq of same + if not using_infer_string: + # Doesn't work with arrow strings + freq = pd.infer_freq(df["date"]) + assert freq == "MS" + + def test_constructor_int_dtype_nan(self): + # see gh-15187 + data = [np.nan] + expected = Index(data, dtype=np.float64) + result = Index(data, dtype="float") + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize( + "klass,dtype,na_val", + [ + (Index, np.float64, np.nan), + (DatetimeIndex, "datetime64[ns]", pd.NaT), + ], + ) + def test_index_ctor_infer_nan_nat(self, klass, dtype, na_val): + # GH 13467 + na_list = [na_val, na_val] + expected = klass(na_list) + assert expected.dtype == dtype + + result = Index(na_list) + tm.assert_index_equal(result, expected) + + result = Index(np.array(na_list)) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize( + "vals,dtype", + [ + ([1, 2, 3, 4, 5], "int"), + ([1.1, np.nan, 2.2, 3.0], "float"), + (["A", "B", "C", np.nan], "obj"), + ], + ) + def test_constructor_simple_new(self, vals, dtype): + index = Index(vals, name=dtype) + result = index._simple_new(index.values, dtype) + tm.assert_index_equal(result, index) + + @pytest.mark.parametrize("attr", ["values", "asi8"]) + @pytest.mark.parametrize("klass", [Index, DatetimeIndex]) + def test_constructor_dtypes_datetime(self, tz_naive_fixture, attr, klass): + # Test constructing with a datetimetz dtype + # .values produces numpy datetimes, so these are considered naive + # .asi8 produces integers, so these are considered epoch timestamps + # ^the above will be true in a later version. Right now we `.view` + # the i8 values as NS_DTYPE, effectively treating them as wall times. + index = date_range("2011-01-01", periods=5) + arg = getattr(index, attr) + index = index.tz_localize(tz_naive_fixture) + dtype = index.dtype + + # As of 2.0 astype raises on dt64.astype(dt64tz) + err = tz_naive_fixture is not None + msg = "Cannot use .astype to convert from timezone-naive dtype to" + + if attr == "asi8": + result = DatetimeIndex(arg).tz_localize(tz_naive_fixture) + tm.assert_index_equal(result, index) + elif klass is Index: + with pytest.raises(TypeError, match="unexpected keyword"): + klass(arg, tz=tz_naive_fixture) + else: + result = klass(arg, tz=tz_naive_fixture) + tm.assert_index_equal(result, index) + + if attr == "asi8": + if err: + with pytest.raises(TypeError, match=msg): + DatetimeIndex(arg).astype(dtype) + else: + result = DatetimeIndex(arg).astype(dtype) + tm.assert_index_equal(result, index) + else: + result = klass(arg, dtype=dtype) + tm.assert_index_equal(result, index) + + if attr == "asi8": + result = DatetimeIndex(list(arg)).tz_localize(tz_naive_fixture) + tm.assert_index_equal(result, index) + elif klass is Index: + with pytest.raises(TypeError, match="unexpected keyword"): + klass(arg, tz=tz_naive_fixture) + else: + result = klass(list(arg), tz=tz_naive_fixture) + tm.assert_index_equal(result, index) + + if attr == "asi8": + if err: + with pytest.raises(TypeError, match=msg): + DatetimeIndex(list(arg)).astype(dtype) + else: + result = DatetimeIndex(list(arg)).astype(dtype) + tm.assert_index_equal(result, index) + else: + result = klass(list(arg), dtype=dtype) + tm.assert_index_equal(result, index) + + @pytest.mark.parametrize("attr", ["values", "asi8"]) + @pytest.mark.parametrize("klass", [Index, TimedeltaIndex]) + def test_constructor_dtypes_timedelta(self, attr, klass): + index = timedelta_range("1 days", periods=5) + index = index._with_freq(None) # won't be preserved by constructors + dtype = index.dtype + + values = getattr(index, attr) + + result = klass(values, dtype=dtype) + tm.assert_index_equal(result, index) + + result = klass(list(values), dtype=dtype) + tm.assert_index_equal(result, index) + + @pytest.mark.parametrize("value", [[], iter([]), (_ for _ in [])]) + @pytest.mark.parametrize( + "klass", + [ + Index, + CategoricalIndex, + DatetimeIndex, + TimedeltaIndex, + ], + ) + def test_constructor_empty(self, value, klass): + empty = klass(value) + assert isinstance(empty, klass) + assert not len(empty) + + @pytest.mark.parametrize( + "empty,klass", + [ + (PeriodIndex([], freq="D"), PeriodIndex), + (PeriodIndex(iter([]), freq="D"), PeriodIndex), + (PeriodIndex((_ for _ in []), freq="D"), PeriodIndex), + (RangeIndex(step=1), RangeIndex), + (MultiIndex(levels=[[1, 2], ["blue", "red"]], codes=[[], []]), MultiIndex), + ], + ) + def test_constructor_empty_special(self, empty, klass): + assert isinstance(empty, klass) + assert not len(empty) + + @pytest.mark.parametrize( + "index", + [ + "datetime", + "float64", + "float32", + "int64", + "int32", + "period", + "range", + "repeats", + "timedelta", + "tuples", + "uint64", + "uint32", + ], + indirect=True, + ) + def test_view_with_args(self, index): + index.view("i8") + + @pytest.mark.parametrize( + "index", + [ + "string", + pytest.param("categorical", marks=pytest.mark.xfail(reason="gh-25464")), + "bool-object", + "bool-dtype", + "empty", + ], + indirect=True, + ) + def test_view_with_args_object_array_raises(self, index): + if index.dtype == bool: + msg = "When changing to a larger dtype" + with pytest.raises(ValueError, match=msg): + index.view("i8") + elif index.dtype == "string": + with pytest.raises(NotImplementedError, match="i8"): + index.view("i8") + else: + msg = ( + "Cannot change data-type for array of references|" + "Cannot change data-type for object array|" + ) + with pytest.raises(TypeError, match=msg): + index.view("i8") + + @pytest.mark.parametrize( + "index", + ["int64", "int32", "range"], + indirect=True, + ) + def test_astype(self, index): + casted = index.astype("i8") + + # it works! + casted.get_loc(5) + + # pass on name + index.name = "foobar" + casted = index.astype("i8") + assert casted.name == "foobar" + + def test_equals_object(self): + # same + assert Index(["a", "b", "c"]).equals(Index(["a", "b", "c"])) + + @pytest.mark.parametrize( + "comp", [Index(["a", "b"]), Index(["a", "b", "d"]), ["a", "b", "c"]] + ) + def test_not_equals_object(self, comp): + assert not Index(["a", "b", "c"]).equals(comp) + + def test_identical(self): + # index + i1 = Index(["a", "b", "c"]) + i2 = Index(["a", "b", "c"]) + + assert i1.identical(i2) + + i1 = i1.rename("foo") + assert i1.equals(i2) + assert not i1.identical(i2) + + i2 = i2.rename("foo") + assert i1.identical(i2) + + i3 = Index([("a", "a"), ("a", "b"), ("b", "a")]) + i4 = Index([("a", "a"), ("a", "b"), ("b", "a")], tupleize_cols=False) + assert not i3.identical(i4) + + def test_is_(self): + ind = Index(range(10)) + assert ind.is_(ind) + assert ind.is_(ind.view().view().view().view()) + assert not ind.is_(Index(range(10))) + assert not ind.is_(ind.copy()) + assert not ind.is_(ind.copy(deep=False)) + assert not ind.is_(ind[:]) + assert not ind.is_(np.array(range(10))) + + # quasi-implementation dependent + assert ind.is_(ind.view()) + ind2 = ind.view() + ind2.name = "bob" + assert ind.is_(ind2) + assert ind2.is_(ind) + # doesn't matter if Indices are *actually* views of underlying data, + assert not ind.is_(Index(ind.values)) + arr = np.array(range(1, 11)) + ind1 = Index(arr, copy=False) + ind2 = Index(arr, copy=False) + assert not ind1.is_(ind2) + + def test_asof_numeric_vs_bool_raises(self): + left = Index([1, 2, 3]) + right = Index([True, False], dtype=object) + + msg = "Cannot compare dtypes int64 and bool" + with pytest.raises(TypeError, match=msg): + left.asof(right[0]) + # TODO: should right.asof(left[0]) also raise? + + with pytest.raises(InvalidIndexError, match=re.escape(str(right))): + left.asof(right) + + with pytest.raises(InvalidIndexError, match=re.escape(str(left))): + right.asof(left) + + @pytest.mark.parametrize("index", ["string"], indirect=True) + def test_booleanindex(self, index): + bool_index = np.ones(len(index), dtype=bool) + bool_index[5:30:2] = False + + sub_index = index[bool_index] + + for i, val in enumerate(sub_index): + assert sub_index.get_loc(val) == i + + sub_index = index[list(bool_index)] + for i, val in enumerate(sub_index): + assert sub_index.get_loc(val) == i + + def test_fancy(self, simple_index): + index = simple_index + sl = index[[1, 2, 3]] + for i in sl: + assert i == sl[sl.get_loc(i)] + + @pytest.mark.parametrize( + "index", + ["string", "int64", "int32", "uint64", "uint32", "float64", "float32"], + indirect=True, + ) + @pytest.mark.parametrize("dtype", [int, np.bool_]) + def test_empty_fancy(self, index, dtype, request, using_infer_string): + if dtype is np.bool_ and using_infer_string and index.dtype == "string": + request.applymarker(pytest.mark.xfail(reason="numpy behavior is buggy")) + empty_arr = np.array([], dtype=dtype) + empty_index = type(index)([], dtype=index.dtype) + + assert index[[]].identical(empty_index) + if dtype == np.bool_: + with tm.assert_produces_warning(FutureWarning, match="is deprecated"): + assert index[empty_arr].identical(empty_index) + else: + assert index[empty_arr].identical(empty_index) + + @pytest.mark.parametrize( + "index", + ["string", "int64", "int32", "uint64", "uint32", "float64", "float32"], + indirect=True, + ) + def test_empty_fancy_raises(self, index): + # DatetimeIndex is excluded, because it overrides getitem and should + # be tested separately. + empty_farr = np.array([], dtype=np.float64) + empty_index = type(index)([], dtype=index.dtype) + + assert index[[]].identical(empty_index) + # np.ndarray only accepts ndarray of int & bool dtypes, so should Index + msg = r"arrays used as indices must be of integer" + with pytest.raises(IndexError, match=msg): + index[empty_farr] + + def test_union_dt_as_obj(self, simple_index): + # TODO: Replace with fixturesult + index = simple_index + date_index = date_range("2019-01-01", periods=10) + first_cat = index.union(date_index) + second_cat = index.union(index) + + appended = Index(np.append(index, date_index.astype("O"))) + + tm.assert_index_equal(first_cat, appended) + tm.assert_index_equal(second_cat, index) + tm.assert_contains_all(index, first_cat) + tm.assert_contains_all(index, second_cat) + tm.assert_contains_all(date_index, first_cat) + + def test_map_with_tuples(self): + # GH 12766 + + # Test that returning a single tuple from an Index + # returns an Index. + index = Index(np.arange(3), dtype=np.int64) + result = index.map(lambda x: (x,)) + expected = Index([(i,) for i in index]) + tm.assert_index_equal(result, expected) + + # Test that returning a tuple from a map of a single index + # returns a MultiIndex object. + result = index.map(lambda x: (x, x == 1)) + expected = MultiIndex.from_tuples([(i, i == 1) for i in index]) + tm.assert_index_equal(result, expected) + + def test_map_with_tuples_mi(self): + # Test that returning a single object from a MultiIndex + # returns an Index. + first_level = ["foo", "bar", "baz"] + multi_index = MultiIndex.from_tuples(zip(first_level, [1, 2, 3])) + reduced_index = multi_index.map(lambda x: x[0]) + tm.assert_index_equal(reduced_index, Index(first_level)) + + @pytest.mark.parametrize( + "index", + [ + date_range("2020-01-01", freq="D", periods=10), + period_range("2020-01-01", freq="D", periods=10), + timedelta_range("1 day", periods=10), + ], + ) + def test_map_tseries_indices_return_index(self, index): + expected = Index([1] * 10) + result = index.map(lambda x: 1) + tm.assert_index_equal(expected, result) + + def test_map_tseries_indices_accsr_return_index(self): + date_index = DatetimeIndex( + date_range("2020-01-01", periods=24, freq="h"), name="hourly" + ) + result = date_index.map(lambda x: x.hour) + expected = Index(np.arange(24, dtype="int64"), name="hourly") + tm.assert_index_equal(result, expected, exact=True) + + @pytest.mark.parametrize( + "mapper", + [ + lambda values, index: {i: e for e, i in zip(values, index)}, + lambda values, index: Series(values, index), + ], + ) + def test_map_dictlike_simple(self, mapper): + # GH 12756 + expected = Index(["foo", "bar", "baz"]) + index = Index(np.arange(3), dtype=np.int64) + result = index.map(mapper(expected.values, index)) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize( + "mapper", + [ + lambda values, index: {i: e for e, i in zip(values, index)}, + lambda values, index: Series(values, index), + ], + ) + @pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") + def test_map_dictlike(self, index, mapper, request): + # GH 12756 + if isinstance(index, CategoricalIndex): + pytest.skip("Tested in test_categorical") + elif not index.is_unique: + pytest.skip("Cannot map duplicated index") + + rng = np.arange(len(index), 0, -1, dtype=np.int64) + + if index.empty: + # to match proper result coercion for uints + expected = Index([]) + elif is_numeric_dtype(index.dtype): + expected = index._constructor(rng, dtype=index.dtype) + elif type(index) is Index and index.dtype != object: + # i.e. EA-backed, for now just Nullable + expected = Index(rng, dtype=index.dtype) + else: + expected = Index(rng) + + result = index.map(mapper(expected, index)) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize( + "mapper", + [Series(["foo", 2.0, "baz"], index=[0, 2, -1]), {0: "foo", 2: 2.0, -1: "baz"}], + ) + def test_map_with_non_function_missing_values(self, mapper): + # GH 12756 + expected = Index([2.0, np.nan, "foo"]) + result = Index([2, 1, 0]).map(mapper) + + tm.assert_index_equal(expected, result) + + def test_map_na_exclusion(self): + index = Index([1.5, np.nan, 3, np.nan, 5]) + + result = index.map(lambda x: x * 2, na_action="ignore") + expected = index * 2 + tm.assert_index_equal(result, expected) + + def test_map_defaultdict(self): + index = Index([1, 2, 3]) + default_dict = defaultdict(lambda: "blank") + default_dict[1] = "stuff" + result = index.map(default_dict) + expected = Index(["stuff", "blank", "blank"]) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize("name,expected", [("foo", "foo"), ("bar", None)]) + def test_append_empty_preserve_name(self, name, expected): + left = Index([], name="foo") + right = Index([1, 2, 3], name=name) + + msg = "The behavior of array concatenation with empty entries is deprecated" + with tm.assert_produces_warning(FutureWarning, match=msg): + result = left.append(right) + assert result.name == expected + + @pytest.mark.parametrize( + "index, expected", + [ + ("string", False), + ("bool-object", False), + ("bool-dtype", False), + ("categorical", False), + ("int64", True), + ("int32", True), + ("uint64", True), + ("uint32", True), + ("datetime", False), + ("float64", True), + ("float32", True), + ], + indirect=["index"], + ) + def test_is_numeric(self, index, expected): + assert is_any_real_numeric_dtype(index) is expected + + @pytest.mark.parametrize( + "index, expected", + [ + ("string", True), + ("bool-object", True), + ("bool-dtype", False), + ("categorical", False), + ("int64", False), + ("int32", False), + ("uint64", False), + ("uint32", False), + ("datetime", False), + ("float64", False), + ("float32", False), + ], + indirect=["index"], + ) + def test_is_object(self, index, expected, using_infer_string): + if using_infer_string and index.dtype == "string" and expected: + expected = False + assert is_object_dtype(index) is expected + + def test_summary(self, index): + index._summary() + + def test_format_bug(self): + # GH 14626 + # windows has different precision on datetime.datetime.now (it doesn't + # include us since the default for Timestamp shows these but Index + # formatting does not we are skipping) + now = datetime.now() + msg = r"Index\.format is deprecated" + + if not str(now).endswith("000"): + index = Index([now]) + with tm.assert_produces_warning(FutureWarning, match=msg): + formatted = index.format() + expected = [str(index[0])] + assert formatted == expected + + with tm.assert_produces_warning(FutureWarning, match=msg): + Index([]).format() + + @pytest.mark.parametrize("vals", [[1, 2.0 + 3.0j, 4.0], ["a", "b", "c"]]) + def test_format_missing(self, vals, nulls_fixture): + # 2845 + vals = list(vals) # Copy for each iteration + vals.append(nulls_fixture) + index = Index(vals, dtype=object) + # TODO: case with complex dtype? + + msg = r"Index\.format is deprecated" + with tm.assert_produces_warning(FutureWarning, match=msg): + formatted = index.format() + null_repr = "NaN" if isinstance(nulls_fixture, float) else str(nulls_fixture) + expected = [str(index[0]), str(index[1]), str(index[2]), null_repr] + + assert formatted == expected + assert index[3] is nulls_fixture + + @pytest.mark.parametrize("op", ["any", "all"]) + def test_logical_compat(self, op, simple_index): + index = simple_index + left = getattr(index, op)() + assert left == getattr(index.values, op)() + right = getattr(index.to_series(), op)() + # left might not match right exactly in e.g. string cases where the + # because we use np.any/all instead of .any/all + assert bool(left) == bool(right) + + @pytest.mark.parametrize( + "index", ["string", "int64", "int32", "float64", "float32"], indirect=True + ) + def test_drop_by_str_label(self, index): + n = len(index) + drop = index[list(range(5, 10))] + dropped = index.drop(drop) + + expected = index[list(range(5)) + list(range(10, n))] + tm.assert_index_equal(dropped, expected) + + dropped = index.drop(index[0]) + expected = index[1:] + tm.assert_index_equal(dropped, expected) + + @pytest.mark.parametrize( + "index", ["string", "int64", "int32", "float64", "float32"], indirect=True + ) + @pytest.mark.parametrize("keys", [["foo", "bar"], ["1", "bar"]]) + def test_drop_by_str_label_raises_missing_keys(self, index, keys): + with pytest.raises(KeyError, match=""): + index.drop(keys) + + @pytest.mark.parametrize( + "index", ["string", "int64", "int32", "float64", "float32"], indirect=True + ) + def test_drop_by_str_label_errors_ignore(self, index): + n = len(index) + drop = index[list(range(5, 10))] + mixed = drop.tolist() + ["foo"] + dropped = index.drop(mixed, errors="ignore") + + expected = index[list(range(5)) + list(range(10, n))] + tm.assert_index_equal(dropped, expected) + + dropped = index.drop(["foo", "bar"], errors="ignore") + expected = index[list(range(n))] + tm.assert_index_equal(dropped, expected) + + def test_drop_by_numeric_label_loc(self): + # TODO: Parametrize numeric and str tests after self.strIndex fixture + index = Index([1, 2, 3]) + dropped = index.drop(1) + expected = Index([2, 3]) + + tm.assert_index_equal(dropped, expected) + + def test_drop_by_numeric_label_raises_missing_keys(self): + index = Index([1, 2, 3]) + with pytest.raises(KeyError, match=""): + index.drop([3, 4]) + + @pytest.mark.parametrize( + "key,expected", [(4, Index([1, 2, 3])), ([3, 4, 5], Index([1, 2]))] + ) + def test_drop_by_numeric_label_errors_ignore(self, key, expected): + index = Index([1, 2, 3]) + dropped = index.drop(key, errors="ignore") + + tm.assert_index_equal(dropped, expected) + + @pytest.mark.parametrize( + "values", + [["a", "b", ("c", "d")], ["a", ("c", "d"), "b"], [("c", "d"), "a", "b"]], + ) + @pytest.mark.parametrize("to_drop", [[("c", "d"), "a"], ["a", ("c", "d")]]) + def test_drop_tuple(self, values, to_drop): + # GH 18304 + index = Index(values) + expected = Index(["b"], dtype=object) + + result = index.drop(to_drop) + tm.assert_index_equal(result, expected) + + removed = index.drop(to_drop[0]) + for drop_me in to_drop[1], [to_drop[1]]: + result = removed.drop(drop_me) + tm.assert_index_equal(result, expected) + + removed = index.drop(to_drop[1]) + msg = rf"\"\[{re.escape(to_drop[1].__repr__())}\] not found in axis\"" + for drop_me in to_drop[1], [to_drop[1]]: + with pytest.raises(KeyError, match=msg): + removed.drop(drop_me) + + @pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") + def test_drop_with_duplicates_in_index(self, index): + # GH38051 + if len(index) == 0 or isinstance(index, MultiIndex): + pytest.skip("Test doesn't make sense for empty MultiIndex") + if isinstance(index, IntervalIndex) and not IS64: + pytest.skip("Cannot test IntervalIndex with int64 dtype on 32 bit platform") + index = index.unique().repeat(2) + expected = index[2:] + result = index.drop(index[0]) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize( + "attr", + [ + "is_monotonic_increasing", + "is_monotonic_decreasing", + "_is_strictly_monotonic_increasing", + "_is_strictly_monotonic_decreasing", + ], + ) + def test_is_monotonic_incomparable(self, attr): + index = Index([5, datetime.now(), 7]) + assert not getattr(index, attr) + + @pytest.mark.parametrize("values", [["foo", "bar", "quux"], {"foo", "bar", "quux"}]) + @pytest.mark.parametrize( + "index,expected", + [ + (Index(["qux", "baz", "foo", "bar"]), np.array([False, False, True, True])), + (Index([]), np.array([], dtype=bool)), # empty + ], + ) + def test_isin(self, values, index, expected): + result = index.isin(values) + tm.assert_numpy_array_equal(result, expected) + + def test_isin_nan_common_object( + self, nulls_fixture, nulls_fixture2, using_infer_string + ): + # Test cartesian product of null fixtures and ensure that we don't + # mangle the various types (save a corner case with PyPy) + idx = Index(["a", nulls_fixture]) + + # all nans are the same + if ( + isinstance(nulls_fixture, float) + and isinstance(nulls_fixture2, float) + and math.isnan(nulls_fixture) + and math.isnan(nulls_fixture2) + ): + tm.assert_numpy_array_equal( + idx.isin([nulls_fixture2]), + np.array([False, True]), + ) + + elif nulls_fixture is nulls_fixture2: # should preserve NA type + tm.assert_numpy_array_equal( + idx.isin([nulls_fixture2]), + np.array([False, True]), + ) + + elif using_infer_string and idx.dtype == "string": + tm.assert_numpy_array_equal( + idx.isin([nulls_fixture2]), + np.array([False, True]), + ) + + else: + tm.assert_numpy_array_equal( + idx.isin([nulls_fixture2]), + np.array([False, False]), + ) + + def test_isin_nan_common_float64(self, nulls_fixture, float_numpy_dtype): + dtype = float_numpy_dtype + + if nulls_fixture is pd.NaT or nulls_fixture is pd.NA: + # Check 1) that we cannot construct a float64 Index with this value + # and 2) that with an NaN we do not have .isin(nulls_fixture) + msg = ( + r"float\(\) argument must be a string or a (real )?number, " + f"not {repr(type(nulls_fixture).__name__)}" + ) + with pytest.raises(TypeError, match=msg): + Index([1.0, nulls_fixture], dtype=dtype) + + idx = Index([1.0, np.nan], dtype=dtype) + assert not idx.isin([nulls_fixture]).any() + return + + idx = Index([1.0, nulls_fixture], dtype=dtype) + res = idx.isin([np.nan]) + tm.assert_numpy_array_equal(res, np.array([False, True])) + + # we cannot compare NaT with NaN + res = idx.isin([pd.NaT]) + tm.assert_numpy_array_equal(res, np.array([False, False])) + + @pytest.mark.parametrize("level", [0, -1]) + @pytest.mark.parametrize( + "index", + [ + Index(["qux", "baz", "foo", "bar"]), + Index([1.0, 2.0, 3.0, 4.0], dtype=np.float64), + ], + ) + def test_isin_level_kwarg(self, level, index): + values = index.tolist()[-2:] + ["nonexisting"] + + expected = np.array([False, False, True, True]) + tm.assert_numpy_array_equal(expected, index.isin(values, level=level)) + + index.name = "foobar" + tm.assert_numpy_array_equal(expected, index.isin(values, level="foobar")) + + def test_isin_level_kwarg_bad_level_raises(self, index): + for level in [10, index.nlevels, -(index.nlevels + 1)]: + with pytest.raises(IndexError, match="Too many levels"): + index.isin([], level=level) + + @pytest.mark.parametrize("label", [1.0, "foobar", "xyzzy", np.nan]) + def test_isin_level_kwarg_bad_label_raises(self, label, index): + if isinstance(index, MultiIndex): + index = index.rename(["foo", "bar"] + index.names[2:]) + msg = f"'Level {label} not found'" + else: + index = index.rename("foo") + msg = rf"Requested level \({label}\) does not match index name \(foo\)" + with pytest.raises(KeyError, match=msg): + index.isin([], level=label) + + @pytest.mark.parametrize("empty", [[], Series(dtype=object), np.array([])]) + def test_isin_empty(self, empty): + # see gh-16991 + index = Index(["a", "b"]) + expected = np.array([False, False]) + + result = index.isin(empty) + tm.assert_numpy_array_equal(expected, result) + + @td.skip_if_no("pyarrow") + def test_isin_arrow_string_null(self): + # GH#55821 + index = Index(["a", "b"], dtype="string[pyarrow_numpy]") + result = index.isin([None]) + expected = np.array([False, False]) + tm.assert_numpy_array_equal(result, expected) + + @pytest.mark.parametrize( + "values", + [ + [1, 2, 3, 4], + [1.0, 2.0, 3.0, 4.0], + [True, True, True, True], + ["foo", "bar", "baz", "qux"], + date_range("2018-01-01", freq="D", periods=4), + ], + ) + def test_boolean_cmp(self, values): + index = Index(values) + result = index == values + expected = np.array([True, True, True, True], dtype=bool) + + tm.assert_numpy_array_equal(result, expected) + + @pytest.mark.parametrize("index", ["string"], indirect=True) + @pytest.mark.parametrize("name,level", [(None, 0), ("a", "a")]) + def test_get_level_values(self, index, name, level): + expected = index.copy() + if name: + expected.name = name + + result = expected.get_level_values(level) + tm.assert_index_equal(result, expected) + + def test_slice_keep_name(self): + index = Index(["a", "b"], name="asdf") + assert index.name == index[1:].name + + @pytest.mark.parametrize( + "index", + [ + "string", + "datetime", + "int64", + "int32", + "uint64", + "uint32", + "float64", + "float32", + ], + indirect=True, + ) + def test_join_self(self, index, join_type): + result = index.join(index, how=join_type) + expected = index + if join_type == "outer": + expected = expected.sort_values() + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize("method", ["strip", "rstrip", "lstrip"]) + def test_str_attribute(self, method): + # GH9068 + index = Index([" jack", "jill ", " jesse ", "frank"]) + expected = Index([getattr(str, method)(x) for x in index.values]) + + result = getattr(index.str, method)() + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize( + "index", + [ + Index(range(5)), + date_range("2020-01-01", periods=10), + MultiIndex.from_tuples([("foo", "1"), ("bar", "3")]), + period_range(start="2000", end="2010", freq="Y"), + ], + ) + def test_str_attribute_raises(self, index): + with pytest.raises(AttributeError, match="only use .str accessor"): + index.str.repeat(2) + + @pytest.mark.parametrize( + "expand,expected", + [ + (None, Index([["a", "b", "c"], ["d", "e"], ["f"]])), + (False, Index([["a", "b", "c"], ["d", "e"], ["f"]])), + ( + True, + MultiIndex.from_tuples( + [("a", "b", "c"), ("d", "e", np.nan), ("f", np.nan, np.nan)] + ), + ), + ], + ) + def test_str_split(self, expand, expected): + index = Index(["a b c", "d e", "f"]) + if expand is not None: + result = index.str.split(expand=expand) + else: + result = index.str.split() + + tm.assert_index_equal(result, expected) + + def test_str_bool_return(self): + # test boolean case, should return np.array instead of boolean Index + index = Index(["a1", "a2", "b1", "b2"]) + result = index.str.startswith("a") + expected = np.array([True, True, False, False]) + + tm.assert_numpy_array_equal(result, expected) + assert isinstance(result, np.ndarray) + + def test_str_bool_series_indexing(self): + index = Index(["a1", "a2", "b1", "b2"]) + s = Series(range(4), index=index) + + result = s[s.index.str.startswith("a")] + expected = Series(range(2), index=["a1", "a2"]) + tm.assert_series_equal(result, expected) + + @pytest.mark.parametrize( + "index,expected", [(Index(list("abcd")), True), (Index(range(4)), False)] + ) + def test_tab_completion(self, index, expected): + # GH 9910 + result = "str" in dir(index) + assert result == expected + + def test_indexing_doesnt_change_class(self): + index = Index([1, 2, 3, "a", "b", "c"]) + + assert index[1:3].identical(Index([2, 3], dtype=np.object_)) + assert index[[0, 1]].identical(Index([1, 2], dtype=np.object_)) + + def test_outer_join_sort(self): + left_index = Index(np.random.default_rng(2).permutation(15)) + right_index = date_range("2020-01-01", periods=10) + + with tm.assert_produces_warning(RuntimeWarning): + result = left_index.join(right_index, how="outer") + + with tm.assert_produces_warning(RuntimeWarning): + expected = left_index.astype(object).union(right_index.astype(object)) + + tm.assert_index_equal(result, expected) + + def test_take_fill_value(self): + # GH 12631 + index = Index(list("ABC"), name="xxx") + result = index.take(np.array([1, 0, -1])) + expected = Index(list("BAC"), name="xxx") + tm.assert_index_equal(result, expected) + + # fill_value + result = index.take(np.array([1, 0, -1]), fill_value=True) + expected = Index(["B", "A", np.nan], name="xxx") + tm.assert_index_equal(result, expected) + + # allow_fill=False + result = index.take(np.array([1, 0, -1]), allow_fill=False, fill_value=True) + expected = Index(["B", "A", "C"], name="xxx") + tm.assert_index_equal(result, expected) + + def test_take_fill_value_none_raises(self): + index = Index(list("ABC"), name="xxx") + msg = ( + "When allow_fill=True and fill_value is not None, " + "all indices must be >= -1" + ) + + with pytest.raises(ValueError, match=msg): + index.take(np.array([1, 0, -2]), fill_value=True) + with pytest.raises(ValueError, match=msg): + index.take(np.array([1, 0, -5]), fill_value=True) + + def test_take_bad_bounds_raises(self): + index = Index(list("ABC"), name="xxx") + with pytest.raises(IndexError, match="out of bounds"): + index.take(np.array([1, -5])) + + @pytest.mark.parametrize("name", [None, "foobar"]) + @pytest.mark.parametrize( + "labels", + [ + [], + np.array([]), + ["A", "B", "C"], + ["C", "B", "A"], + np.array(["A", "B", "C"]), + np.array(["C", "B", "A"]), + # Must preserve name even if dtype changes + date_range("20130101", periods=3).values, + date_range("20130101", periods=3).tolist(), + ], + ) + def test_reindex_preserves_name_if_target_is_list_or_ndarray(self, name, labels): + # GH6552 + index = Index([0, 1, 2]) + index.name = name + assert index.reindex(labels)[0].name == name + + @pytest.mark.parametrize("labels", [[], np.array([]), np.array([], dtype=np.int64)]) + def test_reindex_preserves_type_if_target_is_empty_list_or_array(self, labels): + # GH7774 + index = Index(list("abc")) + assert index.reindex(labels)[0].dtype.type == index.dtype.type + + @pytest.mark.parametrize( + "labels,dtype", + [ + (DatetimeIndex([]), np.datetime64), + ], + ) + def test_reindex_doesnt_preserve_type_if_target_is_empty_index(self, labels, dtype): + # GH7774 + index = Index(list("abc")) + assert index.reindex(labels)[0].dtype.type == dtype + + def test_reindex_doesnt_preserve_type_if_target_is_empty_index_numeric( + self, any_real_numpy_dtype + ): + # GH7774 + dtype = any_real_numpy_dtype + index = Index(list("abc")) + labels = Index([], dtype=dtype) + assert index.reindex(labels)[0].dtype == dtype + + def test_reindex_no_type_preserve_target_empty_mi(self): + index = Index(list("abc")) + result = index.reindex( + MultiIndex([Index([], np.int64), Index([], np.float64)], [[], []]) + )[0] + assert result.levels[0].dtype.type == np.int64 + assert result.levels[1].dtype.type == np.float64 + + def test_reindex_ignoring_level(self): + # GH#35132 + idx = Index([1, 2, 3], name="x") + idx2 = Index([1, 2, 3, 4], name="x") + expected = Index([1, 2, 3, 4], name="x") + result, _ = idx.reindex(idx2, level="x") + tm.assert_index_equal(result, expected) + + def test_groupby(self): + index = Index(range(5)) + result = index.groupby(np.array([1, 1, 2, 2, 2])) + expected = {1: Index([0, 1]), 2: Index([2, 3, 4])} + + tm.assert_dict_equal(result, expected) + + @pytest.mark.parametrize( + "mi,expected", + [ + (MultiIndex.from_tuples([(1, 2), (4, 5)]), np.array([True, True])), + (MultiIndex.from_tuples([(1, 2), (4, 6)]), np.array([True, False])), + ], + ) + def test_equals_op_multiindex(self, mi, expected): + # GH9785 + # test comparisons of multiindex + df = DataFrame( + [3, 6], + columns=["c"], + index=MultiIndex.from_arrays([[1, 4], [2, 5]], names=["a", "b"]), + ) + + result = df.index == mi + tm.assert_numpy_array_equal(result, expected) + + def test_equals_op_multiindex_identify(self): + df = DataFrame( + [3, 6], + columns=["c"], + index=MultiIndex.from_arrays([[1, 4], [2, 5]], names=["a", "b"]), + ) + + result = df.index == df.index + expected = np.array([True, True]) + tm.assert_numpy_array_equal(result, expected) + + @pytest.mark.parametrize( + "index", + [ + MultiIndex.from_tuples([(1, 2), (4, 5), (8, 9)]), + Index(["foo", "bar", "baz"]), + ], + ) + def test_equals_op_mismatched_multiindex_raises(self, index): + df = DataFrame( + [3, 6], + columns=["c"], + index=MultiIndex.from_arrays([[1, 4], [2, 5]], names=["a", "b"]), + ) + + with pytest.raises(ValueError, match="Lengths must match"): + df.index == index + + def test_equals_op_index_vs_mi_same_length(self, using_infer_string): + mi = MultiIndex.from_tuples([(1, 2), (4, 5), (8, 9)]) + index = Index(["foo", "bar", "baz"]) + + result = mi == index + expected = np.array([False, False, False]) + tm.assert_numpy_array_equal(result, expected) + + @pytest.mark.parametrize( + "dt_conv, arg", + [ + (pd.to_datetime, ["2000-01-01", "2000-01-02"]), + (pd.to_timedelta, ["01:02:03", "01:02:04"]), + ], + ) + def test_dt_conversion_preserves_name(self, dt_conv, arg): + # GH 10875 + index = Index(arg, name="label") + assert index.name == dt_conv(index).name + + def test_cached_properties_not_settable(self): + index = Index([1, 2, 3]) + with pytest.raises(AttributeError, match="Can't set attribute"): + index.is_unique = False + + def test_tab_complete_warning(self, ip): + # https://github.com/pandas-dev/pandas/issues/16409 + pytest.importorskip("IPython", minversion="6.0.0") + from IPython.core.completer import provisionalcompleter + + code = "import pandas as pd; idx = pd.Index([1, 2])" + ip.run_cell(code) + + # GH 31324 newer jedi version raises Deprecation warning; + # appears resolved 2021-02-02 + with tm.assert_produces_warning(None, raise_on_extra_warnings=False): + with provisionalcompleter("ignore"): + list(ip.Completer.completions("idx.", 4)) + + def test_contains_method_removed(self, index): + # GH#30103 method removed for all types except IntervalIndex + if isinstance(index, IntervalIndex): + index.contains(1) + else: + msg = f"'{type(index).__name__}' object has no attribute 'contains'" + with pytest.raises(AttributeError, match=msg): + index.contains(1) + + def test_sortlevel(self): + index = Index([5, 4, 3, 2, 1]) + with pytest.raises(Exception, match="ascending must be a single bool value or"): + index.sortlevel(ascending="True") + + with pytest.raises( + Exception, match="ascending must be a list of bool values of length 1" + ): + index.sortlevel(ascending=[True, True]) + + with pytest.raises(Exception, match="ascending must be a bool value"): + index.sortlevel(ascending=["True"]) + + expected = Index([1, 2, 3, 4, 5]) + result = index.sortlevel(ascending=[True]) + tm.assert_index_equal(result[0], expected) + + expected = Index([1, 2, 3, 4, 5]) + result = index.sortlevel(ascending=True) + tm.assert_index_equal(result[0], expected) + + expected = Index([5, 4, 3, 2, 1]) + result = index.sortlevel(ascending=False) + tm.assert_index_equal(result[0], expected) + + def test_sortlevel_na_position(self): + # GH#51612 + idx = Index([1, np.nan]) + result = idx.sortlevel(na_position="first")[0] + expected = Index([np.nan, 1]) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize( + "periods, expected_results", + [ + (1, [np.nan, 10, 10, 10, 10]), + (2, [np.nan, np.nan, 20, 20, 20]), + (3, [np.nan, np.nan, np.nan, 30, 30]), + ], + ) + def test_index_diff(self, periods, expected_results): + # GH#19708 + idx = Index([10, 20, 30, 40, 50]) + result = idx.diff(periods) + expected = Index(expected_results) + + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize( + "decimals, expected_results", + [ + (0, [1.0, 2.0, 3.0]), + (1, [1.2, 2.3, 3.5]), + (2, [1.23, 2.35, 3.46]), + ], + ) + def test_index_round(self, decimals, expected_results): + # GH#19708 + idx = Index([1.234, 2.345, 3.456]) + result = idx.round(decimals) + expected = Index(expected_results) + + tm.assert_index_equal(result, expected) + + +class TestMixedIntIndex: + # Mostly the tests from common.py for which the results differ + # in py2 and py3 because ints and strings are uncomparable in py3 + # (GH 13514) + @pytest.fixture + def simple_index(self) -> Index: + return Index([0, "a", 1, "b", 2, "c"]) + + def test_argsort(self, simple_index): + index = simple_index + with pytest.raises(TypeError, match="'>|<' not supported"): + index.argsort() + + def test_numpy_argsort(self, simple_index): + index = simple_index + with pytest.raises(TypeError, match="'>|<' not supported"): + np.argsort(index) + + def test_copy_name(self, simple_index): + # Check that "name" argument passed at initialization is honoured + # GH12309 + index = simple_index + + first = type(index)(index, copy=True, name="mario") + second = type(first)(first, copy=False) + + # Even though "copy=False", we want a new object. + assert first is not second + tm.assert_index_equal(first, second) + + assert first.name == "mario" + assert second.name == "mario" + + s1 = Series(2, index=first) + s2 = Series(3, index=second[:-1]) + + s3 = s1 * s2 + + assert s3.index.name == "mario" + + def test_copy_name2(self): + # Check that adding a "name" parameter to the copy is honored + # GH14302 + index = Index([1, 2], name="MyName") + index1 = index.copy() + + tm.assert_index_equal(index, index1) + + index2 = index.copy(name="NewName") + tm.assert_index_equal(index, index2, check_names=False) + assert index.name == "MyName" + assert index2.name == "NewName" + + def test_unique_na(self): + idx = Index([2, np.nan, 2, 1], name="my_index") + expected = Index([2, np.nan, 1], name="my_index") + result = idx.unique() + tm.assert_index_equal(result, expected) + + def test_logical_compat(self, simple_index): + index = simple_index + assert index.all() == index.values.all() + assert index.any() == index.values.any() + + @pytest.mark.parametrize("how", ["any", "all"]) + @pytest.mark.parametrize("dtype", [None, object, "category"]) + @pytest.mark.parametrize( + "vals,expected", + [ + ([1, 2, 3], [1, 2, 3]), + ([1.0, 2.0, 3.0], [1.0, 2.0, 3.0]), + ([1.0, 2.0, np.nan, 3.0], [1.0, 2.0, 3.0]), + (["A", "B", "C"], ["A", "B", "C"]), + (["A", np.nan, "B", "C"], ["A", "B", "C"]), + ], + ) + def test_dropna(self, how, dtype, vals, expected): + # GH 6194 + index = Index(vals, dtype=dtype) + result = index.dropna(how=how) + expected = Index(expected, dtype=dtype) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize("how", ["any", "all"]) + @pytest.mark.parametrize( + "index,expected", + [ + ( + DatetimeIndex(["2011-01-01", "2011-01-02", "2011-01-03"]), + DatetimeIndex(["2011-01-01", "2011-01-02", "2011-01-03"]), + ), + ( + DatetimeIndex(["2011-01-01", "2011-01-02", "2011-01-03", pd.NaT]), + DatetimeIndex(["2011-01-01", "2011-01-02", "2011-01-03"]), + ), + ( + TimedeltaIndex(["1 days", "2 days", "3 days"]), + TimedeltaIndex(["1 days", "2 days", "3 days"]), + ), + ( + TimedeltaIndex([pd.NaT, "1 days", "2 days", "3 days", pd.NaT]), + TimedeltaIndex(["1 days", "2 days", "3 days"]), + ), + ( + PeriodIndex(["2012-02", "2012-04", "2012-05"], freq="M"), + PeriodIndex(["2012-02", "2012-04", "2012-05"], freq="M"), + ), + ( + PeriodIndex(["2012-02", "2012-04", "NaT", "2012-05"], freq="M"), + PeriodIndex(["2012-02", "2012-04", "2012-05"], freq="M"), + ), + ], + ) + def test_dropna_dt_like(self, how, index, expected): + result = index.dropna(how=how) + tm.assert_index_equal(result, expected) + + def test_dropna_invalid_how_raises(self): + msg = "invalid how option: xxx" + with pytest.raises(ValueError, match=msg): + Index([1, 2, 3]).dropna(how="xxx") + + @pytest.mark.parametrize( + "index", + [ + Index([np.nan]), + Index([np.nan, 1]), + Index([1, 2, np.nan]), + Index(["a", "b", np.nan]), + pd.to_datetime(["NaT"]), + pd.to_datetime(["NaT", "2000-01-01"]), + pd.to_datetime(["2000-01-01", "NaT", "2000-01-02"]), + pd.to_timedelta(["1 day", "NaT"]), + ], + ) + def test_is_monotonic_na(self, index): + assert index.is_monotonic_increasing is False + assert index.is_monotonic_decreasing is False + assert index._is_strictly_monotonic_increasing is False + assert index._is_strictly_monotonic_decreasing is False + + @pytest.mark.parametrize("dtype", ["f8", "m8[ns]", "M8[us]"]) + @pytest.mark.parametrize("unique_first", [True, False]) + def test_is_monotonic_unique_na(self, dtype, unique_first): + # GH 55755 + index = Index([None, 1, 1], dtype=dtype) + if unique_first: + assert index.is_unique is False + assert index.is_monotonic_increasing is False + assert index.is_monotonic_decreasing is False + else: + assert index.is_monotonic_increasing is False + assert index.is_monotonic_decreasing is False + assert index.is_unique is False + + def test_int_name_format(self, frame_or_series): + index = Index(["a", "b", "c"], name=0) + result = frame_or_series(list(range(3)), index=index) + assert "0" in repr(result) + + def test_str_to_bytes_raises(self): + # GH 26447 + index = Index([str(x) for x in range(10)]) + msg = "^'str' object cannot be interpreted as an integer$" + with pytest.raises(TypeError, match=msg): + bytes(index) + + @pytest.mark.filterwarnings("ignore:elementwise comparison failed:FutureWarning") + def test_index_with_tuple_bool(self): + # GH34123 + # TODO: also this op right now produces FutureWarning from numpy + # https://github.com/numpy/numpy/issues/11521 + idx = Index([("a", "b"), ("b", "c"), ("c", "a")]) + result = idx == ("c", "a") + expected = np.array([False, False, True]) + tm.assert_numpy_array_equal(result, expected) + + +class TestIndexUtils: + @pytest.mark.parametrize( + "data, names, expected", + [ + ([[1, 2, 3]], None, Index([1, 2, 3])), + ([[1, 2, 3]], ["name"], Index([1, 2, 3], name="name")), + ( + [["a", "a"], ["c", "d"]], + None, + MultiIndex([["a"], ["c", "d"]], [[0, 0], [0, 1]]), + ), + ( + [["a", "a"], ["c", "d"]], + ["L1", "L2"], + MultiIndex([["a"], ["c", "d"]], [[0, 0], [0, 1]], names=["L1", "L2"]), + ), + ], + ) + def test_ensure_index_from_sequences(self, data, names, expected): + result = ensure_index_from_sequences(data, names) + tm.assert_index_equal(result, expected) + + def test_ensure_index_mixed_closed_intervals(self): + # GH27172 + intervals = [ + pd.Interval(0, 1, closed="left"), + pd.Interval(1, 2, closed="right"), + pd.Interval(2, 3, closed="neither"), + pd.Interval(3, 4, closed="both"), + ] + result = ensure_index(intervals) + expected = Index(intervals, dtype=object) + tm.assert_index_equal(result, expected) + + def test_ensure_index_uint64(self): + # with both 0 and a large-uint64, np.array will infer to float64 + # https://github.com/numpy/numpy/issues/19146 + # but a more accurate choice would be uint64 + values = [0, np.iinfo(np.uint64).max] + + result = ensure_index(values) + assert list(result) == values + + expected = Index(values, dtype="uint64") + tm.assert_index_equal(result, expected) + + def test_get_combined_index(self): + result = _get_combined_index([]) + expected = Index([]) + tm.assert_index_equal(result, expected) + + +@pytest.mark.parametrize( + "opname", + [ + "eq", + "ne", + "le", + "lt", + "ge", + "gt", + "add", + "radd", + "sub", + "rsub", + "mul", + "rmul", + "truediv", + "rtruediv", + "floordiv", + "rfloordiv", + "pow", + "rpow", + "mod", + "divmod", + ], +) +def test_generated_op_names(opname, index): + opname = f"__{opname}__" + method = getattr(index, opname) + assert method.__name__ == opname + + +@pytest.mark.parametrize( + "klass", + [ + partial(CategoricalIndex, data=[1]), + partial(DatetimeIndex, data=["2020-01-01"]), + partial(PeriodIndex, data=["2020-01-01"]), + partial(TimedeltaIndex, data=["1 day"]), + partial(RangeIndex, data=range(1)), + partial(IntervalIndex, data=[pd.Interval(0, 1)]), + partial(Index, data=["a"], dtype=object), + partial(MultiIndex, levels=[1], codes=[0]), + ], +) +def test_index_subclass_constructor_wrong_kwargs(klass): + # GH #19348 + with pytest.raises(TypeError, match="unexpected keyword argument"): + klass(foo="bar") + + +def test_deprecated_fastpath(): + msg = "[Uu]nexpected keyword argument" + with pytest.raises(TypeError, match=msg): + Index(np.array(["a", "b"], dtype=object), name="test", fastpath=True) + + with pytest.raises(TypeError, match=msg): + Index(np.array([1, 2, 3], dtype="int64"), name="test", fastpath=True) + + with pytest.raises(TypeError, match=msg): + RangeIndex(0, 5, 2, name="test", fastpath=True) + + with pytest.raises(TypeError, match=msg): + CategoricalIndex(["a", "b", "c"], name="test", fastpath=True) + + +def test_shape_of_invalid_index(): + # Pre-2.0, it was possible to create "invalid" index objects backed by + # a multi-dimensional array (see https://github.com/pandas-dev/pandas/issues/27125 + # about this). However, as long as this is not solved in general,this test ensures + # that the returned shape is consistent with this underlying array for + # compat with matplotlib (see https://github.com/pandas-dev/pandas/issues/27775) + idx = Index([0, 1, 2, 3]) + with pytest.raises(ValueError, match="Multi-dimensional indexing"): + # GH#30588 multi-dimensional indexing deprecated + idx[:, None] + + +@pytest.mark.parametrize("dtype", [None, np.int64, np.uint64, np.float64]) +def test_validate_1d_input(dtype): + # GH#27125 check that we do not have >1-dimensional input + msg = "Index data must be 1-dimensional" + + arr = np.arange(8).reshape(2, 2, 2) + with pytest.raises(ValueError, match=msg): + Index(arr, dtype=dtype) + + df = DataFrame(arr.reshape(4, 2)) + with pytest.raises(ValueError, match=msg): + Index(df, dtype=dtype) + + # GH#13601 trying to assign a multi-dimensional array to an index is not allowed + ser = Series(0, range(4)) + with pytest.raises(ValueError, match=msg): + ser.index = np.array([[2, 3]] * 4, dtype=dtype) + + +@pytest.mark.parametrize( + "klass, extra_kwargs", + [ + [Index, {}], + *[[lambda x: Index(x, dtype=dtyp), {}] for dtyp in tm.ALL_REAL_NUMPY_DTYPES], + [DatetimeIndex, {}], + [TimedeltaIndex, {}], + [PeriodIndex, {"freq": "Y"}], + ], +) +def test_construct_from_memoryview(klass, extra_kwargs): + # GH 13120 + result = klass(memoryview(np.arange(2000, 2005)), **extra_kwargs) + expected = klass(list(range(2000, 2005)), **extra_kwargs) + tm.assert_index_equal(result, expected, exact=True) + + +@pytest.mark.parametrize("op", [operator.lt, operator.gt]) +def test_nan_comparison_same_object(op): + # GH#47105 + idx = Index([np.nan]) + expected = np.array([False]) + + result = op(idx, idx) + tm.assert_numpy_array_equal(result, expected) + + result = op(idx, idx.copy()) + tm.assert_numpy_array_equal(result, expected) + + +@td.skip_if_no("pyarrow") +def test_is_monotonic_pyarrow_list_type(): + # GH 57333 + import pyarrow as pa + + idx = Index([[1], [2, 3]], dtype=pd.ArrowDtype(pa.list_(pa.int64()))) + assert not idx.is_monotonic_increasing + assert not idx.is_monotonic_decreasing diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_common.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_common.py new file mode 100644 index 0000000000000000000000000000000000000000..05b2aa584674c58e38c649deb8e821ce2630672b --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_common.py @@ -0,0 +1,512 @@ +""" +Collection of tests asserting things that should be true for +any index subclass except for MultiIndex. Makes use of the `index_flat` +fixture defined in pandas/conftest.py. +""" +from copy import ( + copy, + deepcopy, +) +import re + +import numpy as np +import pytest + +from pandas.compat import IS64 +from pandas.compat.numpy import np_version_gte1p25 + +from pandas.core.dtypes.common import ( + is_integer_dtype, + is_numeric_dtype, +) + +import pandas as pd +from pandas import ( + CategoricalIndex, + MultiIndex, + PeriodIndex, + RangeIndex, +) +import pandas._testing as tm + + +class TestCommon: + @pytest.mark.parametrize("name", [None, "new_name"]) + def test_to_frame(self, name, index_flat, using_copy_on_write): + # see GH#15230, GH#22580 + idx = index_flat + + if name: + idx_name = name + else: + idx_name = idx.name or 0 + + df = idx.to_frame(name=idx_name) + + assert df.index is idx + assert len(df.columns) == 1 + assert df.columns[0] == idx_name + if not using_copy_on_write: + assert df[idx_name].values is not idx.values + + df = idx.to_frame(index=False, name=idx_name) + assert df.index is not idx + + def test_droplevel(self, index_flat): + # GH 21115 + # MultiIndex is tested separately in test_multi.py + index = index_flat + + assert index.droplevel([]).equals(index) + + for level in [index.name, [index.name]]: + if isinstance(index.name, tuple) and level is index.name: + # GH 21121 : droplevel with tuple name + continue + msg = ( + "Cannot remove 1 levels from an index with 1 levels: at least one " + "level must be left." + ) + with pytest.raises(ValueError, match=msg): + index.droplevel(level) + + for level in "wrong", ["wrong"]: + with pytest.raises( + KeyError, + match=r"'Requested level \(wrong\) does not match index name \(None\)'", + ): + index.droplevel(level) + + def test_constructor_non_hashable_name(self, index_flat): + # GH 20527 + index = index_flat + + message = "Index.name must be a hashable type" + renamed = [["1"]] + + # With .rename() + with pytest.raises(TypeError, match=message): + index.rename(name=renamed) + + # With .set_names() + with pytest.raises(TypeError, match=message): + index.set_names(names=renamed) + + def test_constructor_unwraps_index(self, index_flat): + a = index_flat + # Passing dtype is necessary for Index([True, False], dtype=object) + # case. + b = type(a)(a, dtype=a.dtype) + tm.assert_equal(a._data, b._data) + + def test_to_flat_index(self, index_flat): + # 22866 + index = index_flat + + result = index.to_flat_index() + tm.assert_index_equal(result, index) + + def test_set_name_methods(self, index_flat): + # MultiIndex tested separately + index = index_flat + new_name = "This is the new name for this index" + + original_name = index.name + new_ind = index.set_names([new_name]) + assert new_ind.name == new_name + assert index.name == original_name + res = index.rename(new_name, inplace=True) + + # should return None + assert res is None + assert index.name == new_name + assert index.names == [new_name] + with pytest.raises(ValueError, match="Level must be None"): + index.set_names("a", level=0) + + # rename in place just leaves tuples and other containers alone + name = ("A", "B") + index.rename(name, inplace=True) + assert index.name == name + assert index.names == [name] + + @pytest.mark.xfail + def test_set_names_single_label_no_level(self, index_flat): + with pytest.raises(TypeError, match="list-like"): + # should still fail even if it would be the right length + index_flat.set_names("a") + + def test_copy_and_deepcopy(self, index_flat): + index = index_flat + + for func in (copy, deepcopy): + idx_copy = func(index) + assert idx_copy is not index + assert idx_copy.equals(index) + + new_copy = index.copy(deep=True, name="banana") + assert new_copy.name == "banana" + + def test_copy_name(self, index_flat): + # GH#12309: Check that the "name" argument + # passed at initialization is honored. + index = index_flat + + first = type(index)(index, copy=True, name="mario") + second = type(first)(first, copy=False) + + # Even though "copy=False", we want a new object. + assert first is not second + tm.assert_index_equal(first, second) + + # Not using tm.assert_index_equal() since names differ. + assert index.equals(first) + + assert first.name == "mario" + assert second.name == "mario" + + # TODO: belongs in series arithmetic tests? + s1 = pd.Series(2, index=first) + s2 = pd.Series(3, index=second[:-1]) + # See GH#13365 + s3 = s1 * s2 + assert s3.index.name == "mario" + + def test_copy_name2(self, index_flat): + # GH#35592 + index = index_flat + + assert index.copy(name="mario").name == "mario" + + with pytest.raises(ValueError, match="Length of new names must be 1, got 2"): + index.copy(name=["mario", "luigi"]) + + msg = f"{type(index).__name__}.name must be a hashable type" + with pytest.raises(TypeError, match=msg): + index.copy(name=[["mario"]]) + + def test_unique_level(self, index_flat): + # don't test a MultiIndex here (as its tested separated) + index = index_flat + + # GH 17896 + expected = index.drop_duplicates() + for level in [0, index.name, None]: + result = index.unique(level=level) + tm.assert_index_equal(result, expected) + + msg = "Too many levels: Index has only 1 level, not 4" + with pytest.raises(IndexError, match=msg): + index.unique(level=3) + + msg = ( + rf"Requested level \(wrong\) does not match index name " + rf"\({re.escape(index.name.__repr__())}\)" + ) + with pytest.raises(KeyError, match=msg): + index.unique(level="wrong") + + def test_unique(self, index_flat): + # MultiIndex tested separately + index = index_flat + if not len(index): + pytest.skip("Skip check for empty Index and MultiIndex") + + idx = index[[0] * 5] + idx_unique = index[[0]] + + # We test against `idx_unique`, so first we make sure it's unique + # and doesn't contain nans. + assert idx_unique.is_unique is True + try: + assert idx_unique.hasnans is False + except NotImplementedError: + pass + + result = idx.unique() + tm.assert_index_equal(result, idx_unique) + + # nans: + if not index._can_hold_na: + pytest.skip("Skip na-check if index cannot hold na") + + vals = index._values[[0] * 5] + vals[0] = np.nan + + vals_unique = vals[:2] + idx_nan = index._shallow_copy(vals) + idx_unique_nan = index._shallow_copy(vals_unique) + assert idx_unique_nan.is_unique is True + + assert idx_nan.dtype == index.dtype + assert idx_unique_nan.dtype == index.dtype + + expected = idx_unique_nan + for pos, i in enumerate([idx_nan, idx_unique_nan]): + result = i.unique() + tm.assert_index_equal(result, expected) + + @pytest.mark.filterwarnings("ignore:Period with BDay freq:FutureWarning") + @pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") + def test_searchsorted_monotonic(self, index_flat, request): + # GH17271 + index = index_flat + # not implemented for tuple searches in MultiIndex + # or Intervals searches in IntervalIndex + if isinstance(index, pd.IntervalIndex): + mark = pytest.mark.xfail( + reason="IntervalIndex.searchsorted does not support Interval arg", + raises=NotImplementedError, + ) + request.applymarker(mark) + + # nothing to test if the index is empty + if index.empty: + pytest.skip("Skip check for empty Index") + value = index[0] + + # determine the expected results (handle dupes for 'right') + expected_left, expected_right = 0, (index == value).argmin() + if expected_right == 0: + # all values are the same, expected_right should be length + expected_right = len(index) + + # test _searchsorted_monotonic in all cases + # test searchsorted only for increasing + if index.is_monotonic_increasing: + ssm_left = index._searchsorted_monotonic(value, side="left") + assert expected_left == ssm_left + + ssm_right = index._searchsorted_monotonic(value, side="right") + assert expected_right == ssm_right + + ss_left = index.searchsorted(value, side="left") + assert expected_left == ss_left + + ss_right = index.searchsorted(value, side="right") + assert expected_right == ss_right + + elif index.is_monotonic_decreasing: + ssm_left = index._searchsorted_monotonic(value, side="left") + assert expected_left == ssm_left + + ssm_right = index._searchsorted_monotonic(value, side="right") + assert expected_right == ssm_right + else: + # non-monotonic should raise. + msg = "index must be monotonic increasing or decreasing" + with pytest.raises(ValueError, match=msg): + index._searchsorted_monotonic(value, side="left") + + @pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") + def test_drop_duplicates(self, index_flat, keep): + # MultiIndex is tested separately + index = index_flat + if isinstance(index, RangeIndex): + pytest.skip( + "RangeIndex is tested in test_drop_duplicates_no_duplicates " + "as it cannot hold duplicates" + ) + if len(index) == 0: + pytest.skip( + "empty index is tested in test_drop_duplicates_no_duplicates " + "as it cannot hold duplicates" + ) + + # make unique index + holder = type(index) + unique_values = list(set(index)) + dtype = index.dtype if is_numeric_dtype(index) else None + unique_idx = holder(unique_values, dtype=dtype) + + # make duplicated index + n = len(unique_idx) + duplicated_selection = np.random.default_rng(2).choice(n, int(n * 1.5)) + idx = holder(unique_idx.values[duplicated_selection]) + + # Series.duplicated is tested separately + expected_duplicated = ( + pd.Series(duplicated_selection).duplicated(keep=keep).values + ) + tm.assert_numpy_array_equal(idx.duplicated(keep=keep), expected_duplicated) + + # Series.drop_duplicates is tested separately + expected_dropped = holder(pd.Series(idx).drop_duplicates(keep=keep)) + tm.assert_index_equal(idx.drop_duplicates(keep=keep), expected_dropped) + + @pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") + def test_drop_duplicates_no_duplicates(self, index_flat): + # MultiIndex is tested separately + index = index_flat + + # make unique index + if isinstance(index, RangeIndex): + # RangeIndex cannot have duplicates + unique_idx = index + else: + holder = type(index) + unique_values = list(set(index)) + dtype = index.dtype if is_numeric_dtype(index) else None + unique_idx = holder(unique_values, dtype=dtype) + + # check on unique index + expected_duplicated = np.array([False] * len(unique_idx), dtype="bool") + tm.assert_numpy_array_equal(unique_idx.duplicated(), expected_duplicated) + result_dropped = unique_idx.drop_duplicates() + tm.assert_index_equal(result_dropped, unique_idx) + # validate shallow copy + assert result_dropped is not unique_idx + + def test_drop_duplicates_inplace(self, index): + msg = r"drop_duplicates\(\) got an unexpected keyword argument" + with pytest.raises(TypeError, match=msg): + index.drop_duplicates(inplace=True) + + @pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") + def test_has_duplicates(self, index_flat): + # MultiIndex tested separately in: + # tests/indexes/multi/test_unique_and_duplicates. + index = index_flat + holder = type(index) + if not len(index) or isinstance(index, RangeIndex): + # MultiIndex tested separately in: + # tests/indexes/multi/test_unique_and_duplicates. + # RangeIndex is unique by definition. + pytest.skip("Skip check for empty Index, MultiIndex, and RangeIndex") + + idx = holder([index[0]] * 5) + assert idx.is_unique is False + assert idx.has_duplicates is True + + @pytest.mark.parametrize( + "dtype", + ["int64", "uint64", "float64", "category", "datetime64[ns]", "timedelta64[ns]"], + ) + def test_astype_preserves_name(self, index, dtype): + # https://github.com/pandas-dev/pandas/issues/32013 + if isinstance(index, MultiIndex): + index.names = ["idx" + str(i) for i in range(index.nlevels)] + else: + index.name = "idx" + + warn = None + if index.dtype.kind == "c" and dtype in ["float64", "int64", "uint64"]: + # imaginary components discarded + if np_version_gte1p25: + warn = np.exceptions.ComplexWarning + else: + warn = np.ComplexWarning + + is_pyarrow_str = str(index.dtype) == "string[pyarrow]" and dtype == "category" + try: + # Some of these conversions cannot succeed so we use a try / except + with tm.assert_produces_warning( + warn, + raise_on_extra_warnings=is_pyarrow_str, + check_stacklevel=False, + ): + result = index.astype(dtype) + except (ValueError, TypeError, NotImplementedError, SystemError): + return + + if isinstance(index, MultiIndex): + assert result.names == index.names + else: + assert result.name == index.name + + def test_hasnans_isnans(self, index_flat): + # GH#11343, added tests for hasnans / isnans + index = index_flat + + # cases in indices doesn't include NaN + idx = index.copy(deep=True) + expected = np.array([False] * len(idx), dtype=bool) + tm.assert_numpy_array_equal(idx._isnan, expected) + assert idx.hasnans is False + + idx = index.copy(deep=True) + values = idx._values + + if len(index) == 0: + return + elif is_integer_dtype(index.dtype): + return + elif index.dtype == bool: + # values[1] = np.nan below casts to True! + return + + values[1] = np.nan + + idx = type(index)(values) + + expected = np.array([False] * len(idx), dtype=bool) + expected[1] = True + tm.assert_numpy_array_equal(idx._isnan, expected) + assert idx.hasnans is True + + +@pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") +@pytest.mark.parametrize("na_position", [None, "middle"]) +def test_sort_values_invalid_na_position(index_with_missing, na_position): + with pytest.raises(ValueError, match=f"invalid na_position: {na_position}"): + index_with_missing.sort_values(na_position=na_position) + + +@pytest.mark.fails_arm_wheels +@pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") +@pytest.mark.parametrize("na_position", ["first", "last"]) +def test_sort_values_with_missing(index_with_missing, na_position, request): + # GH 35584. Test that sort_values works with missing values, + # sort non-missing and place missing according to na_position + + if isinstance(index_with_missing, CategoricalIndex): + request.applymarker( + pytest.mark.xfail( + reason="missing value sorting order not well-defined", strict=False + ) + ) + + missing_count = np.sum(index_with_missing.isna()) + not_na_vals = index_with_missing[index_with_missing.notna()].values + sorted_values = np.sort(not_na_vals) + if na_position == "first": + sorted_values = np.concatenate([[None] * missing_count, sorted_values]) + else: + sorted_values = np.concatenate([sorted_values, [None] * missing_count]) + + # Explicitly pass dtype needed for Index backed by EA e.g. IntegerArray + expected = type(index_with_missing)(sorted_values, dtype=index_with_missing.dtype) + + result = index_with_missing.sort_values(na_position=na_position) + tm.assert_index_equal(result, expected) + + +def test_ndarray_compat_properties(index): + if isinstance(index, PeriodIndex) and not IS64: + pytest.skip("Overflow") + idx = index + assert idx.T.equals(idx) + assert idx.transpose().equals(idx) + + values = idx.values + + assert idx.shape == values.shape + assert idx.ndim == values.ndim + assert idx.size == values.size + + if not isinstance(index, (RangeIndex, MultiIndex)): + # These two are not backed by an ndarray + assert idx.nbytes == values.nbytes + + # test for validity + idx.nbytes + idx.values.nbytes + + +def test_compare_read_only_array(): + # GH#57130 + arr = np.array([], dtype=object) + arr.flags.writeable = False + idx = pd.Index(arr) + result = idx > 69 + assert result.dtype == bool diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_datetimelike.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_datetimelike.py new file mode 100644 index 0000000000000000000000000000000000000000..21a686e8bc05b09729c6fe54e67c96405ee36bca --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_datetimelike.py @@ -0,0 +1,171 @@ +""" generic datetimelike tests """ + +import numpy as np +import pytest + +import pandas as pd +import pandas._testing as tm + + +class TestDatetimeLike: + @pytest.fixture( + params=[ + pd.period_range("20130101", periods=5, freq="D"), + pd.TimedeltaIndex( + [ + "0 days 01:00:00", + "1 days 01:00:00", + "2 days 01:00:00", + "3 days 01:00:00", + "4 days 01:00:00", + ], + dtype="timedelta64[ns]", + freq="D", + ), + pd.DatetimeIndex( + ["2013-01-01", "2013-01-02", "2013-01-03", "2013-01-04", "2013-01-05"], + dtype="datetime64[ns]", + freq="D", + ), + ] + ) + def simple_index(self, request): + return request.param + + def test_isin(self, simple_index): + index = simple_index[:4] + result = index.isin(index) + assert result.all() + + result = index.isin(list(index)) + assert result.all() + + result = index.isin([index[2], 5]) + expected = np.array([False, False, True, False]) + tm.assert_numpy_array_equal(result, expected) + + def test_argsort_matches_array(self, simple_index): + idx = simple_index + idx = idx.insert(1, pd.NaT) + + result = idx.argsort() + expected = idx._data.argsort() + tm.assert_numpy_array_equal(result, expected) + + def test_can_hold_identifiers(self, simple_index): + idx = simple_index + key = idx[0] + assert idx._can_hold_identifiers_and_holds_name(key) is False + + def test_shift_identity(self, simple_index): + idx = simple_index + tm.assert_index_equal(idx, idx.shift(0)) + + def test_shift_empty(self, simple_index): + # GH#14811 + idx = simple_index[:0] + tm.assert_index_equal(idx, idx.shift(1)) + + def test_str(self, simple_index): + # test the string repr + idx = simple_index.copy() + idx.name = "foo" + assert f"length={len(idx)}" not in str(idx) + assert "'foo'" in str(idx) + assert type(idx).__name__ in str(idx) + + if hasattr(idx, "tz"): + if idx.tz is not None: + assert idx.tz in str(idx) + if isinstance(idx, pd.PeriodIndex): + assert f"dtype='period[{idx.freqstr}]'" in str(idx) + else: + assert f"freq='{idx.freqstr}'" in str(idx) + + def test_view(self, simple_index): + idx = simple_index + + idx_view = idx.view("i8") + result = type(simple_index)(idx) + tm.assert_index_equal(result, idx) + + msg = "Passing a type in .*Index.view is deprecated" + with tm.assert_produces_warning(FutureWarning, match=msg): + idx_view = idx.view(type(simple_index)) + result = type(simple_index)(idx) + tm.assert_index_equal(result, idx_view) + + def test_map_callable(self, simple_index): + index = simple_index + expected = index + index.freq + result = index.map(lambda x: x + index.freq) + tm.assert_index_equal(result, expected) + + # map to NaT + result = index.map(lambda x: pd.NaT if x == index[0] else x) + expected = pd.Index([pd.NaT] + index[1:].tolist()) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize( + "mapper", + [ + lambda values, index: {i: e for e, i in zip(values, index)}, + lambda values, index: pd.Series(values, index, dtype=object), + ], + ) + @pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") + def test_map_dictlike(self, mapper, simple_index): + index = simple_index + expected = index + index.freq + + # don't compare the freqs + if isinstance(expected, (pd.DatetimeIndex, pd.TimedeltaIndex)): + expected = expected._with_freq(None) + + result = index.map(mapper(expected, index)) + tm.assert_index_equal(result, expected) + + expected = pd.Index([pd.NaT] + index[1:].tolist()) + result = index.map(mapper(expected, index)) + tm.assert_index_equal(result, expected) + + # empty map; these map to np.nan because we cannot know + # to re-infer things + expected = pd.Index([np.nan] * len(index)) + result = index.map(mapper([], [])) + tm.assert_index_equal(result, expected) + + def test_getitem_preserves_freq(self, simple_index): + index = simple_index + assert index.freq is not None + + result = index[:] + assert result.freq == index.freq + + def test_where_cast_str(self, simple_index): + index = simple_index + + mask = np.ones(len(index), dtype=bool) + mask[-1] = False + + result = index.where(mask, str(index[0])) + expected = index.where(mask, index[0]) + tm.assert_index_equal(result, expected) + + result = index.where(mask, [str(index[0])]) + tm.assert_index_equal(result, expected) + + expected = index.astype(object).where(mask, "foo") + result = index.where(mask, "foo") + tm.assert_index_equal(result, expected) + + result = index.where(mask, ["foo"]) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize("unit", ["ns", "us", "ms", "s"]) + def test_diff(self, unit): + # GH 55080 + dti = pd.to_datetime([10, 20, 30], unit=unit).as_unit(unit) + result = dti.diff(1) + expected = pd.to_timedelta([pd.NaT, 10, 10], unit=unit).as_unit(unit) + tm.assert_index_equal(result, expected) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_engines.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_engines.py new file mode 100644 index 0000000000000000000000000000000000000000..468c2240c8192098a6ff75a5a2d0210c8108a176 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_engines.py @@ -0,0 +1,192 @@ +import re + +import numpy as np +import pytest + +from pandas._libs import index as libindex + +import pandas as pd + + +@pytest.fixture( + params=[ + (libindex.Int64Engine, np.int64), + (libindex.Int32Engine, np.int32), + (libindex.Int16Engine, np.int16), + (libindex.Int8Engine, np.int8), + (libindex.UInt64Engine, np.uint64), + (libindex.UInt32Engine, np.uint32), + (libindex.UInt16Engine, np.uint16), + (libindex.UInt8Engine, np.uint8), + (libindex.Float64Engine, np.float64), + (libindex.Float32Engine, np.float32), + ], + ids=lambda x: x[0].__name__, +) +def numeric_indexing_engine_type_and_dtype(request): + return request.param + + +class TestDatetimeEngine: + @pytest.mark.parametrize( + "scalar", + [ + pd.Timedelta(pd.Timestamp("2016-01-01").asm8.view("m8[ns]")), + pd.Timestamp("2016-01-01")._value, + pd.Timestamp("2016-01-01").to_pydatetime(), + pd.Timestamp("2016-01-01").to_datetime64(), + ], + ) + def test_not_contains_requires_timestamp(self, scalar): + dti1 = pd.date_range("2016-01-01", periods=3) + dti2 = dti1.insert(1, pd.NaT) # non-monotonic + dti3 = dti1.insert(3, dti1[0]) # non-unique + dti4 = pd.date_range("2016-01-01", freq="ns", periods=2_000_000) + dti5 = dti4.insert(0, dti4[0]) # over size threshold, not unique + + msg = "|".join([re.escape(str(scalar)), re.escape(repr(scalar))]) + for dti in [dti1, dti2, dti3, dti4, dti5]: + with pytest.raises(TypeError, match=msg): + scalar in dti._engine + + with pytest.raises(KeyError, match=msg): + dti._engine.get_loc(scalar) + + +class TestTimedeltaEngine: + @pytest.mark.parametrize( + "scalar", + [ + pd.Timestamp(pd.Timedelta(days=42).asm8.view("datetime64[ns]")), + pd.Timedelta(days=42)._value, + pd.Timedelta(days=42).to_pytimedelta(), + pd.Timedelta(days=42).to_timedelta64(), + ], + ) + def test_not_contains_requires_timedelta(self, scalar): + tdi1 = pd.timedelta_range("42 days", freq="9h", periods=1234) + tdi2 = tdi1.insert(1, pd.NaT) # non-monotonic + tdi3 = tdi1.insert(3, tdi1[0]) # non-unique + tdi4 = pd.timedelta_range("42 days", freq="ns", periods=2_000_000) + tdi5 = tdi4.insert(0, tdi4[0]) # over size threshold, not unique + + msg = "|".join([re.escape(str(scalar)), re.escape(repr(scalar))]) + for tdi in [tdi1, tdi2, tdi3, tdi4, tdi5]: + with pytest.raises(TypeError, match=msg): + scalar in tdi._engine + + with pytest.raises(KeyError, match=msg): + tdi._engine.get_loc(scalar) + + +class TestNumericEngine: + def test_is_monotonic(self, numeric_indexing_engine_type_and_dtype): + engine_type, dtype = numeric_indexing_engine_type_and_dtype + num = 1000 + arr = np.array([1] * num + [2] * num + [3] * num, dtype=dtype) + + # monotonic increasing + engine = engine_type(arr) + assert engine.is_monotonic_increasing is True + assert engine.is_monotonic_decreasing is False + + # monotonic decreasing + engine = engine_type(arr[::-1]) + assert engine.is_monotonic_increasing is False + assert engine.is_monotonic_decreasing is True + + # neither monotonic increasing or decreasing + arr = np.array([1] * num + [2] * num + [1] * num, dtype=dtype) + engine = engine_type(arr[::-1]) + assert engine.is_monotonic_increasing is False + assert engine.is_monotonic_decreasing is False + + def test_is_unique(self, numeric_indexing_engine_type_and_dtype): + engine_type, dtype = numeric_indexing_engine_type_and_dtype + + # unique + arr = np.array([1, 3, 2], dtype=dtype) + engine = engine_type(arr) + assert engine.is_unique is True + + # not unique + arr = np.array([1, 2, 1], dtype=dtype) + engine = engine_type(arr) + assert engine.is_unique is False + + def test_get_loc(self, numeric_indexing_engine_type_and_dtype): + engine_type, dtype = numeric_indexing_engine_type_and_dtype + + # unique + arr = np.array([1, 2, 3], dtype=dtype) + engine = engine_type(arr) + assert engine.get_loc(2) == 1 + + # monotonic + num = 1000 + arr = np.array([1] * num + [2] * num + [3] * num, dtype=dtype) + engine = engine_type(arr) + assert engine.get_loc(2) == slice(1000, 2000) + + # not monotonic + arr = np.array([1, 2, 3] * num, dtype=dtype) + engine = engine_type(arr) + expected = np.array([False, True, False] * num, dtype=bool) + result = engine.get_loc(2) + assert (result == expected).all() + + +class TestObjectEngine: + engine_type = libindex.ObjectEngine + dtype = np.object_ + values = list("abc") + + def test_is_monotonic(self): + num = 1000 + arr = np.array(["a"] * num + ["a"] * num + ["c"] * num, dtype=self.dtype) + + # monotonic increasing + engine = self.engine_type(arr) + assert engine.is_monotonic_increasing is True + assert engine.is_monotonic_decreasing is False + + # monotonic decreasing + engine = self.engine_type(arr[::-1]) + assert engine.is_monotonic_increasing is False + assert engine.is_monotonic_decreasing is True + + # neither monotonic increasing or decreasing + arr = np.array(["a"] * num + ["b"] * num + ["a"] * num, dtype=self.dtype) + engine = self.engine_type(arr[::-1]) + assert engine.is_monotonic_increasing is False + assert engine.is_monotonic_decreasing is False + + def test_is_unique(self): + # unique + arr = np.array(self.values, dtype=self.dtype) + engine = self.engine_type(arr) + assert engine.is_unique is True + + # not unique + arr = np.array(["a", "b", "a"], dtype=self.dtype) + engine = self.engine_type(arr) + assert engine.is_unique is False + + def test_get_loc(self): + # unique + arr = np.array(self.values, dtype=self.dtype) + engine = self.engine_type(arr) + assert engine.get_loc("b") == 1 + + # monotonic + num = 1000 + arr = np.array(["a"] * num + ["b"] * num + ["c"] * num, dtype=self.dtype) + engine = self.engine_type(arr) + assert engine.get_loc("b") == slice(1000, 2000) + + # not monotonic + arr = np.array(self.values * num, dtype=self.dtype) + engine = self.engine_type(arr) + expected = np.array([False, True, False] * num, dtype=bool) + result = engine.get_loc("b") + assert (result == expected).all() diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_frozen.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_frozen.py new file mode 100644 index 0000000000000000000000000000000000000000..ace66b5b06a51291d2cf229fdc446d070054836a --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_frozen.py @@ -0,0 +1,113 @@ +import re + +import pytest + +from pandas.core.indexes.frozen import FrozenList + + +@pytest.fixture +def lst(): + return [1, 2, 3, 4, 5] + + +@pytest.fixture +def container(lst): + return FrozenList(lst) + + +@pytest.fixture +def unicode_container(): + return FrozenList(["\u05d0", "\u05d1", "c"]) + + +class TestFrozenList: + def check_mutable_error(self, *args, **kwargs): + # Pass whatever function you normally would to pytest.raises + # (after the Exception kind). + mutable_regex = re.compile("does not support mutable operations") + msg = "'(_s)?re.(SRE_)?Pattern' object is not callable" + with pytest.raises(TypeError, match=msg): + mutable_regex(*args, **kwargs) + + def test_no_mutable_funcs(self, container): + def setitem(): + container[0] = 5 + + self.check_mutable_error(setitem) + + def setslice(): + container[1:2] = 3 + + self.check_mutable_error(setslice) + + def delitem(): + del container[0] + + self.check_mutable_error(delitem) + + def delslice(): + del container[0:3] + + self.check_mutable_error(delslice) + + mutable_methods = ("extend", "pop", "remove", "insert") + + for meth in mutable_methods: + self.check_mutable_error(getattr(container, meth)) + + def test_slicing_maintains_type(self, container, lst): + result = container[1:2] + expected = lst[1:2] + self.check_result(result, expected) + + def check_result(self, result, expected): + assert isinstance(result, FrozenList) + assert result == expected + + def test_string_methods_dont_fail(self, container): + repr(container) + str(container) + bytes(container) + + def test_tricky_container(self, unicode_container): + repr(unicode_container) + str(unicode_container) + + def test_add(self, container, lst): + result = container + (1, 2, 3) + expected = FrozenList(lst + [1, 2, 3]) + self.check_result(result, expected) + + result = (1, 2, 3) + container + expected = FrozenList([1, 2, 3] + lst) + self.check_result(result, expected) + + def test_iadd(self, container, lst): + q = r = container + + q += [5] + self.check_result(q, lst + [5]) + + # Other shouldn't be mutated. + self.check_result(r, lst) + + def test_union(self, container, lst): + result = container.union((1, 2, 3)) + expected = FrozenList(lst + [1, 2, 3]) + self.check_result(result, expected) + + def test_difference(self, container): + result = container.difference([2]) + expected = FrozenList([1, 3, 4, 5]) + self.check_result(result, expected) + + def test_difference_dupe(self): + result = FrozenList([1, 2, 3, 2]).difference([2]) + expected = FrozenList([1, 3]) + self.check_result(result, expected) + + def test_tricky_container_to_bytes_raises(self, unicode_container): + # GH 26447 + msg = "^'str' object cannot be interpreted as an integer$" + with pytest.raises(TypeError, match=msg): + bytes(unicode_container) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_index_new.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_index_new.py new file mode 100644 index 0000000000000000000000000000000000000000..6042e5b9cc6793018ccf26f37aec236dfa353393 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_index_new.py @@ -0,0 +1,432 @@ +""" +Tests for the Index constructor conducting inference. +""" +from datetime import ( + datetime, + timedelta, + timezone, +) +from decimal import Decimal + +import numpy as np +import pytest + +from pandas._libs.tslibs.timezones import maybe_get_tz + +from pandas import ( + NA, + Categorical, + CategoricalIndex, + DatetimeIndex, + Index, + IntervalIndex, + MultiIndex, + NaT, + PeriodIndex, + Series, + TimedeltaIndex, + Timestamp, + array, + date_range, + period_range, + timedelta_range, +) +import pandas._testing as tm + + +class TestIndexConstructorInference: + def test_object_all_bools(self): + # GH#49594 match Series behavior on ndarray[object] of all bools + arr = np.array([True, False], dtype=object) + res = Index(arr) + assert res.dtype == object + + # since the point is matching Series behavior, let's double check + assert Series(arr).dtype == object + + def test_object_all_complex(self): + # GH#49594 match Series behavior on ndarray[object] of all complex + arr = np.array([complex(1), complex(2)], dtype=object) + res = Index(arr) + assert res.dtype == object + + # since the point is matching Series behavior, let's double check + assert Series(arr).dtype == object + + @pytest.mark.parametrize("val", [NaT, None, np.nan, float("nan")]) + def test_infer_nat(self, val): + # GH#49340 all NaT/None/nan and at least 1 NaT -> datetime64[ns], + # matching Series behavior + values = [NaT, val] + + idx = Index(values) + assert idx.dtype == "datetime64[ns]" and idx.isna().all() + + idx = Index(values[::-1]) + assert idx.dtype == "datetime64[ns]" and idx.isna().all() + + idx = Index(np.array(values, dtype=object)) + assert idx.dtype == "datetime64[ns]" and idx.isna().all() + + idx = Index(np.array(values, dtype=object)[::-1]) + assert idx.dtype == "datetime64[ns]" and idx.isna().all() + + @pytest.mark.parametrize("na_value", [None, np.nan]) + @pytest.mark.parametrize("vtype", [list, tuple, iter]) + def test_construction_list_tuples_nan(self, na_value, vtype): + # GH#18505 : valid tuples containing NaN + values = [(1, "two"), (3.0, na_value)] + result = Index(vtype(values)) + expected = MultiIndex.from_tuples(values) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize( + "dtype", + [int, "int64", "int32", "int16", "int8", "uint64", "uint32", "uint16", "uint8"], + ) + def test_constructor_int_dtype_float(self, dtype): + # GH#18400 + expected = Index([0, 1, 2, 3], dtype=dtype) + result = Index([0.0, 1.0, 2.0, 3.0], dtype=dtype) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize("cast_index", [True, False]) + @pytest.mark.parametrize( + "vals", [[True, False, True], np.array([True, False, True], dtype=bool)] + ) + def test_constructor_dtypes_to_object(self, cast_index, vals): + if cast_index: + index = Index(vals, dtype=bool) + else: + index = Index(vals) + + assert type(index) is Index + assert index.dtype == bool + + def test_constructor_categorical_to_object(self): + # GH#32167 Categorical data and dtype=object should return object-dtype + ci = CategoricalIndex(range(5)) + result = Index(ci, dtype=object) + assert not isinstance(result, CategoricalIndex) + + def test_constructor_infer_periodindex(self): + xp = period_range("2012-1-1", freq="M", periods=3) + rs = Index(xp) + tm.assert_index_equal(rs, xp) + assert isinstance(rs, PeriodIndex) + + def test_from_list_of_periods(self): + rng = period_range("1/1/2000", periods=20, freq="D") + periods = list(rng) + + result = Index(periods) + assert isinstance(result, PeriodIndex) + + @pytest.mark.parametrize("pos", [0, 1]) + @pytest.mark.parametrize( + "klass,dtype,ctor", + [ + (DatetimeIndex, "datetime64[ns]", np.datetime64("nat")), + (TimedeltaIndex, "timedelta64[ns]", np.timedelta64("nat")), + ], + ) + def test_constructor_infer_nat_dt_like( + self, pos, klass, dtype, ctor, nulls_fixture, request + ): + if isinstance(nulls_fixture, Decimal): + # We dont cast these to datetime64/timedelta64 + pytest.skip( + f"We don't cast {type(nulls_fixture).__name__} to " + "datetime64/timedelta64" + ) + + expected = klass([NaT, NaT]) + assert expected.dtype == dtype + data = [ctor] + data.insert(pos, nulls_fixture) + + warn = None + if nulls_fixture is NA: + expected = Index([NA, NaT]) + mark = pytest.mark.xfail(reason="Broken with np.NaT ctor; see GH 31884") + request.applymarker(mark) + # GH#35942 numpy will emit a DeprecationWarning within the + # assert_index_equal calls. Since we can't do anything + # about it until GH#31884 is fixed, we suppress that warning. + warn = DeprecationWarning + + result = Index(data) + + with tm.assert_produces_warning(warn): + tm.assert_index_equal(result, expected) + + result = Index(np.array(data, dtype=object)) + + with tm.assert_produces_warning(warn): + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize("swap_objs", [True, False]) + def test_constructor_mixed_nat_objs_infers_object(self, swap_objs): + # mixed np.datetime64/timedelta64 nat results in object + data = [np.datetime64("nat"), np.timedelta64("nat")] + if swap_objs: + data = data[::-1] + + expected = Index(data, dtype=object) + tm.assert_index_equal(Index(data), expected) + tm.assert_index_equal(Index(np.array(data, dtype=object)), expected) + + @pytest.mark.parametrize("swap_objs", [True, False]) + def test_constructor_datetime_and_datetime64(self, swap_objs): + data = [Timestamp(2021, 6, 8, 9, 42), np.datetime64("now")] + if swap_objs: + data = data[::-1] + expected = DatetimeIndex(data) + + tm.assert_index_equal(Index(data), expected) + tm.assert_index_equal(Index(np.array(data, dtype=object)), expected) + + def test_constructor_datetimes_mixed_tzs(self): + # https://github.com/pandas-dev/pandas/pull/55793/files#r1383719998 + tz = maybe_get_tz("US/Central") + dt1 = datetime(2020, 1, 1, tzinfo=tz) + dt2 = datetime(2020, 1, 1, tzinfo=timezone.utc) + result = Index([dt1, dt2]) + expected = Index([dt1, dt2], dtype=object) + tm.assert_index_equal(result, expected) + + +class TestDtypeEnforced: + # check we don't silently ignore the dtype keyword + + def test_constructor_object_dtype_with_ea_data(self, any_numeric_ea_dtype): + # GH#45206 + arr = array([0], dtype=any_numeric_ea_dtype) + + idx = Index(arr, dtype=object) + assert idx.dtype == object + + @pytest.mark.parametrize("dtype", [object, "float64", "uint64", "category"]) + def test_constructor_range_values_mismatched_dtype(self, dtype): + rng = Index(range(5)) + + result = Index(rng, dtype=dtype) + assert result.dtype == dtype + + result = Index(range(5), dtype=dtype) + assert result.dtype == dtype + + @pytest.mark.parametrize("dtype", [object, "float64", "uint64", "category"]) + def test_constructor_categorical_values_mismatched_non_ea_dtype(self, dtype): + cat = Categorical([1, 2, 3]) + + result = Index(cat, dtype=dtype) + assert result.dtype == dtype + + def test_constructor_categorical_values_mismatched_dtype(self): + dti = date_range("2016-01-01", periods=3) + cat = Categorical(dti) + result = Index(cat, dti.dtype) + tm.assert_index_equal(result, dti) + + dti2 = dti.tz_localize("Asia/Tokyo") + cat2 = Categorical(dti2) + result = Index(cat2, dti2.dtype) + tm.assert_index_equal(result, dti2) + + ii = IntervalIndex.from_breaks(range(5)) + cat3 = Categorical(ii) + result = Index(cat3, dtype=ii.dtype) + tm.assert_index_equal(result, ii) + + def test_constructor_ea_values_mismatched_categorical_dtype(self): + dti = date_range("2016-01-01", periods=3) + result = Index(dti, dtype="category") + expected = CategoricalIndex(dti) + tm.assert_index_equal(result, expected) + + dti2 = date_range("2016-01-01", periods=3, tz="US/Pacific") + result = Index(dti2, dtype="category") + expected = CategoricalIndex(dti2) + tm.assert_index_equal(result, expected) + + def test_constructor_period_values_mismatched_dtype(self): + pi = period_range("2016-01-01", periods=3, freq="D") + result = Index(pi, dtype="category") + expected = CategoricalIndex(pi) + tm.assert_index_equal(result, expected) + + def test_constructor_timedelta64_values_mismatched_dtype(self): + # check we don't silently ignore the dtype keyword + tdi = timedelta_range("4 Days", periods=5) + result = Index(tdi, dtype="category") + expected = CategoricalIndex(tdi) + tm.assert_index_equal(result, expected) + + def test_constructor_interval_values_mismatched_dtype(self): + dti = date_range("2016-01-01", periods=3) + ii = IntervalIndex.from_breaks(dti) + result = Index(ii, dtype="category") + expected = CategoricalIndex(ii) + tm.assert_index_equal(result, expected) + + def test_constructor_datetime64_values_mismatched_period_dtype(self): + dti = date_range("2016-01-01", periods=3) + result = Index(dti, dtype="Period[D]") + expected = dti.to_period("D") + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize("dtype", ["int64", "uint64"]) + def test_constructor_int_dtype_nan_raises(self, dtype): + # see GH#15187 + data = [np.nan] + msg = "cannot convert" + with pytest.raises(ValueError, match=msg): + Index(data, dtype=dtype) + + @pytest.mark.parametrize( + "vals", + [ + [1, 2, 3], + np.array([1, 2, 3]), + np.array([1, 2, 3], dtype=int), + # below should coerce + [1.0, 2.0, 3.0], + np.array([1.0, 2.0, 3.0], dtype=float), + ], + ) + def test_constructor_dtypes_to_int(self, vals, any_int_numpy_dtype): + dtype = any_int_numpy_dtype + index = Index(vals, dtype=dtype) + assert index.dtype == dtype + + @pytest.mark.parametrize( + "vals", + [ + [1, 2, 3], + [1.0, 2.0, 3.0], + np.array([1.0, 2.0, 3.0]), + np.array([1, 2, 3], dtype=int), + np.array([1.0, 2.0, 3.0], dtype=float), + ], + ) + def test_constructor_dtypes_to_float(self, vals, float_numpy_dtype): + dtype = float_numpy_dtype + index = Index(vals, dtype=dtype) + assert index.dtype == dtype + + @pytest.mark.parametrize( + "vals", + [ + [1, 2, 3], + np.array([1, 2, 3], dtype=int), + np.array(["2011-01-01", "2011-01-02"], dtype="datetime64[ns]"), + [datetime(2011, 1, 1), datetime(2011, 1, 2)], + ], + ) + def test_constructor_dtypes_to_categorical(self, vals): + index = Index(vals, dtype="category") + assert isinstance(index, CategoricalIndex) + + @pytest.mark.parametrize("cast_index", [True, False]) + @pytest.mark.parametrize( + "vals", + [ + Index(np.array([np.datetime64("2011-01-01"), np.datetime64("2011-01-02")])), + Index([datetime(2011, 1, 1), datetime(2011, 1, 2)]), + ], + ) + def test_constructor_dtypes_to_datetime(self, cast_index, vals): + if cast_index: + index = Index(vals, dtype=object) + assert isinstance(index, Index) + assert index.dtype == object + else: + index = Index(vals) + assert isinstance(index, DatetimeIndex) + + @pytest.mark.parametrize("cast_index", [True, False]) + @pytest.mark.parametrize( + "vals", + [ + np.array([np.timedelta64(1, "D"), np.timedelta64(1, "D")]), + [timedelta(1), timedelta(1)], + ], + ) + def test_constructor_dtypes_to_timedelta(self, cast_index, vals): + if cast_index: + index = Index(vals, dtype=object) + assert isinstance(index, Index) + assert index.dtype == object + else: + index = Index(vals) + assert isinstance(index, TimedeltaIndex) + + def test_pass_timedeltaindex_to_index(self): + rng = timedelta_range("1 days", "10 days") + idx = Index(rng, dtype=object) + + expected = Index(rng.to_pytimedelta(), dtype=object) + + tm.assert_numpy_array_equal(idx.values, expected.values) + + def test_pass_datetimeindex_to_index(self): + # GH#1396 + rng = date_range("1/1/2000", "3/1/2000") + idx = Index(rng, dtype=object) + + expected = Index(rng.to_pydatetime(), dtype=object) + + tm.assert_numpy_array_equal(idx.values, expected.values) + + +class TestIndexConstructorUnwrapping: + # Test passing different arraylike values to pd.Index + + @pytest.mark.parametrize("klass", [Index, DatetimeIndex]) + def test_constructor_from_series_dt64(self, klass): + stamps = [Timestamp("20110101"), Timestamp("20120101"), Timestamp("20130101")] + expected = DatetimeIndex(stamps) + ser = Series(stamps) + result = klass(ser) + tm.assert_index_equal(result, expected) + + def test_constructor_no_pandas_array(self): + ser = Series([1, 2, 3]) + result = Index(ser.array) + expected = Index([1, 2, 3]) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize( + "array", + [ + np.arange(5), + np.array(["a", "b", "c"]), + date_range("2000-01-01", periods=3).values, + ], + ) + def test_constructor_ndarray_like(self, array): + # GH#5460#issuecomment-44474502 + # it should be possible to convert any object that satisfies the numpy + # ndarray interface directly into an Index + class ArrayLike: + def __init__(self, array) -> None: + self.array = array + + def __array__(self, dtype=None, copy=None) -> np.ndarray: + return self.array + + expected = Index(array) + result = Index(ArrayLike(array)) + tm.assert_index_equal(result, expected) + + +class TestIndexConstructionErrors: + def test_constructor_overflow_int64(self): + # see GH#15832 + msg = ( + "The elements provided in the data cannot " + "all be casted to the dtype int64" + ) + with pytest.raises(OverflowError, match=msg): + Index([np.iinfo(np.uint64).max - 1], dtype="int64") diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_indexing.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_indexing.py new file mode 100644 index 0000000000000000000000000000000000000000..1ea47f636ac9b64346b21496fe25d4fe109cd711 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_indexing.py @@ -0,0 +1,357 @@ +""" +test_indexing tests the following Index methods: + __getitem__ + get_loc + get_value + __contains__ + take + where + get_indexer + get_indexer_for + slice_locs + asof_locs + +The corresponding tests.indexes.[index_type].test_indexing files +contain tests for the corresponding methods specific to those Index subclasses. +""" +import numpy as np +import pytest + +from pandas.errors import InvalidIndexError + +from pandas.core.dtypes.common import ( + is_float_dtype, + is_scalar, +) + +from pandas import ( + NA, + DatetimeIndex, + Index, + IntervalIndex, + MultiIndex, + NaT, + PeriodIndex, + TimedeltaIndex, +) +import pandas._testing as tm + + +class TestTake: + def test_take_invalid_kwargs(self, index): + indices = [1, 2] + + msg = r"take\(\) got an unexpected keyword argument 'foo'" + with pytest.raises(TypeError, match=msg): + index.take(indices, foo=2) + + msg = "the 'out' parameter is not supported" + with pytest.raises(ValueError, match=msg): + index.take(indices, out=indices) + + msg = "the 'mode' parameter is not supported" + with pytest.raises(ValueError, match=msg): + index.take(indices, mode="clip") + + def test_take(self, index): + indexer = [4, 3, 0, 2] + if len(index) < 5: + pytest.skip("Test doesn't make sense since not enough elements") + + result = index.take(indexer) + expected = index[indexer] + assert result.equals(expected) + + if not isinstance(index, (DatetimeIndex, PeriodIndex, TimedeltaIndex)): + # GH 10791 + msg = r"'(.*Index)' object has no attribute 'freq'" + with pytest.raises(AttributeError, match=msg): + index.freq + + def test_take_indexer_type(self): + # GH#42875 + integer_index = Index([0, 1, 2, 3]) + scalar_index = 1 + msg = "Expected indices to be array-like" + with pytest.raises(TypeError, match=msg): + integer_index.take(scalar_index) + + def test_take_minus1_without_fill(self, index): + # -1 does not get treated as NA unless allow_fill=True is passed + if len(index) == 0: + # Test is not applicable + pytest.skip("Test doesn't make sense for empty index") + + result = index.take([0, 0, -1]) + + expected = index.take([0, 0, len(index) - 1]) + tm.assert_index_equal(result, expected) + + +class TestContains: + @pytest.mark.parametrize( + "index,val", + [ + (Index([0, 1, 2]), 2), + (Index([0, 1, "2"]), "2"), + (Index([0, 1, 2, np.inf, 4]), 4), + (Index([0, 1, 2, np.nan, 4]), 4), + (Index([0, 1, 2, np.inf]), np.inf), + (Index([0, 1, 2, np.nan]), np.nan), + ], + ) + def test_index_contains(self, index, val): + assert val in index + + @pytest.mark.parametrize( + "index,val", + [ + (Index([0, 1, 2]), "2"), + (Index([0, 1, "2"]), 2), + (Index([0, 1, 2, np.inf]), 4), + (Index([0, 1, 2, np.nan]), 4), + (Index([0, 1, 2, np.inf]), np.nan), + (Index([0, 1, 2, np.nan]), np.inf), + # Checking if np.inf in int64 Index should not cause an OverflowError + # Related to GH 16957 + (Index([0, 1, 2], dtype=np.int64), np.inf), + (Index([0, 1, 2], dtype=np.int64), np.nan), + (Index([0, 1, 2], dtype=np.uint64), np.inf), + (Index([0, 1, 2], dtype=np.uint64), np.nan), + ], + ) + def test_index_not_contains(self, index, val): + assert val not in index + + @pytest.mark.parametrize( + "index,val", [(Index([0, 1, "2"]), 0), (Index([0, 1, "2"]), "2")] + ) + def test_mixed_index_contains(self, index, val): + # GH#19860 + assert val in index + + @pytest.mark.parametrize( + "index,val", [(Index([0, 1, "2"]), "1"), (Index([0, 1, "2"]), 2)] + ) + def test_mixed_index_not_contains(self, index, val): + # GH#19860 + assert val not in index + + def test_contains_with_float_index(self, any_real_numpy_dtype): + # GH#22085 + dtype = any_real_numpy_dtype + data = [0, 1, 2, 3] if not is_float_dtype(dtype) else [0.1, 1.1, 2.2, 3.3] + index = Index(data, dtype=dtype) + + if not is_float_dtype(index.dtype): + assert 1.1 not in index + assert 1.0 in index + assert 1 in index + else: + assert 1.1 in index + assert 1.0 not in index + assert 1 not in index + + def test_contains_requires_hashable_raises(self, index): + if isinstance(index, MultiIndex): + return # TODO: do we want this to raise? + + msg = "unhashable type: 'list'" + with pytest.raises(TypeError, match=msg): + [] in index + + msg = "|".join( + [ + r"unhashable type: 'dict'", + r"must be real number, not dict", + r"an integer is required", + r"\{\}", + r"pandas\._libs\.interval\.IntervalTree' is not iterable", + ] + ) + with pytest.raises(TypeError, match=msg): + {} in index._engine + + +class TestGetLoc: + def test_get_loc_non_hashable(self, index): + with pytest.raises(InvalidIndexError, match="[0, 1]"): + index.get_loc([0, 1]) + + def test_get_loc_non_scalar_hashable(self, index): + # GH52877 + from enum import Enum + + class E(Enum): + X1 = "x1" + + assert not is_scalar(E.X1) + + exc = KeyError + msg = "" + if isinstance( + index, + ( + DatetimeIndex, + TimedeltaIndex, + PeriodIndex, + IntervalIndex, + ), + ): + # TODO: make these more consistent? + exc = InvalidIndexError + msg = "E.X1" + with pytest.raises(exc, match=msg): + index.get_loc(E.X1) + + def test_get_loc_generator(self, index): + exc = KeyError + if isinstance( + index, + ( + DatetimeIndex, + TimedeltaIndex, + PeriodIndex, + IntervalIndex, + MultiIndex, + ), + ): + # TODO: make these more consistent? + exc = InvalidIndexError + with pytest.raises(exc, match="generator object"): + # MultiIndex specifically checks for generator; others for scalar + index.get_loc(x for x in range(5)) + + def test_get_loc_masked_duplicated_na(self): + # GH#48411 + idx = Index([1, 2, NA, NA], dtype="Int64") + result = idx.get_loc(NA) + expected = np.array([False, False, True, True]) + tm.assert_numpy_array_equal(result, expected) + + +class TestGetIndexer: + def test_get_indexer_base(self, index): + if index._index_as_unique: + expected = np.arange(index.size, dtype=np.intp) + actual = index.get_indexer(index) + tm.assert_numpy_array_equal(expected, actual) + else: + msg = "Reindexing only valid with uniquely valued Index objects" + with pytest.raises(InvalidIndexError, match=msg): + index.get_indexer(index) + + with pytest.raises(ValueError, match="Invalid fill method"): + index.get_indexer(index, method="invalid") + + def test_get_indexer_consistency(self, index): + # See GH#16819 + + if index._index_as_unique: + indexer = index.get_indexer(index[0:2]) + assert isinstance(indexer, np.ndarray) + assert indexer.dtype == np.intp + else: + msg = "Reindexing only valid with uniquely valued Index objects" + with pytest.raises(InvalidIndexError, match=msg): + index.get_indexer(index[0:2]) + + indexer, _ = index.get_indexer_non_unique(index[0:2]) + assert isinstance(indexer, np.ndarray) + assert indexer.dtype == np.intp + + def test_get_indexer_masked_duplicated_na(self): + # GH#48411 + idx = Index([1, 2, NA, NA], dtype="Int64") + result = idx.get_indexer_for(Index([1, NA], dtype="Int64")) + expected = np.array([0, 2, 3], dtype=result.dtype) + tm.assert_numpy_array_equal(result, expected) + + +class TestConvertSliceIndexer: + def test_convert_almost_null_slice(self, index): + # slice with None at both ends, but not step + + key = slice(None, None, "foo") + + if isinstance(index, IntervalIndex): + msg = "label-based slicing with step!=1 is not supported for IntervalIndex" + with pytest.raises(ValueError, match=msg): + index._convert_slice_indexer(key, "loc") + else: + msg = "'>=' not supported between instances of 'str' and 'int'" + with pytest.raises(TypeError, match=msg): + index._convert_slice_indexer(key, "loc") + + +class TestPutmask: + def test_putmask_with_wrong_mask(self, index): + # GH#18368 + if not len(index): + pytest.skip("Test doesn't make sense for empty index") + + fill = index[0] + + msg = "putmask: mask and data must be the same size" + with pytest.raises(ValueError, match=msg): + index.putmask(np.ones(len(index) + 1, np.bool_), fill) + + with pytest.raises(ValueError, match=msg): + index.putmask(np.ones(len(index) - 1, np.bool_), fill) + + with pytest.raises(ValueError, match=msg): + index.putmask("foo", fill) + + +@pytest.mark.parametrize( + "idx", [Index([1, 2, 3]), Index([0.1, 0.2, 0.3]), Index(["a", "b", "c"])] +) +def test_getitem_deprecated_float(idx): + # https://github.com/pandas-dev/pandas/issues/34191 + + msg = "Indexing with a float is no longer supported" + with pytest.raises(IndexError, match=msg): + idx[1.0] + + +@pytest.mark.parametrize( + "idx,target,expected", + [ + ([np.nan, "var1", np.nan], [np.nan], np.array([0, 2], dtype=np.intp)), + ( + [np.nan, "var1", np.nan], + [np.nan, "var1"], + np.array([0, 2, 1], dtype=np.intp), + ), + ( + np.array([np.nan, "var1", np.nan], dtype=object), + [np.nan], + np.array([0, 2], dtype=np.intp), + ), + ( + DatetimeIndex(["2020-08-05", NaT, NaT]), + [NaT], + np.array([1, 2], dtype=np.intp), + ), + (["a", "b", "a", np.nan], [np.nan], np.array([3], dtype=np.intp)), + ( + np.array(["b", np.nan, float("NaN"), "b"], dtype=object), + Index([np.nan], dtype=object), + np.array([1, 2], dtype=np.intp), + ), + ], +) +def test_get_indexer_non_unique_multiple_nans(idx, target, expected): + # GH 35392 + axis = Index(idx) + actual = axis.get_indexer_for(target) + tm.assert_numpy_array_equal(actual, expected) + + +def test_get_indexer_non_unique_nans_in_object_dtype_target(nulls_fixture): + idx = Index([1.0, 2.0]) + target = Index([1, nulls_fixture], dtype="object") + + result_idx, result_missing = idx.get_indexer_non_unique(target) + tm.assert_numpy_array_equal(result_idx, np.array([0, -1], dtype=np.intp)) + tm.assert_numpy_array_equal(result_missing, np.array([1], dtype=np.intp)) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_numpy_compat.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_numpy_compat.py new file mode 100644 index 0000000000000000000000000000000000000000..ace78d77350cbdc4ca3aa837720767a965443051 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_numpy_compat.py @@ -0,0 +1,189 @@ +import numpy as np +import pytest + +from pandas import ( + CategoricalIndex, + DatetimeIndex, + Index, + PeriodIndex, + TimedeltaIndex, + isna, +) +import pandas._testing as tm +from pandas.api.types import ( + is_complex_dtype, + is_numeric_dtype, +) +from pandas.core.arrays import BooleanArray +from pandas.core.indexes.datetimelike import DatetimeIndexOpsMixin + + +def test_numpy_ufuncs_out(index): + result = index == index + + out = np.empty(index.shape, dtype=bool) + np.equal(index, index, out=out) + tm.assert_numpy_array_equal(out, result) + + if not index._is_multi: + # same thing on the ExtensionArray + out = np.empty(index.shape, dtype=bool) + np.equal(index.array, index.array, out=out) + tm.assert_numpy_array_equal(out, result) + + +@pytest.mark.parametrize( + "func", + [ + np.exp, + np.exp2, + np.expm1, + np.log, + np.log2, + np.log10, + np.log1p, + np.sqrt, + np.sin, + np.cos, + np.tan, + np.arcsin, + np.arccos, + np.arctan, + np.sinh, + np.cosh, + np.tanh, + np.arcsinh, + np.arccosh, + np.arctanh, + np.deg2rad, + np.rad2deg, + ], + ids=lambda x: x.__name__, +) +def test_numpy_ufuncs_basic(index, func): + # test ufuncs of numpy, see: + # https://numpy.org/doc/stable/reference/ufuncs.html + + if isinstance(index, DatetimeIndexOpsMixin): + with tm.external_error_raised((TypeError, AttributeError)): + with np.errstate(all="ignore"): + func(index) + elif is_numeric_dtype(index) and not ( + is_complex_dtype(index) and func in [np.deg2rad, np.rad2deg] + ): + # coerces to float (e.g. np.sin) + with np.errstate(all="ignore"): + result = func(index) + arr_result = func(index.values) + if arr_result.dtype == np.float16: + arr_result = arr_result.astype(np.float32) + exp = Index(arr_result, name=index.name) + + tm.assert_index_equal(result, exp) + if isinstance(index.dtype, np.dtype) and is_numeric_dtype(index): + if is_complex_dtype(index): + assert result.dtype == index.dtype + elif index.dtype in ["bool", "int8", "uint8"]: + assert result.dtype in ["float16", "float32"] + elif index.dtype in ["int16", "uint16", "float32"]: + assert result.dtype == "float32" + else: + assert result.dtype == "float64" + else: + # e.g. np.exp with Int64 -> Float64 + assert type(result) is Index + # raise AttributeError or TypeError + elif len(index) == 0: + pass + else: + with tm.external_error_raised((TypeError, AttributeError)): + with np.errstate(all="ignore"): + func(index) + + +@pytest.mark.parametrize( + "func", [np.isfinite, np.isinf, np.isnan, np.signbit], ids=lambda x: x.__name__ +) +def test_numpy_ufuncs_other(index, func): + # test ufuncs of numpy, see: + # https://numpy.org/doc/stable/reference/ufuncs.html + if isinstance(index, (DatetimeIndex, TimedeltaIndex)): + if func in (np.isfinite, np.isinf, np.isnan): + # numpy 1.18 changed isinf and isnan to not raise on dt64/td64 + result = func(index) + assert isinstance(result, np.ndarray) + + out = np.empty(index.shape, dtype=bool) + func(index, out=out) + tm.assert_numpy_array_equal(out, result) + else: + with tm.external_error_raised(TypeError): + func(index) + + elif isinstance(index, PeriodIndex): + with tm.external_error_raised(TypeError): + func(index) + + elif is_numeric_dtype(index) and not ( + is_complex_dtype(index) and func is np.signbit + ): + # Results in bool array + result = func(index) + if not isinstance(index.dtype, np.dtype): + # e.g. Int64 we expect to get BooleanArray back + assert isinstance(result, BooleanArray) + else: + assert isinstance(result, np.ndarray) + + out = np.empty(index.shape, dtype=bool) + func(index, out=out) + + if not isinstance(index.dtype, np.dtype): + tm.assert_numpy_array_equal(out, result._data) + else: + tm.assert_numpy_array_equal(out, result) + + elif len(index) == 0: + pass + else: + with tm.external_error_raised(TypeError): + func(index) + + +@pytest.mark.parametrize("func", [np.maximum, np.minimum]) +def test_numpy_ufuncs_reductions(index, func, request): + # TODO: overlap with tests.series.test_ufunc.test_reductions + if len(index) == 0: + pytest.skip("Test doesn't make sense for empty index.") + + if isinstance(index, CategoricalIndex) and index.dtype.ordered is False: + with pytest.raises(TypeError, match="is not ordered for"): + func.reduce(index) + return + else: + result = func.reduce(index) + + if func is np.maximum: + expected = index.max(skipna=False) + else: + expected = index.min(skipna=False) + # TODO: do we have cases both with and without NAs? + + assert type(result) is type(expected) + if isna(result): + assert isna(expected) + else: + assert result == expected + + +@pytest.mark.parametrize("func", [np.bitwise_and, np.bitwise_or, np.bitwise_xor]) +def test_numpy_ufuncs_bitwise(func): + # https://github.com/pandas-dev/pandas/issues/46769 + idx1 = Index([1, 2, 3, 4], dtype="int64") + idx2 = Index([3, 4, 5, 6], dtype="int64") + + with tm.assert_produces_warning(None): + result = func(idx1, idx2) + + expected = Index(func(idx1.values, idx2.values)) + tm.assert_index_equal(result, expected) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_old_base.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_old_base.py new file mode 100644 index 0000000000000000000000000000000000000000..1787379b0faee68956932a451a1dfbbdc711204c --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_old_base.py @@ -0,0 +1,1061 @@ +from __future__ import annotations + +from datetime import datetime +import weakref + +import numpy as np +import pytest + +from pandas._config import using_pyarrow_string_dtype + +from pandas._libs.tslibs import Timestamp + +from pandas.core.dtypes.common import ( + is_integer_dtype, + is_numeric_dtype, +) +from pandas.core.dtypes.dtypes import CategoricalDtype + +import pandas as pd +from pandas import ( + CategoricalIndex, + DatetimeIndex, + DatetimeTZDtype, + Index, + IntervalIndex, + MultiIndex, + PeriodIndex, + RangeIndex, + Series, + TimedeltaIndex, + isna, + period_range, +) +import pandas._testing as tm +import pandas.core.algorithms as algos +from pandas.core.arrays import BaseMaskedArray + + +class TestBase: + @pytest.fixture( + params=[ + RangeIndex(start=0, stop=20, step=2), + Index(np.arange(5, dtype=np.float64)), + Index(np.arange(5, dtype=np.float32)), + Index(np.arange(5, dtype=np.uint64)), + Index(range(0, 20, 2), dtype=np.int64), + Index(range(0, 20, 2), dtype=np.int32), + Index(range(0, 20, 2), dtype=np.int16), + Index(range(0, 20, 2), dtype=np.int8), + Index(list("abcde")), + Index([0, "a", 1, "b", 2, "c"]), + period_range("20130101", periods=5, freq="D"), + TimedeltaIndex( + [ + "0 days 01:00:00", + "1 days 01:00:00", + "2 days 01:00:00", + "3 days 01:00:00", + "4 days 01:00:00", + ], + dtype="timedelta64[ns]", + freq="D", + ), + DatetimeIndex( + ["2013-01-01", "2013-01-02", "2013-01-03", "2013-01-04", "2013-01-05"], + dtype="datetime64[ns]", + freq="D", + ), + IntervalIndex.from_breaks(range(11), closed="right"), + ] + ) + def simple_index(self, request): + return request.param + + def test_pickle_compat_construction(self, simple_index): + # need an object to create with + if isinstance(simple_index, RangeIndex): + pytest.skip("RangeIndex() is a valid constructor") + msg = "|".join( + [ + r"Index\(\.\.\.\) must be called with a collection of some " + r"kind, None was passed", + r"DatetimeIndex\(\) must be called with a collection of some " + r"kind, None was passed", + r"TimedeltaIndex\(\) must be called with a collection of some " + r"kind, None was passed", + r"__new__\(\) missing 1 required positional argument: 'data'", + r"__new__\(\) takes at least 2 arguments \(1 given\)", + ] + ) + with pytest.raises(TypeError, match=msg): + type(simple_index)() + + def test_shift(self, simple_index): + # GH8083 test the base class for shift + if isinstance(simple_index, (DatetimeIndex, TimedeltaIndex, PeriodIndex)): + pytest.skip("Tested in test_ops/test_arithmetic") + idx = simple_index + msg = ( + f"This method is only implemented for DatetimeIndex, PeriodIndex and " + f"TimedeltaIndex; Got type {type(idx).__name__}" + ) + with pytest.raises(NotImplementedError, match=msg): + idx.shift(1) + with pytest.raises(NotImplementedError, match=msg): + idx.shift(1, 2) + + def test_constructor_name_unhashable(self, simple_index): + # GH#29069 check that name is hashable + # See also same-named test in tests.series.test_constructors + idx = simple_index + with pytest.raises(TypeError, match="Index.name must be a hashable type"): + type(idx)(idx, name=[]) + + def test_create_index_existing_name(self, simple_index): + # GH11193, when an existing index is passed, and a new name is not + # specified, the new index should inherit the previous object name + expected = simple_index.copy() + if not isinstance(expected, MultiIndex): + expected.name = "foo" + result = Index(expected) + tm.assert_index_equal(result, expected) + + result = Index(expected, name="bar") + expected.name = "bar" + tm.assert_index_equal(result, expected) + else: + expected.names = ["foo", "bar"] + result = Index(expected) + tm.assert_index_equal( + result, + Index( + Index( + [ + ("foo", "one"), + ("foo", "two"), + ("bar", "one"), + ("baz", "two"), + ("qux", "one"), + ("qux", "two"), + ], + dtype="object", + ), + names=["foo", "bar"], + ), + ) + + result = Index(expected, names=["A", "B"]) + tm.assert_index_equal( + result, + Index( + Index( + [ + ("foo", "one"), + ("foo", "two"), + ("bar", "one"), + ("baz", "two"), + ("qux", "one"), + ("qux", "two"), + ], + dtype="object", + ), + names=["A", "B"], + ), + ) + + def test_numeric_compat(self, simple_index): + idx = simple_index + # Check that this doesn't cover MultiIndex case, if/when it does, + # we can remove multi.test_compat.test_numeric_compat + assert not isinstance(idx, MultiIndex) + if type(idx) is Index: + pytest.skip("Not applicable for Index") + if is_numeric_dtype(simple_index.dtype) or isinstance( + simple_index, TimedeltaIndex + ): + pytest.skip("Tested elsewhere.") + + typ = type(idx._data).__name__ + cls = type(idx).__name__ + lmsg = "|".join( + [ + rf"unsupported operand type\(s\) for \*: '{typ}' and 'int'", + "cannot perform (__mul__|__truediv__|__floordiv__) with " + f"this index type: ({cls}|{typ})", + ] + ) + with pytest.raises(TypeError, match=lmsg): + idx * 1 + rmsg = "|".join( + [ + rf"unsupported operand type\(s\) for \*: 'int' and '{typ}'", + "cannot perform (__rmul__|__rtruediv__|__rfloordiv__) with " + f"this index type: ({cls}|{typ})", + ] + ) + with pytest.raises(TypeError, match=rmsg): + 1 * idx + + div_err = lmsg.replace("*", "/") + with pytest.raises(TypeError, match=div_err): + idx / 1 + div_err = rmsg.replace("*", "/") + with pytest.raises(TypeError, match=div_err): + 1 / idx + + floordiv_err = lmsg.replace("*", "//") + with pytest.raises(TypeError, match=floordiv_err): + idx // 1 + floordiv_err = rmsg.replace("*", "//") + with pytest.raises(TypeError, match=floordiv_err): + 1 // idx + + def test_logical_compat(self, simple_index): + if simple_index.dtype in (object, "string"): + pytest.skip("Tested elsewhere.") + idx = simple_index + if idx.dtype.kind in "iufcbm": + assert idx.all() == idx._values.all() + assert idx.all() == idx.to_series().all() + assert idx.any() == idx._values.any() + assert idx.any() == idx.to_series().any() + else: + msg = "cannot perform (any|all)" + if isinstance(idx, IntervalIndex): + msg = ( + r"'IntervalArray' with dtype interval\[.*\] does " + "not support reduction '(any|all)'" + ) + with pytest.raises(TypeError, match=msg): + idx.all() + with pytest.raises(TypeError, match=msg): + idx.any() + + def test_repr_roundtrip(self, simple_index): + if isinstance(simple_index, IntervalIndex): + pytest.skip(f"Not a valid repr for {type(simple_index).__name__}") + idx = simple_index + tm.assert_index_equal(eval(repr(idx)), idx) + + def test_repr_max_seq_item_setting(self, simple_index): + # GH10182 + if isinstance(simple_index, IntervalIndex): + pytest.skip(f"Not a valid repr for {type(simple_index).__name__}") + idx = simple_index + idx = idx.repeat(50) + with pd.option_context("display.max_seq_items", None): + repr(idx) + assert "..." not in str(idx) + + @pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") + def test_ensure_copied_data(self, index): + # Check the "copy" argument of each Index.__new__ is honoured + # GH12309 + init_kwargs = {} + if isinstance(index, PeriodIndex): + # Needs "freq" specification: + init_kwargs["freq"] = index.freq + elif isinstance(index, (RangeIndex, MultiIndex, CategoricalIndex)): + pytest.skip( + "RangeIndex cannot be initialized from data, " + "MultiIndex and CategoricalIndex are tested separately" + ) + elif index.dtype == object and index.inferred_type == "boolean": + init_kwargs["dtype"] = index.dtype + + index_type = type(index) + result = index_type(index.values, copy=True, **init_kwargs) + if isinstance(index.dtype, DatetimeTZDtype): + result = result.tz_localize("UTC").tz_convert(index.tz) + if isinstance(index, (DatetimeIndex, TimedeltaIndex)): + index = index._with_freq(None) + + tm.assert_index_equal(index, result) + + if isinstance(index, PeriodIndex): + # .values an object array of Period, thus copied + depr_msg = "The 'ordinal' keyword in PeriodIndex is deprecated" + with tm.assert_produces_warning(FutureWarning, match=depr_msg): + result = index_type(ordinal=index.asi8, copy=False, **init_kwargs) + tm.assert_numpy_array_equal(index.asi8, result.asi8, check_same="same") + elif isinstance(index, IntervalIndex): + # checked in test_interval.py + pass + elif type(index) is Index and not isinstance(index.dtype, np.dtype): + result = index_type(index.values, copy=False, **init_kwargs) + tm.assert_index_equal(result, index) + + if isinstance(index._values, BaseMaskedArray): + assert np.shares_memory(index._values._data, result._values._data) + tm.assert_numpy_array_equal( + index._values._data, result._values._data, check_same="same" + ) + assert np.shares_memory(index._values._mask, result._values._mask) + tm.assert_numpy_array_equal( + index._values._mask, result._values._mask, check_same="same" + ) + elif index.dtype == "string[python]": + assert np.shares_memory(index._values._ndarray, result._values._ndarray) + tm.assert_numpy_array_equal( + index._values._ndarray, result._values._ndarray, check_same="same" + ) + elif index.dtype in ("string[pyarrow]", "string[pyarrow_numpy]"): + assert tm.shares_memory(result._values, index._values) + else: + raise NotImplementedError(index.dtype) + else: + result = index_type(index.values, copy=False, **init_kwargs) + tm.assert_numpy_array_equal(index.values, result.values, check_same="same") + + def test_memory_usage(self, index): + index._engine.clear_mapping() + result = index.memory_usage() + if index.empty: + # we report 0 for no-length + assert result == 0 + return + + # non-zero length + index.get_loc(index[0]) + result2 = index.memory_usage() + result3 = index.memory_usage(deep=True) + + # RangeIndex, IntervalIndex + # don't have engines + # Index[EA] has engine but it does not have a Hashtable .mapping + if not isinstance(index, (RangeIndex, IntervalIndex)) and not ( + type(index) is Index and not isinstance(index.dtype, np.dtype) + ): + assert result2 > result + + if index.inferred_type == "object": + assert result3 > result2 + + def test_argsort(self, index): + if isinstance(index, CategoricalIndex): + pytest.skip(f"{type(self).__name__} separately tested") + + result = index.argsort() + expected = np.array(index).argsort() + tm.assert_numpy_array_equal(result, expected, check_dtype=False) + + def test_numpy_argsort(self, index): + result = np.argsort(index) + expected = index.argsort() + tm.assert_numpy_array_equal(result, expected) + + result = np.argsort(index, kind="mergesort") + expected = index.argsort(kind="mergesort") + tm.assert_numpy_array_equal(result, expected) + + # these are the only two types that perform + # pandas compatibility input validation - the + # rest already perform separate (or no) such + # validation via their 'values' attribute as + # defined in pandas.core.indexes/base.py - they + # cannot be changed at the moment due to + # backwards compatibility concerns + if isinstance(index, (CategoricalIndex, RangeIndex)): + msg = "the 'axis' parameter is not supported" + with pytest.raises(ValueError, match=msg): + np.argsort(index, axis=1) + + msg = "the 'order' parameter is not supported" + with pytest.raises(ValueError, match=msg): + np.argsort(index, order=("a", "b")) + + def test_repeat(self, simple_index): + rep = 2 + idx = simple_index.copy() + new_index_cls = idx._constructor + expected = new_index_cls(idx.values.repeat(rep), name=idx.name) + tm.assert_index_equal(idx.repeat(rep), expected) + + idx = simple_index + rep = np.arange(len(idx)) + expected = new_index_cls(idx.values.repeat(rep), name=idx.name) + tm.assert_index_equal(idx.repeat(rep), expected) + + def test_numpy_repeat(self, simple_index): + rep = 2 + idx = simple_index + expected = idx.repeat(rep) + tm.assert_index_equal(np.repeat(idx, rep), expected) + + msg = "the 'axis' parameter is not supported" + with pytest.raises(ValueError, match=msg): + np.repeat(idx, rep, axis=0) + + def test_where(self, listlike_box, simple_index): + if isinstance(simple_index, (IntervalIndex, PeriodIndex)) or is_numeric_dtype( + simple_index.dtype + ): + pytest.skip("Tested elsewhere.") + klass = listlike_box + + idx = simple_index + if isinstance(idx, (DatetimeIndex, TimedeltaIndex)): + # where does not preserve freq + idx = idx._with_freq(None) + + cond = [True] * len(idx) + result = idx.where(klass(cond)) + expected = idx + tm.assert_index_equal(result, expected) + + cond = [False] + [True] * len(idx[1:]) + expected = Index([idx._na_value] + idx[1:].tolist(), dtype=idx.dtype) + result = idx.where(klass(cond)) + tm.assert_index_equal(result, expected) + + def test_insert_base(self, index): + trimmed = index[1:4] + + if not len(index): + pytest.skip("Not applicable for empty index") + + # test 0th element + warn = None + if index.dtype == object and index.inferred_type == "boolean": + # GH#51363 + warn = FutureWarning + msg = "The behavior of Index.insert with object-dtype is deprecated" + with tm.assert_produces_warning(warn, match=msg): + result = trimmed.insert(0, index[0]) + assert index[0:4].equals(result) + + @pytest.mark.skipif( + using_pyarrow_string_dtype(), + reason="completely different behavior, tested elsewher", + ) + def test_insert_out_of_bounds(self, index): + # TypeError/IndexError matches what np.insert raises in these cases + + if len(index) > 0: + err = TypeError + else: + err = IndexError + if len(index) == 0: + # 0 vs 0.5 in error message varies with numpy version + msg = "index (0|0.5) is out of bounds for axis 0 with size 0" + else: + msg = "slice indices must be integers or None or have an __index__ method" + with pytest.raises(err, match=msg): + index.insert(0.5, "foo") + + msg = "|".join( + [ + r"index -?\d+ is out of bounds for axis 0 with size \d+", + "loc must be an integer between", + ] + ) + with pytest.raises(IndexError, match=msg): + index.insert(len(index) + 1, 1) + + with pytest.raises(IndexError, match=msg): + index.insert(-len(index) - 1, 1) + + def test_delete_base(self, index): + if not len(index): + pytest.skip("Not applicable for empty index") + + if isinstance(index, RangeIndex): + # tested in class + pytest.skip(f"{type(self).__name__} tested elsewhere") + + expected = index[1:] + result = index.delete(0) + assert result.equals(expected) + assert result.name == expected.name + + expected = index[:-1] + result = index.delete(-1) + assert result.equals(expected) + assert result.name == expected.name + + length = len(index) + msg = f"index {length} is out of bounds for axis 0 with size {length}" + with pytest.raises(IndexError, match=msg): + index.delete(length) + + @pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") + def test_equals(self, index): + if isinstance(index, IntervalIndex): + pytest.skip(f"{type(index).__name__} tested elsewhere") + + is_ea_idx = type(index) is Index and not isinstance(index.dtype, np.dtype) + + assert index.equals(index) + assert index.equals(index.copy()) + if not is_ea_idx: + # doesn't hold for e.g. IntegerDtype + assert index.equals(index.astype(object)) + + assert not index.equals(list(index)) + assert not index.equals(np.array(index)) + + # Cannot pass in non-int64 dtype to RangeIndex + if not isinstance(index, RangeIndex) and not is_ea_idx: + same_values = Index(index, dtype=object) + assert index.equals(same_values) + assert same_values.equals(index) + + if index.nlevels == 1: + # do not test MultiIndex + assert not index.equals(Series(index)) + + def test_equals_op(self, simple_index): + # GH9947, GH10637 + index_a = simple_index + + n = len(index_a) + index_b = index_a[0:-1] + index_c = index_a[0:-1].append(index_a[-2:-1]) + index_d = index_a[0:1] + + msg = "Lengths must match|could not be broadcast" + with pytest.raises(ValueError, match=msg): + index_a == index_b + expected1 = np.array([True] * n) + expected2 = np.array([True] * (n - 1) + [False]) + tm.assert_numpy_array_equal(index_a == index_a, expected1) + tm.assert_numpy_array_equal(index_a == index_c, expected2) + + # test comparisons with numpy arrays + array_a = np.array(index_a) + array_b = np.array(index_a[0:-1]) + array_c = np.array(index_a[0:-1].append(index_a[-2:-1])) + array_d = np.array(index_a[0:1]) + with pytest.raises(ValueError, match=msg): + index_a == array_b + tm.assert_numpy_array_equal(index_a == array_a, expected1) + tm.assert_numpy_array_equal(index_a == array_c, expected2) + + # test comparisons with Series + series_a = Series(array_a) + series_b = Series(array_b) + series_c = Series(array_c) + series_d = Series(array_d) + with pytest.raises(ValueError, match=msg): + index_a == series_b + + tm.assert_numpy_array_equal(index_a == series_a, expected1) + tm.assert_numpy_array_equal(index_a == series_c, expected2) + + # cases where length is 1 for one of them + with pytest.raises(ValueError, match="Lengths must match"): + index_a == index_d + with pytest.raises(ValueError, match="Lengths must match"): + index_a == series_d + with pytest.raises(ValueError, match="Lengths must match"): + index_a == array_d + msg = "Can only compare identically-labeled Series objects" + with pytest.raises(ValueError, match=msg): + series_a == series_d + with pytest.raises(ValueError, match="Lengths must match"): + series_a == array_d + + # comparing with a scalar should broadcast; note that we are excluding + # MultiIndex because in this case each item in the index is a tuple of + # length 2, and therefore is considered an array of length 2 in the + # comparison instead of a scalar + if not isinstance(index_a, MultiIndex): + expected3 = np.array([False] * (len(index_a) - 2) + [True, False]) + # assuming the 2nd to last item is unique in the data + item = index_a[-2] + tm.assert_numpy_array_equal(index_a == item, expected3) + tm.assert_series_equal(series_a == item, Series(expected3)) + + def test_format(self, simple_index): + # GH35439 + if is_numeric_dtype(simple_index.dtype) or isinstance( + simple_index, DatetimeIndex + ): + pytest.skip("Tested elsewhere.") + idx = simple_index + expected = [str(x) for x in idx] + msg = r"Index\.format is deprecated" + with tm.assert_produces_warning(FutureWarning, match=msg): + assert idx.format() == expected + + def test_format_empty(self, simple_index): + # GH35712 + if isinstance(simple_index, (PeriodIndex, RangeIndex)): + pytest.skip("Tested elsewhere") + empty_idx = type(simple_index)([]) + msg = r"Index\.format is deprecated" + with tm.assert_produces_warning(FutureWarning, match=msg): + assert empty_idx.format() == [] + with tm.assert_produces_warning(FutureWarning, match=msg): + assert empty_idx.format(name=True) == [""] + + def test_fillna(self, index): + # GH 11343 + if len(index) == 0: + pytest.skip("Not relevant for empty index") + elif index.dtype == bool: + pytest.skip(f"{index.dtype} cannot hold NAs") + elif isinstance(index, Index) and is_integer_dtype(index.dtype): + pytest.skip(f"Not relevant for Index with {index.dtype}") + elif isinstance(index, MultiIndex): + idx = index.copy(deep=True) + msg = "isna is not defined for MultiIndex" + with pytest.raises(NotImplementedError, match=msg): + idx.fillna(idx[0]) + else: + idx = index.copy(deep=True) + result = idx.fillna(idx[0]) + tm.assert_index_equal(result, idx) + assert result is not idx + + msg = "'value' must be a scalar, passed: " + with pytest.raises(TypeError, match=msg): + idx.fillna([idx[0]]) + + idx = index.copy(deep=True) + values = idx._values + + values[1] = np.nan + + idx = type(index)(values) + + msg = "does not support 'downcast'" + msg2 = r"The 'downcast' keyword in .*Index\.fillna is deprecated" + with tm.assert_produces_warning(FutureWarning, match=msg2): + with pytest.raises(NotImplementedError, match=msg): + # For now at least, we only raise if there are NAs present + idx.fillna(idx[0], downcast="infer") + + expected = np.array([False] * len(idx), dtype=bool) + expected[1] = True + tm.assert_numpy_array_equal(idx._isnan, expected) + assert idx.hasnans is True + + def test_nulls(self, index): + # this is really a smoke test for the methods + # as these are adequately tested for function elsewhere + if len(index) == 0: + tm.assert_numpy_array_equal(index.isna(), np.array([], dtype=bool)) + elif isinstance(index, MultiIndex): + idx = index.copy() + msg = "isna is not defined for MultiIndex" + with pytest.raises(NotImplementedError, match=msg): + idx.isna() + elif not index.hasnans: + tm.assert_numpy_array_equal(index.isna(), np.zeros(len(index), dtype=bool)) + tm.assert_numpy_array_equal(index.notna(), np.ones(len(index), dtype=bool)) + else: + result = isna(index) + tm.assert_numpy_array_equal(index.isna(), result) + tm.assert_numpy_array_equal(index.notna(), ~result) + + def test_empty(self, simple_index): + # GH 15270 + idx = simple_index + assert not idx.empty + assert idx[:0].empty + + def test_join_self_unique(self, join_type, simple_index): + idx = simple_index + if idx.is_unique: + joined = idx.join(idx, how=join_type) + expected = simple_index + if join_type == "outer": + expected = algos.safe_sort(expected) + tm.assert_index_equal(joined, expected) + + def test_map(self, simple_index): + # callable + if isinstance(simple_index, (TimedeltaIndex, PeriodIndex)): + pytest.skip("Tested elsewhere.") + idx = simple_index + + result = idx.map(lambda x: x) + # RangeIndex are equivalent to the similar Index with int64 dtype + tm.assert_index_equal(result, idx, exact="equiv") + + @pytest.mark.parametrize( + "mapper", + [ + lambda values, index: {i: e for e, i in zip(values, index)}, + lambda values, index: Series(values, index), + ], + ) + @pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") + def test_map_dictlike(self, mapper, simple_index, request): + idx = simple_index + if isinstance(idx, (DatetimeIndex, TimedeltaIndex, PeriodIndex)): + pytest.skip("Tested elsewhere.") + + identity = mapper(idx.values, idx) + + result = idx.map(identity) + # RangeIndex are equivalent to the similar Index with int64 dtype + tm.assert_index_equal(result, idx, exact="equiv") + + # empty mappable + dtype = None + if idx.dtype.kind == "f": + dtype = idx.dtype + + expected = Index([np.nan] * len(idx), dtype=dtype) + result = idx.map(mapper(expected, idx)) + tm.assert_index_equal(result, expected) + + def test_map_str(self, simple_index): + # GH 31202 + if isinstance(simple_index, CategoricalIndex): + pytest.skip("See test_map.py") + idx = simple_index + result = idx.map(str) + expected = Index([str(x) for x in idx]) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize("copy", [True, False]) + @pytest.mark.parametrize("name", [None, "foo"]) + @pytest.mark.parametrize("ordered", [True, False]) + def test_astype_category(self, copy, name, ordered, simple_index): + # GH 18630 + idx = simple_index + if name: + idx = idx.rename(name) + + # standard categories + dtype = CategoricalDtype(ordered=ordered) + result = idx.astype(dtype, copy=copy) + expected = CategoricalIndex(idx, name=name, ordered=ordered) + tm.assert_index_equal(result, expected, exact=True) + + # non-standard categories + dtype = CategoricalDtype(idx.unique().tolist()[:-1], ordered) + result = idx.astype(dtype, copy=copy) + expected = CategoricalIndex(idx, name=name, dtype=dtype) + tm.assert_index_equal(result, expected, exact=True) + + if ordered is False: + # dtype='category' defaults to ordered=False, so only test once + result = idx.astype("category", copy=copy) + expected = CategoricalIndex(idx, name=name) + tm.assert_index_equal(result, expected, exact=True) + + def test_is_unique(self, simple_index): + # initialize a unique index + index = simple_index.drop_duplicates() + assert index.is_unique is True + + # empty index should be unique + index_empty = index[:0] + assert index_empty.is_unique is True + + # test basic dupes + index_dup = index.insert(0, index[0]) + assert index_dup.is_unique is False + + # single NA should be unique + index_na = index.insert(0, np.nan) + assert index_na.is_unique is True + + # multiple NA should not be unique + index_na_dup = index_na.insert(0, np.nan) + assert index_na_dup.is_unique is False + + @pytest.mark.arm_slow + def test_engine_reference_cycle(self, simple_index): + # GH27585 + index = simple_index.copy() + ref = weakref.ref(index) + index._engine + del index + assert ref() is None + + def test_getitem_2d_deprecated(self, simple_index): + # GH#30588, GH#31479 + if isinstance(simple_index, IntervalIndex): + pytest.skip("Tested elsewhere") + idx = simple_index + msg = "Multi-dimensional indexing|too many|only" + with pytest.raises((ValueError, IndexError), match=msg): + idx[:, None] + + if not isinstance(idx, RangeIndex): + # GH#44051 RangeIndex already raised pre-2.0 with a different message + with pytest.raises((ValueError, IndexError), match=msg): + idx[True] + with pytest.raises((ValueError, IndexError), match=msg): + idx[False] + else: + msg = "only integers, slices" + with pytest.raises(IndexError, match=msg): + idx[True] + with pytest.raises(IndexError, match=msg): + idx[False] + + def test_copy_shares_cache(self, simple_index): + # GH32898, GH36840 + idx = simple_index + idx.get_loc(idx[0]) # populates the _cache. + copy = idx.copy() + + assert copy._cache is idx._cache + + def test_shallow_copy_shares_cache(self, simple_index): + # GH32669, GH36840 + idx = simple_index + idx.get_loc(idx[0]) # populates the _cache. + shallow_copy = idx._view() + + assert shallow_copy._cache is idx._cache + + shallow_copy = idx._shallow_copy(idx._data) + assert shallow_copy._cache is not idx._cache + assert shallow_copy._cache == {} + + def test_index_groupby(self, simple_index): + idx = simple_index[:5] + to_groupby = np.array([1, 2, np.nan, 2, 1]) + tm.assert_dict_equal( + idx.groupby(to_groupby), {1.0: idx[[0, 4]], 2.0: idx[[1, 3]]} + ) + + to_groupby = DatetimeIndex( + [ + datetime(2011, 11, 1), + datetime(2011, 12, 1), + pd.NaT, + datetime(2011, 12, 1), + datetime(2011, 11, 1), + ], + tz="UTC", + ).values + + ex_keys = [Timestamp("2011-11-01"), Timestamp("2011-12-01")] + expected = {ex_keys[0]: idx[[0, 4]], ex_keys[1]: idx[[1, 3]]} + tm.assert_dict_equal(idx.groupby(to_groupby), expected) + + def test_append_preserves_dtype(self, simple_index): + # In particular Index with dtype float32 + index = simple_index + N = len(index) + + result = index.append(index) + assert result.dtype == index.dtype + tm.assert_index_equal(result[:N], index, check_exact=True) + tm.assert_index_equal(result[N:], index, check_exact=True) + + alt = index.take(list(range(N)) * 2) + tm.assert_index_equal(result, alt, check_exact=True) + + def test_inv(self, simple_index, using_infer_string): + idx = simple_index + + if idx.dtype.kind in ["i", "u"]: + res = ~idx + expected = Index(~idx.values, name=idx.name) + tm.assert_index_equal(res, expected) + + # check that we are matching Series behavior + res2 = ~Series(idx) + tm.assert_series_equal(res2, Series(expected)) + else: + if idx.dtype.kind == "f": + err = TypeError + msg = "ufunc 'invert' not supported for the input types" + elif using_infer_string and idx.dtype == "string": + import pyarrow as pa + + err = pa.lib.ArrowNotImplementedError + msg = "has no kernel" + else: + err = TypeError + msg = "bad operand" + with pytest.raises(err, match=msg): + ~idx + + # check that we get the same behavior with Series + with pytest.raises(err, match=msg): + ~Series(idx) + + def test_is_boolean_is_deprecated(self, simple_index): + # GH50042 + idx = simple_index + with tm.assert_produces_warning(FutureWarning): + idx.is_boolean() + + def test_is_floating_is_deprecated(self, simple_index): + # GH50042 + idx = simple_index + with tm.assert_produces_warning(FutureWarning): + idx.is_floating() + + def test_is_integer_is_deprecated(self, simple_index): + # GH50042 + idx = simple_index + with tm.assert_produces_warning(FutureWarning): + idx.is_integer() + + def test_holds_integer_deprecated(self, simple_index): + # GH50243 + idx = simple_index + msg = f"{type(idx).__name__}.holds_integer is deprecated. " + with tm.assert_produces_warning(FutureWarning, match=msg): + idx.holds_integer() + + def test_is_numeric_is_deprecated(self, simple_index): + # GH50042 + idx = simple_index + with tm.assert_produces_warning( + FutureWarning, + match=f"{type(idx).__name__}.is_numeric is deprecated. ", + ): + idx.is_numeric() + + def test_is_categorical_is_deprecated(self, simple_index): + # GH50042 + idx = simple_index + with tm.assert_produces_warning( + FutureWarning, + match=r"Use pandas\.api\.types\.is_categorical_dtype instead", + ): + idx.is_categorical() + + def test_is_interval_is_deprecated(self, simple_index): + # GH50042 + idx = simple_index + with tm.assert_produces_warning(FutureWarning): + idx.is_interval() + + def test_is_object_is_deprecated(self, simple_index): + # GH50042 + idx = simple_index + with tm.assert_produces_warning(FutureWarning): + idx.is_object() + + +class TestNumericBase: + @pytest.fixture( + params=[ + RangeIndex(start=0, stop=20, step=2), + Index(np.arange(5, dtype=np.float64)), + Index(np.arange(5, dtype=np.float32)), + Index(np.arange(5, dtype=np.uint64)), + Index(range(0, 20, 2), dtype=np.int64), + Index(range(0, 20, 2), dtype=np.int32), + Index(range(0, 20, 2), dtype=np.int16), + Index(range(0, 20, 2), dtype=np.int8), + ] + ) + def simple_index(self, request): + return request.param + + def test_constructor_unwraps_index(self, simple_index): + if isinstance(simple_index, RangeIndex): + pytest.skip("Tested elsewhere.") + index_cls = type(simple_index) + dtype = simple_index.dtype + + idx = Index([1, 2], dtype=dtype) + result = index_cls(idx) + expected = np.array([1, 2], dtype=idx.dtype) + tm.assert_numpy_array_equal(result._data, expected) + + def test_can_hold_identifiers(self, simple_index): + idx = simple_index + key = idx[0] + assert idx._can_hold_identifiers_and_holds_name(key) is False + + def test_view(self, simple_index): + if isinstance(simple_index, RangeIndex): + pytest.skip("Tested elsewhere.") + index_cls = type(simple_index) + dtype = simple_index.dtype + + idx = index_cls([], dtype=dtype, name="Foo") + idx_view = idx.view() + assert idx_view.name == "Foo" + + idx_view = idx.view(dtype) + tm.assert_index_equal(idx, index_cls(idx_view, name="Foo"), exact=True) + + msg = "Passing a type in .*Index.view is deprecated" + with tm.assert_produces_warning(FutureWarning, match=msg): + idx_view = idx.view(index_cls) + tm.assert_index_equal(idx, index_cls(idx_view, name="Foo"), exact=True) + + def test_format(self, simple_index): + # GH35439 + if isinstance(simple_index, DatetimeIndex): + pytest.skip("Tested elsewhere") + idx = simple_index + max_width = max(len(str(x)) for x in idx) + expected = [str(x).ljust(max_width) for x in idx] + msg = r"Index\.format is deprecated" + with tm.assert_produces_warning(FutureWarning, match=msg): + assert idx.format() == expected + + def test_insert_non_na(self, simple_index): + # GH#43921 inserting an element that we know we can hold should + # not change dtype or type (except for RangeIndex) + index = simple_index + + result = index.insert(0, index[0]) + + expected = Index([index[0]] + list(index), dtype=index.dtype) + tm.assert_index_equal(result, expected, exact=True) + + def test_insert_na(self, nulls_fixture, simple_index): + # GH 18295 (test missing) + index = simple_index + na_val = nulls_fixture + + if na_val is pd.NaT: + expected = Index([index[0], pd.NaT] + list(index[1:]), dtype=object) + else: + expected = Index([index[0], np.nan] + list(index[1:])) + # GH#43921 we preserve float dtype + if index.dtype.kind == "f": + expected = Index(expected, dtype=index.dtype) + + result = index.insert(1, na_val) + tm.assert_index_equal(result, expected, exact=True) + + def test_arithmetic_explicit_conversions(self, simple_index): + # GH 8608 + # add/sub are overridden explicitly for Float/Int Index + index_cls = type(simple_index) + if index_cls is RangeIndex: + idx = RangeIndex(5) + else: + idx = index_cls(np.arange(5, dtype="int64")) + + # float conversions + arr = np.arange(5, dtype="int64") * 3.2 + expected = Index(arr, dtype=np.float64) + fidx = idx * 3.2 + tm.assert_index_equal(fidx, expected) + fidx = 3.2 * idx + tm.assert_index_equal(fidx, expected) + + # interops with numpy arrays + expected = Index(arr, dtype=np.float64) + a = np.zeros(5, dtype="float64") + result = fidx - a + tm.assert_index_equal(result, expected) + + expected = Index(-arr, dtype=np.float64) + a = np.zeros(5, dtype="float64") + result = a - fidx + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize("complex_dtype", [np.complex64, np.complex128]) + def test_astype_to_complex(self, complex_dtype, simple_index): + result = simple_index.astype(complex_dtype) + + assert type(result) is Index and result.dtype == complex_dtype + + def test_cast_string(self, simple_index): + if isinstance(simple_index, RangeIndex): + pytest.skip("casting of strings not relevant for RangeIndex") + result = type(simple_index)(["0", "1", "2"], dtype=simple_index.dtype) + expected = type(simple_index)([0, 1, 2], dtype=simple_index.dtype) + tm.assert_index_equal(result, expected) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_setops.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_setops.py new file mode 100644 index 0000000000000000000000000000000000000000..4a6982cf98670b43cfb87f5f3ea5a4edd5a7fd36 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_setops.py @@ -0,0 +1,959 @@ +""" +The tests in this package are to ensure the proper resultant dtypes of +set operations. +""" +from datetime import datetime +import operator + +import numpy as np +import pytest + +from pandas._libs import lib + +from pandas.core.dtypes.cast import find_common_type + +from pandas import ( + CategoricalDtype, + CategoricalIndex, + DatetimeTZDtype, + Index, + MultiIndex, + PeriodDtype, + RangeIndex, + Series, + Timestamp, +) +import pandas._testing as tm +from pandas.api.types import ( + is_signed_integer_dtype, + pandas_dtype, +) + + +def equal_contents(arr1, arr2) -> bool: + """ + Checks if the set of unique elements of arr1 and arr2 are equivalent. + """ + return frozenset(arr1) == frozenset(arr2) + + +@pytest.fixture( + params=tm.ALL_REAL_NUMPY_DTYPES + + [ + "object", + "category", + "datetime64[ns]", + "timedelta64[ns]", + ] +) +def any_dtype_for_small_pos_integer_indexes(request): + """ + Dtypes that can be given to an Index with small positive integers. + + This means that for any dtype `x` in the params list, `Index([1, 2, 3], dtype=x)` is + valid and gives the correct Index (sub-)class. + """ + return request.param + + +def test_union_same_types(index): + # Union with a non-unique, non-monotonic index raises error + # Only needed for bool index factory + idx1 = index.sort_values() + idx2 = index.sort_values() + assert idx1.union(idx2).dtype == idx1.dtype + + +def test_union_different_types(index_flat, index_flat2, request): + # This test only considers combinations of indices + # GH 23525 + idx1 = index_flat + idx2 = index_flat2 + + if ( + not idx1.is_unique + and not idx2.is_unique + and idx1.dtype.kind == "i" + and idx2.dtype.kind == "b" + ) or ( + not idx2.is_unique + and not idx1.is_unique + and idx2.dtype.kind == "i" + and idx1.dtype.kind == "b" + ): + # Each condition had idx[1|2].is_monotonic_decreasing + # but failed when e.g. + # idx1 = Index( + # [True, True, True, True, True, True, True, True, False, False], dtype='bool' + # ) + # idx2 = Index([0, 0, 1, 1, 2, 2], dtype='int64') + mark = pytest.mark.xfail( + reason="GH#44000 True==1", raises=ValueError, strict=False + ) + request.applymarker(mark) + + common_dtype = find_common_type([idx1.dtype, idx2.dtype]) + + warn = None + msg = "'<' not supported between" + if not len(idx1) or not len(idx2): + pass + elif (idx1.dtype.kind == "c" and (not lib.is_np_dtype(idx2.dtype, "iufc"))) or ( + idx2.dtype.kind == "c" and (not lib.is_np_dtype(idx1.dtype, "iufc")) + ): + # complex objects non-sortable + warn = RuntimeWarning + elif ( + isinstance(idx1.dtype, PeriodDtype) and isinstance(idx2.dtype, CategoricalDtype) + ) or ( + isinstance(idx2.dtype, PeriodDtype) and isinstance(idx1.dtype, CategoricalDtype) + ): + warn = FutureWarning + msg = r"PeriodDtype\[B\] is deprecated" + mark = pytest.mark.xfail( + reason="Warning not produced on all builds", + raises=AssertionError, + strict=False, + ) + request.applymarker(mark) + + any_uint64 = np.uint64 in (idx1.dtype, idx2.dtype) + idx1_signed = is_signed_integer_dtype(idx1.dtype) + idx2_signed = is_signed_integer_dtype(idx2.dtype) + + # Union with a non-unique, non-monotonic index raises error + # This applies to the boolean index + idx1 = idx1.sort_values() + idx2 = idx2.sort_values() + + with tm.assert_produces_warning(warn, match=msg): + res1 = idx1.union(idx2) + res2 = idx2.union(idx1) + + if any_uint64 and (idx1_signed or idx2_signed): + assert res1.dtype == np.dtype("O") + assert res2.dtype == np.dtype("O") + else: + assert res1.dtype == common_dtype + assert res2.dtype == common_dtype + + +@pytest.mark.parametrize( + "idx1,idx2", + [ + (Index(np.arange(5), dtype=np.int64), RangeIndex(5)), + (Index(np.arange(5), dtype=np.float64), Index(np.arange(5), dtype=np.int64)), + (Index(np.arange(5), dtype=np.float64), RangeIndex(5)), + (Index(np.arange(5), dtype=np.float64), Index(np.arange(5), dtype=np.uint64)), + ], +) +def test_compatible_inconsistent_pairs(idx1, idx2): + # GH 23525 + res1 = idx1.union(idx2) + res2 = idx2.union(idx1) + + assert res1.dtype in (idx1.dtype, idx2.dtype) + assert res2.dtype in (idx1.dtype, idx2.dtype) + + +@pytest.mark.parametrize( + "left, right, expected", + [ + ("int64", "int64", "int64"), + ("int64", "uint64", "object"), + ("int64", "float64", "float64"), + ("uint64", "float64", "float64"), + ("uint64", "uint64", "uint64"), + ("float64", "float64", "float64"), + ("datetime64[ns]", "int64", "object"), + ("datetime64[ns]", "uint64", "object"), + ("datetime64[ns]", "float64", "object"), + ("datetime64[ns, CET]", "int64", "object"), + ("datetime64[ns, CET]", "uint64", "object"), + ("datetime64[ns, CET]", "float64", "object"), + ("Period[D]", "int64", "object"), + ("Period[D]", "uint64", "object"), + ("Period[D]", "float64", "object"), + ], +) +@pytest.mark.parametrize("names", [("foo", "foo", "foo"), ("foo", "bar", None)]) +def test_union_dtypes(left, right, expected, names): + left = pandas_dtype(left) + right = pandas_dtype(right) + a = Index([], dtype=left, name=names[0]) + b = Index([], dtype=right, name=names[1]) + result = a.union(b) + assert result.dtype == expected + assert result.name == names[2] + + # Testing name retention + # TODO: pin down desired dtype; do we want it to be commutative? + result = a.intersection(b) + assert result.name == names[2] + + +@pytest.mark.parametrize("values", [[1, 2, 2, 3], [3, 3]]) +def test_intersection_duplicates(values): + # GH#31326 + a = Index(values) + b = Index([3, 3]) + result = a.intersection(b) + expected = Index([3]) + tm.assert_index_equal(result, expected) + + +class TestSetOps: + # Set operation tests shared by all indexes in the `index` fixture + @pytest.mark.parametrize("case", [0.5, "xxx"]) + @pytest.mark.parametrize( + "method", ["intersection", "union", "difference", "symmetric_difference"] + ) + def test_set_ops_error_cases(self, case, method, index): + # non-iterable input + msg = "Input must be Index or array-like" + with pytest.raises(TypeError, match=msg): + getattr(index, method)(case) + + @pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") + def test_intersection_base(self, index): + if isinstance(index, CategoricalIndex): + pytest.skip(f"Not relevant for {type(index).__name__}") + + first = index[:5].unique() + second = index[:3].unique() + intersect = first.intersection(second) + tm.assert_index_equal(intersect, second) + + if isinstance(index.dtype, DatetimeTZDtype): + # The second.values below will drop tz, so the rest of this test + # is not applicable. + return + + # GH#10149 + cases = [second.to_numpy(), second.to_series(), second.to_list()] + for case in cases: + result = first.intersection(case) + assert equal_contents(result, second) + + if isinstance(index, MultiIndex): + msg = "other must be a MultiIndex or a list of tuples" + with pytest.raises(TypeError, match=msg): + first.intersection([1, 2, 3]) + + @pytest.mark.filterwarnings( + "ignore:Falling back on a non-pyarrow:pandas.errors.PerformanceWarning" + ) + @pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") + def test_union_base(self, index): + index = index.unique() + first = index[3:] + second = index[:5] + everything = index + + union = first.union(second) + tm.assert_index_equal(union.sort_values(), everything.sort_values()) + + if isinstance(index.dtype, DatetimeTZDtype): + # The second.values below will drop tz, so the rest of this test + # is not applicable. + return + + # GH#10149 + cases = [second.to_numpy(), second.to_series(), second.to_list()] + for case in cases: + result = first.union(case) + assert equal_contents(result, everything) + + if isinstance(index, MultiIndex): + msg = "other must be a MultiIndex or a list of tuples" + with pytest.raises(TypeError, match=msg): + first.union([1, 2, 3]) + + @pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") + @pytest.mark.filterwarnings( + "ignore:Falling back on a non-pyarrow:pandas.errors.PerformanceWarning" + ) + def test_difference_base(self, sort, index): + first = index[2:] + second = index[:4] + if index.inferred_type == "boolean": + # i think (TODO: be sure) there assumptions baked in about + # the index fixture that don't hold here? + answer = set(first).difference(set(second)) + elif isinstance(index, CategoricalIndex): + answer = [] + else: + answer = index[4:] + result = first.difference(second, sort) + assert equal_contents(result, answer) + + # GH#10149 + cases = [second.to_numpy(), second.to_series(), second.to_list()] + for case in cases: + result = first.difference(case, sort) + assert equal_contents(result, answer) + + if isinstance(index, MultiIndex): + msg = "other must be a MultiIndex or a list of tuples" + with pytest.raises(TypeError, match=msg): + first.difference([1, 2, 3], sort) + + @pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") + @pytest.mark.filterwarnings( + "ignore:Falling back on a non-pyarrow:pandas.errors.PerformanceWarning" + ) + def test_symmetric_difference(self, index): + if isinstance(index, CategoricalIndex): + pytest.skip(f"Not relevant for {type(index).__name__}") + if len(index) < 2: + pytest.skip("Too few values for test") + if index[0] in index[1:] or index[-1] in index[:-1]: + # index fixture has e.g. an index of bools that does not satisfy this, + # another with [0, 0, 1, 1, 2, 2] + pytest.skip("Index values no not satisfy test condition.") + + first = index[1:] + second = index[:-1] + answer = index[[0, -1]] + result = first.symmetric_difference(second) + tm.assert_index_equal(result.sort_values(), answer.sort_values()) + + # GH#10149 + cases = [second.to_numpy(), second.to_series(), second.to_list()] + for case in cases: + result = first.symmetric_difference(case) + assert equal_contents(result, answer) + + if isinstance(index, MultiIndex): + msg = "other must be a MultiIndex or a list of tuples" + with pytest.raises(TypeError, match=msg): + first.symmetric_difference([1, 2, 3]) + + @pytest.mark.parametrize( + "fname, sname, expected_name", + [ + ("A", "A", "A"), + ("A", "B", None), + ("A", None, None), + (None, "B", None), + (None, None, None), + ], + ) + def test_corner_union(self, index_flat, fname, sname, expected_name): + # GH#9943, GH#9862 + # Test unions with various name combinations + # Do not test MultiIndex or repeats + if not index_flat.is_unique: + index = index_flat.unique() + else: + index = index_flat + + # Test copy.union(copy) + first = index.copy().set_names(fname) + second = index.copy().set_names(sname) + union = first.union(second) + expected = index.copy().set_names(expected_name) + tm.assert_index_equal(union, expected) + + # Test copy.union(empty) + first = index.copy().set_names(fname) + second = index.drop(index).set_names(sname) + union = first.union(second) + expected = index.copy().set_names(expected_name) + tm.assert_index_equal(union, expected) + + # Test empty.union(copy) + first = index.drop(index).set_names(fname) + second = index.copy().set_names(sname) + union = first.union(second) + expected = index.copy().set_names(expected_name) + tm.assert_index_equal(union, expected) + + # Test empty.union(empty) + first = index.drop(index).set_names(fname) + second = index.drop(index).set_names(sname) + union = first.union(second) + expected = index.drop(index).set_names(expected_name) + tm.assert_index_equal(union, expected) + + @pytest.mark.parametrize( + "fname, sname, expected_name", + [ + ("A", "A", "A"), + ("A", "B", None), + ("A", None, None), + (None, "B", None), + (None, None, None), + ], + ) + def test_union_unequal(self, index_flat, fname, sname, expected_name): + if not index_flat.is_unique: + index = index_flat.unique() + else: + index = index_flat + + # test copy.union(subset) - need sort for unicode and string + first = index.copy().set_names(fname) + second = index[1:].set_names(sname) + union = first.union(second).sort_values() + expected = index.set_names(expected_name).sort_values() + tm.assert_index_equal(union, expected) + + @pytest.mark.parametrize( + "fname, sname, expected_name", + [ + ("A", "A", "A"), + ("A", "B", None), + ("A", None, None), + (None, "B", None), + (None, None, None), + ], + ) + def test_corner_intersect(self, index_flat, fname, sname, expected_name): + # GH#35847 + # Test intersections with various name combinations + if not index_flat.is_unique: + index = index_flat.unique() + else: + index = index_flat + + # Test copy.intersection(copy) + first = index.copy().set_names(fname) + second = index.copy().set_names(sname) + intersect = first.intersection(second) + expected = index.copy().set_names(expected_name) + tm.assert_index_equal(intersect, expected) + + # Test copy.intersection(empty) + first = index.copy().set_names(fname) + second = index.drop(index).set_names(sname) + intersect = first.intersection(second) + expected = index.drop(index).set_names(expected_name) + tm.assert_index_equal(intersect, expected) + + # Test empty.intersection(copy) + first = index.drop(index).set_names(fname) + second = index.copy().set_names(sname) + intersect = first.intersection(second) + expected = index.drop(index).set_names(expected_name) + tm.assert_index_equal(intersect, expected) + + # Test empty.intersection(empty) + first = index.drop(index).set_names(fname) + second = index.drop(index).set_names(sname) + intersect = first.intersection(second) + expected = index.drop(index).set_names(expected_name) + tm.assert_index_equal(intersect, expected) + + @pytest.mark.parametrize( + "fname, sname, expected_name", + [ + ("A", "A", "A"), + ("A", "B", None), + ("A", None, None), + (None, "B", None), + (None, None, None), + ], + ) + def test_intersect_unequal(self, index_flat, fname, sname, expected_name): + if not index_flat.is_unique: + index = index_flat.unique() + else: + index = index_flat + + # test copy.intersection(subset) - need sort for unicode and string + first = index.copy().set_names(fname) + second = index[1:].set_names(sname) + intersect = first.intersection(second).sort_values() + expected = index[1:].set_names(expected_name).sort_values() + tm.assert_index_equal(intersect, expected) + + @pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") + def test_intersection_name_retention_with_nameless(self, index): + if isinstance(index, MultiIndex): + index = index.rename(list(range(index.nlevels))) + else: + index = index.rename("foo") + + other = np.asarray(index) + + result = index.intersection(other) + assert result.name == index.name + + # empty other, same dtype + result = index.intersection(other[:0]) + assert result.name == index.name + + # empty `self` + result = index[:0].intersection(other) + assert result.name == index.name + + def test_difference_preserves_type_empty(self, index, sort): + # GH#20040 + # If taking difference of a set and itself, it + # needs to preserve the type of the index + if not index.is_unique: + pytest.skip("Not relevant since index is not unique") + result = index.difference(index, sort=sort) + expected = index[:0] + tm.assert_index_equal(result, expected, exact=True) + + def test_difference_name_retention_equals(self, index, names): + if isinstance(index, MultiIndex): + names = [[x] * index.nlevels for x in names] + index = index.rename(names[0]) + other = index.rename(names[1]) + + assert index.equals(other) + + result = index.difference(other) + expected = index[:0].rename(names[2]) + tm.assert_index_equal(result, expected) + + def test_intersection_difference_match_empty(self, index, sort): + # GH#20040 + # Test that the intersection of an index with an + # empty index produces the same index as the difference + # of an index with itself. Test for all types + if not index.is_unique: + pytest.skip("Not relevant because index is not unique") + inter = index.intersection(index[:0]) + diff = index.difference(index, sort=sort) + tm.assert_index_equal(inter, diff, exact=True) + + +@pytest.mark.filterwarnings(r"ignore:PeriodDtype\[B\] is deprecated:FutureWarning") +@pytest.mark.filterwarnings( + "ignore:Falling back on a non-pyarrow:pandas.errors.PerformanceWarning" +) +@pytest.mark.parametrize( + "method", ["intersection", "union", "difference", "symmetric_difference"] +) +def test_setop_with_categorical(index_flat, sort, method): + # MultiIndex tested separately in tests.indexes.multi.test_setops + index = index_flat + + other = index.astype("category") + exact = "equiv" if isinstance(index, RangeIndex) else True + + result = getattr(index, method)(other, sort=sort) + expected = getattr(index, method)(index, sort=sort) + tm.assert_index_equal(result, expected, exact=exact) + + result = getattr(index, method)(other[:5], sort=sort) + expected = getattr(index, method)(index[:5], sort=sort) + tm.assert_index_equal(result, expected, exact=exact) + + +def test_intersection_duplicates_all_indexes(index): + # GH#38743 + if index.empty: + # No duplicates in empty indexes + pytest.skip("Not relevant for empty Index") + + idx = index + idx_non_unique = idx[[0, 0, 1, 2]] + + assert idx.intersection(idx_non_unique).equals(idx_non_unique.intersection(idx)) + assert idx.intersection(idx_non_unique).is_unique + + +def test_union_duplicate_index_subsets_of_each_other( + any_dtype_for_small_pos_integer_indexes, +): + # GH#31326 + dtype = any_dtype_for_small_pos_integer_indexes + a = Index([1, 2, 2, 3], dtype=dtype) + b = Index([3, 3, 4], dtype=dtype) + + expected = Index([1, 2, 2, 3, 3, 4], dtype=dtype) + if isinstance(a, CategoricalIndex): + expected = Index([1, 2, 2, 3, 3, 4]) + result = a.union(b) + tm.assert_index_equal(result, expected) + result = a.union(b, sort=False) + tm.assert_index_equal(result, expected) + + +def test_union_with_duplicate_index_and_non_monotonic( + any_dtype_for_small_pos_integer_indexes, +): + # GH#36289 + dtype = any_dtype_for_small_pos_integer_indexes + a = Index([1, 0, 0], dtype=dtype) + b = Index([0, 1], dtype=dtype) + expected = Index([0, 0, 1], dtype=dtype) + + result = a.union(b) + tm.assert_index_equal(result, expected) + + result = b.union(a) + tm.assert_index_equal(result, expected) + + +def test_union_duplicate_index_different_dtypes(): + # GH#36289 + a = Index([1, 2, 2, 3]) + b = Index(["1", "0", "0"]) + expected = Index([1, 2, 2, 3, "1", "0", "0"]) + result = a.union(b, sort=False) + tm.assert_index_equal(result, expected) + + +def test_union_same_value_duplicated_in_both(): + # GH#36289 + a = Index([0, 0, 1]) + b = Index([0, 0, 1, 2]) + result = a.union(b) + expected = Index([0, 0, 1, 2]) + tm.assert_index_equal(result, expected) + + +@pytest.mark.parametrize("dup", [1, np.nan]) +def test_union_nan_in_both(dup): + # GH#36289 + a = Index([np.nan, 1, 2, 2]) + b = Index([np.nan, dup, 1, 2]) + result = a.union(b, sort=False) + expected = Index([np.nan, dup, 1.0, 2.0, 2.0]) + tm.assert_index_equal(result, expected) + + +def test_union_rangeindex_sort_true(): + # GH 53490 + idx1 = RangeIndex(1, 100, 6) + idx2 = RangeIndex(1, 50, 3) + result = idx1.union(idx2, sort=True) + expected = Index( + [ + 1, + 4, + 7, + 10, + 13, + 16, + 19, + 22, + 25, + 28, + 31, + 34, + 37, + 40, + 43, + 46, + 49, + 55, + 61, + 67, + 73, + 79, + 85, + 91, + 97, + ] + ) + tm.assert_index_equal(result, expected) + + +def test_union_with_duplicate_index_not_subset_and_non_monotonic( + any_dtype_for_small_pos_integer_indexes, +): + # GH#36289 + dtype = any_dtype_for_small_pos_integer_indexes + a = Index([1, 0, 2], dtype=dtype) + b = Index([0, 0, 1], dtype=dtype) + expected = Index([0, 0, 1, 2], dtype=dtype) + if isinstance(a, CategoricalIndex): + expected = Index([0, 0, 1, 2]) + + result = a.union(b) + tm.assert_index_equal(result, expected) + + result = b.union(a) + tm.assert_index_equal(result, expected) + + +def test_union_int_categorical_with_nan(): + ci = CategoricalIndex([1, 2, np.nan]) + assert ci.categories.dtype.kind == "i" + + idx = Index([1, 2]) + + result = idx.union(ci) + expected = Index([1, 2, np.nan], dtype=np.float64) + tm.assert_index_equal(result, expected) + + result = ci.union(idx) + tm.assert_index_equal(result, expected) + + +class TestSetOpsUnsorted: + # These may eventually belong in a dtype-specific test_setops, or + # parametrized over a more general fixture + def test_intersect_str_dates(self): + dt_dates = [datetime(2012, 2, 9), datetime(2012, 2, 22)] + + index1 = Index(dt_dates, dtype=object) + index2 = Index(["aa"], dtype=object) + result = index2.intersection(index1) + + expected = Index([], dtype=object) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize("index", ["string"], indirect=True) + def test_intersection(self, index, sort): + first = index[:20] + second = index[:10] + intersect = first.intersection(second, sort=sort) + if sort in (None, False): + tm.assert_index_equal(intersect.sort_values(), second.sort_values()) + else: + tm.assert_index_equal(intersect, second) + + # Corner cases + inter = first.intersection(first, sort=sort) + assert inter is first + + @pytest.mark.parametrize( + "index2,keeps_name", + [ + (Index([3, 4, 5, 6, 7], name="index"), True), # preserve same name + (Index([3, 4, 5, 6, 7], name="other"), False), # drop diff names + (Index([3, 4, 5, 6, 7]), False), + ], + ) + def test_intersection_name_preservation(self, index2, keeps_name, sort): + index1 = Index([1, 2, 3, 4, 5], name="index") + expected = Index([3, 4, 5]) + result = index1.intersection(index2, sort) + + if keeps_name: + expected.name = "index" + + assert result.name == expected.name + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize("index", ["string"], indirect=True) + @pytest.mark.parametrize( + "first_name,second_name,expected_name", + [("A", "A", "A"), ("A", "B", None), (None, "B", None)], + ) + def test_intersection_name_preservation2( + self, index, first_name, second_name, expected_name, sort + ): + first = index[5:20] + second = index[:10] + first.name = first_name + second.name = second_name + intersect = first.intersection(second, sort=sort) + assert intersect.name == expected_name + + def test_chained_union(self, sort): + # Chained unions handles names correctly + i1 = Index([1, 2], name="i1") + i2 = Index([5, 6], name="i2") + i3 = Index([3, 4], name="i3") + union = i1.union(i2.union(i3, sort=sort), sort=sort) + expected = i1.union(i2, sort=sort).union(i3, sort=sort) + tm.assert_index_equal(union, expected) + + j1 = Index([1, 2], name="j1") + j2 = Index([], name="j2") + j3 = Index([], name="j3") + union = j1.union(j2.union(j3, sort=sort), sort=sort) + expected = j1.union(j2, sort=sort).union(j3, sort=sort) + tm.assert_index_equal(union, expected) + + @pytest.mark.parametrize("index", ["string"], indirect=True) + def test_union(self, index, sort): + first = index[5:20] + second = index[:10] + everything = index[:20] + + union = first.union(second, sort=sort) + if sort in (None, False): + tm.assert_index_equal(union.sort_values(), everything.sort_values()) + else: + tm.assert_index_equal(union, everything) + + @pytest.mark.parametrize("klass", [np.array, Series, list]) + @pytest.mark.parametrize("index", ["string"], indirect=True) + def test_union_from_iterables(self, index, klass, sort): + # GH#10149 + first = index[5:20] + second = index[:10] + everything = index[:20] + + case = klass(second.values) + result = first.union(case, sort=sort) + if sort in (None, False): + tm.assert_index_equal(result.sort_values(), everything.sort_values()) + else: + tm.assert_index_equal(result, everything) + + @pytest.mark.parametrize("index", ["string"], indirect=True) + def test_union_identity(self, index, sort): + first = index[5:20] + + union = first.union(first, sort=sort) + # i.e. identity is not preserved when sort is True + assert (union is first) is (not sort) + + # This should no longer be the same object, since [] is not consistent, + # both objects will be recast to dtype('O') + union = first.union(Index([], dtype=first.dtype), sort=sort) + assert (union is first) is (not sort) + + union = Index([], dtype=first.dtype).union(first, sort=sort) + assert (union is first) is (not sort) + + @pytest.mark.parametrize("index", ["string"], indirect=True) + @pytest.mark.parametrize("second_name,expected", [(None, None), ("name", "name")]) + def test_difference_name_preservation(self, index, second_name, expected, sort): + first = index[5:20] + second = index[:10] + answer = index[10:20] + + first.name = "name" + second.name = second_name + result = first.difference(second, sort=sort) + + if sort is True: + tm.assert_index_equal(result, answer) + else: + answer.name = second_name + tm.assert_index_equal(result.sort_values(), answer.sort_values()) + + if expected is None: + assert result.name is None + else: + assert result.name == expected + + def test_difference_empty_arg(self, index, sort): + first = index.copy() + first = first[5:20] + first.name = "name" + result = first.difference([], sort) + expected = index[5:20].unique() + expected.name = "name" + tm.assert_index_equal(result, expected) + + def test_difference_should_not_compare(self): + # GH 55113 + left = Index([1, 1]) + right = Index([True]) + result = left.difference(right) + expected = Index([1]) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize("index", ["string"], indirect=True) + def test_difference_identity(self, index, sort): + first = index[5:20] + first.name = "name" + result = first.difference(first, sort) + + assert len(result) == 0 + assert result.name == first.name + + @pytest.mark.parametrize("index", ["string"], indirect=True) + def test_difference_sort(self, index, sort): + first = index[5:20] + second = index[:10] + + result = first.difference(second, sort) + expected = index[10:20] + + if sort is None: + expected = expected.sort_values() + + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize("opname", ["difference", "symmetric_difference"]) + def test_difference_incomparable(self, opname): + a = Index([3, Timestamp("2000"), 1]) + b = Index([2, Timestamp("1999"), 1]) + op = operator.methodcaller(opname, b) + + with tm.assert_produces_warning(RuntimeWarning): + # sort=None, the default + result = op(a) + expected = Index([3, Timestamp("2000"), 2, Timestamp("1999")]) + if opname == "difference": + expected = expected[:2] + tm.assert_index_equal(result, expected) + + # sort=False + op = operator.methodcaller(opname, b, sort=False) + result = op(a) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize("opname", ["difference", "symmetric_difference"]) + def test_difference_incomparable_true(self, opname): + a = Index([3, Timestamp("2000"), 1]) + b = Index([2, Timestamp("1999"), 1]) + op = operator.methodcaller(opname, b, sort=True) + + msg = "'<' not supported between instances of 'Timestamp' and 'int'" + with pytest.raises(TypeError, match=msg): + op(a) + + def test_symmetric_difference_mi(self, sort): + index1 = MultiIndex.from_tuples(zip(["foo", "bar", "baz"], [1, 2, 3])) + index2 = MultiIndex.from_tuples([("foo", 1), ("bar", 3)]) + result = index1.symmetric_difference(index2, sort=sort) + expected = MultiIndex.from_tuples([("bar", 2), ("baz", 3), ("bar", 3)]) + if sort is None: + expected = expected.sort_values() + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize( + "index2,expected", + [ + (Index([0, 1, np.nan]), Index([2.0, 3.0, 0.0])), + (Index([0, 1]), Index([np.nan, 2.0, 3.0, 0.0])), + ], + ) + def test_symmetric_difference_missing(self, index2, expected, sort): + # GH#13514 change: {nan} - {nan} == {} + # (GH#6444, sorting of nans, is no longer an issue) + index1 = Index([1, np.nan, 2, 3]) + + result = index1.symmetric_difference(index2, sort=sort) + if sort is None: + expected = expected.sort_values() + tm.assert_index_equal(result, expected) + + def test_symmetric_difference_non_index(self, sort): + index1 = Index([1, 2, 3, 4], name="index1") + index2 = np.array([2, 3, 4, 5]) + expected = Index([1, 5], name="index1") + result = index1.symmetric_difference(index2, sort=sort) + if sort in (None, True): + tm.assert_index_equal(result, expected) + else: + tm.assert_index_equal(result.sort_values(), expected) + assert result.name == "index1" + + result = index1.symmetric_difference(index2, result_name="new_name", sort=sort) + expected.name = "new_name" + if sort in (None, True): + tm.assert_index_equal(result, expected) + else: + tm.assert_index_equal(result.sort_values(), expected) + assert result.name == "new_name" + + def test_union_ea_dtypes(self, any_numeric_ea_and_arrow_dtype): + # GH#51365 + idx = Index([1, 2, 3], dtype=any_numeric_ea_and_arrow_dtype) + idx2 = Index([3, 4, 5], dtype=any_numeric_ea_and_arrow_dtype) + result = idx.union(idx2) + expected = Index([1, 2, 3, 4, 5], dtype=any_numeric_ea_and_arrow_dtype) + tm.assert_index_equal(result, expected) + + def test_union_string_array(self, any_string_dtype): + idx1 = Index(["a"], dtype=any_string_dtype) + idx2 = Index(["b"], dtype=any_string_dtype) + result = idx1.union(idx2) + expected = Index(["a", "b"], dtype=any_string_dtype) + tm.assert_index_equal(result, expected) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_subclass.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_subclass.py new file mode 100644 index 0000000000000000000000000000000000000000..c3287e1ddcddcedc14857f2299798d3957830921 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/test_subclass.py @@ -0,0 +1,40 @@ +""" +Tests involving custom Index subclasses +""" +import numpy as np + +from pandas import ( + DataFrame, + Index, +) +import pandas._testing as tm + + +class CustomIndex(Index): + def __new__(cls, data, name=None): + # assert that this index class cannot hold strings + if any(isinstance(val, str) for val in data): + raise TypeError("CustomIndex cannot hold strings") + + if name is None and hasattr(data, "name"): + name = data.name + data = np.array(data, dtype="O") + + return cls._simple_new(data, name) + + +def test_insert_fallback_to_base_index(): + # https://github.com/pandas-dev/pandas/issues/47071 + + idx = CustomIndex([1, 2, 3]) + result = idx.insert(0, "string") + expected = Index(["string", 1, 2, 3], dtype=object) + tm.assert_index_equal(result, expected) + + df = DataFrame( + np.random.default_rng(2).standard_normal((2, 3)), + columns=idx, + index=Index([1, 2], name="string"), + ) + result = df.reset_index() + tm.assert_index_equal(result.columns, expected) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/__init__.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/__init__.py new file mode 100644 index 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a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/methods/__pycache__/test_factorize.cpython-310.pyc b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/methods/__pycache__/test_factorize.cpython-310.pyc new file mode 100644 index 0000000000000000000000000000000000000000..0db14436d74d246ea6ed7b64d51226e4b1b969f2 Binary files /dev/null and b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/methods/__pycache__/test_factorize.cpython-310.pyc differ diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/methods/test_astype.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/methods/test_astype.py new file mode 100644 index 0000000000000000000000000000000000000000..311f2b5c9aa598de68543825d1bde9dc814b469e --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/methods/test_astype.py @@ -0,0 +1,176 @@ +from datetime import timedelta + +import numpy as np +import pytest + +import pandas as pd +from pandas import ( + Index, + NaT, + Timedelta, + TimedeltaIndex, + timedelta_range, +) +import pandas._testing as tm +from pandas.core.arrays import TimedeltaArray + + +class TestTimedeltaIndex: + def test_astype_object(self): + idx = timedelta_range(start="1 days", periods=4, freq="D", name="idx") + expected_list = [ + Timedelta("1 days"), + Timedelta("2 days"), + Timedelta("3 days"), + Timedelta("4 days"), + ] + result = idx.astype(object) + expected = Index(expected_list, dtype=object, name="idx") + tm.assert_index_equal(result, expected) + assert idx.tolist() == expected_list + + def test_astype_object_with_nat(self): + idx = TimedeltaIndex( + [timedelta(days=1), timedelta(days=2), NaT, timedelta(days=4)], name="idx" + ) + expected_list = [ + Timedelta("1 days"), + Timedelta("2 days"), + NaT, + Timedelta("4 days"), + ] + result = idx.astype(object) + expected = Index(expected_list, dtype=object, name="idx") + tm.assert_index_equal(result, expected) + assert idx.tolist() == expected_list + + def test_astype(self): + # GH 13149, GH 13209 + idx = TimedeltaIndex([1e14, "NaT", NaT, np.nan], name="idx") + + result = idx.astype(object) + expected = Index( + [Timedelta("1 days 03:46:40")] + [NaT] * 3, dtype=object, name="idx" + ) + tm.assert_index_equal(result, expected) + + result = idx.astype(np.int64) + expected = Index( + [100000000000000] + [-9223372036854775808] * 3, dtype=np.int64, name="idx" + ) + tm.assert_index_equal(result, expected) + + result = idx.astype(str) + expected = Index([str(x) for x in idx], name="idx", dtype=object) + tm.assert_index_equal(result, expected) + + rng = timedelta_range("1 days", periods=10) + result = rng.astype("i8") + tm.assert_index_equal(result, Index(rng.asi8)) + tm.assert_numpy_array_equal(rng.asi8, result.values) + + def test_astype_uint(self): + arr = timedelta_range("1h", periods=2) + + with pytest.raises(TypeError, match=r"Do obj.astype\('int64'\)"): + arr.astype("uint64") + with pytest.raises(TypeError, match=r"Do obj.astype\('int64'\)"): + arr.astype("uint32") + + def test_astype_timedelta64(self): + # GH 13149, GH 13209 + idx = TimedeltaIndex([1e14, "NaT", NaT, np.nan]) + + msg = ( + r"Cannot convert from timedelta64\[ns\] to timedelta64. " + "Supported resolutions are 's', 'ms', 'us', 'ns'" + ) + with pytest.raises(ValueError, match=msg): + idx.astype("timedelta64") + + result = idx.astype("timedelta64[ns]") + tm.assert_index_equal(result, idx) + assert result is not idx + + result = idx.astype("timedelta64[ns]", copy=False) + tm.assert_index_equal(result, idx) + assert result is idx + + def test_astype_to_td64d_raises(self, index_or_series): + # We don't support "D" reso + scalar = Timedelta(days=31) + td = index_or_series( + [scalar, scalar, scalar + timedelta(minutes=5, seconds=3), NaT], + dtype="m8[ns]", + ) + msg = ( + r"Cannot convert from timedelta64\[ns\] to timedelta64\[D\]. " + "Supported resolutions are 's', 'ms', 'us', 'ns'" + ) + with pytest.raises(ValueError, match=msg): + td.astype("timedelta64[D]") + + def test_astype_ms_to_s(self, index_or_series): + scalar = Timedelta(days=31) + td = index_or_series( + [scalar, scalar, scalar + timedelta(minutes=5, seconds=3), NaT], + dtype="m8[ns]", + ) + + exp_values = np.asarray(td).astype("m8[s]") + exp_tda = TimedeltaArray._simple_new(exp_values, dtype=exp_values.dtype) + expected = index_or_series(exp_tda) + assert expected.dtype == "m8[s]" + result = td.astype("timedelta64[s]") + tm.assert_equal(result, expected) + + def test_astype_freq_conversion(self): + # pre-2.0 td64 astype converted to float64. now for supported units + # (s, ms, us, ns) this converts to the requested dtype. + # This matches TDA and Series + tdi = timedelta_range("1 Day", periods=30) + + res = tdi.astype("m8[s]") + exp_values = np.asarray(tdi).astype("m8[s]") + exp_tda = TimedeltaArray._simple_new( + exp_values, dtype=exp_values.dtype, freq=tdi.freq + ) + expected = Index(exp_tda) + assert expected.dtype == "m8[s]" + tm.assert_index_equal(res, expected) + + # check this matches Series and TimedeltaArray + res = tdi._data.astype("m8[s]") + tm.assert_equal(res, expected._values) + + res = tdi.to_series().astype("m8[s]") + tm.assert_equal(res._values, expected._values._with_freq(None)) + + @pytest.mark.parametrize("dtype", [float, "datetime64", "datetime64[ns]"]) + def test_astype_raises(self, dtype): + # GH 13149, GH 13209 + idx = TimedeltaIndex([1e14, "NaT", NaT, np.nan]) + msg = "Cannot cast TimedeltaIndex to dtype" + with pytest.raises(TypeError, match=msg): + idx.astype(dtype) + + def test_astype_category(self): + obj = timedelta_range("1h", periods=2, freq="h") + + result = obj.astype("category") + expected = pd.CategoricalIndex([Timedelta("1h"), Timedelta("2h")]) + tm.assert_index_equal(result, expected) + + result = obj._data.astype("category") + expected = expected.values + tm.assert_categorical_equal(result, expected) + + def test_astype_array_fallback(self): + obj = timedelta_range("1h", periods=2) + result = obj.astype(bool) + expected = Index(np.array([True, True])) + tm.assert_index_equal(result, expected) + + result = obj._data.astype(bool) + expected = np.array([True, True]) + tm.assert_numpy_array_equal(result, expected) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/methods/test_factorize.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/methods/test_factorize.py new file mode 100644 index 0000000000000000000000000000000000000000..24ab3888412d08b54543ed22910c67ce9bdf328f --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/methods/test_factorize.py @@ -0,0 +1,40 @@ +import numpy as np + +from pandas import ( + TimedeltaIndex, + factorize, + timedelta_range, +) +import pandas._testing as tm + + +class TestTimedeltaIndexFactorize: + def test_factorize(self): + idx1 = TimedeltaIndex(["1 day", "1 day", "2 day", "2 day", "3 day", "3 day"]) + + exp_arr = np.array([0, 0, 1, 1, 2, 2], dtype=np.intp) + exp_idx = TimedeltaIndex(["1 day", "2 day", "3 day"]) + + arr, idx = idx1.factorize() + tm.assert_numpy_array_equal(arr, exp_arr) + tm.assert_index_equal(idx, exp_idx) + assert idx.freq == exp_idx.freq + + arr, idx = idx1.factorize(sort=True) + tm.assert_numpy_array_equal(arr, exp_arr) + tm.assert_index_equal(idx, exp_idx) + assert idx.freq == exp_idx.freq + + def test_factorize_preserves_freq(self): + # GH#38120 freq should be preserved + idx3 = timedelta_range("1 day", periods=4, freq="s") + exp_arr = np.array([0, 1, 2, 3], dtype=np.intp) + arr, idx = idx3.factorize() + tm.assert_numpy_array_equal(arr, exp_arr) + tm.assert_index_equal(idx, idx3) + assert idx.freq == idx3.freq + + arr, idx = factorize(idx3) + tm.assert_numpy_array_equal(arr, exp_arr) + tm.assert_index_equal(idx, idx3) + assert idx.freq == idx3.freq diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/methods/test_repeat.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/methods/test_repeat.py new file mode 100644 index 0000000000000000000000000000000000000000..2a9b58d1bf322938e9344d0cbacfaa79674fcf0e --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/methods/test_repeat.py @@ -0,0 +1,34 @@ +import numpy as np + +from pandas import ( + TimedeltaIndex, + timedelta_range, +) +import pandas._testing as tm + + +class TestRepeat: + def test_repeat(self): + index = timedelta_range("1 days", periods=2, freq="D") + exp = TimedeltaIndex(["1 days", "1 days", "2 days", "2 days"]) + for res in [index.repeat(2), np.repeat(index, 2)]: + tm.assert_index_equal(res, exp) + assert res.freq is None + + index = TimedeltaIndex(["1 days", "NaT", "3 days"]) + exp = TimedeltaIndex( + [ + "1 days", + "1 days", + "1 days", + "NaT", + "NaT", + "NaT", + "3 days", + "3 days", + "3 days", + ] + ) + for res in [index.repeat(3), np.repeat(index, 3)]: + tm.assert_index_equal(res, exp) + assert res.freq is None diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_arithmetic.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_arithmetic.py new file mode 100644 index 0000000000000000000000000000000000000000..a431e10dc18ab15da0fd07f798d54b6dead26073 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_arithmetic.py @@ -0,0 +1,51 @@ +# Arithmetic tests for TimedeltaIndex are generally about the result's `freq` attribute. +# Other cases can be shared in tests.arithmetic.test_timedelta64 +import numpy as np + +from pandas import ( + NaT, + Timedelta, + timedelta_range, +) +import pandas._testing as tm + + +class TestTimedeltaIndexArithmetic: + def test_arithmetic_zero_freq(self): + # GH#51575 don't get a .freq with freq.n = 0 + tdi = timedelta_range(0, periods=100, freq="ns") + result = tdi / 2 + assert result.freq is None + expected = tdi[:50].repeat(2) + tm.assert_index_equal(result, expected) + + result2 = tdi // 2 + assert result2.freq is None + expected2 = expected + tm.assert_index_equal(result2, expected2) + + result3 = tdi * 0 + assert result3.freq is None + expected3 = tdi[:1].repeat(100) + tm.assert_index_equal(result3, expected3) + + def test_tdi_division(self, index_or_series): + # doc example + + scalar = Timedelta(days=31) + td = index_or_series( + [scalar, scalar, scalar + Timedelta(minutes=5, seconds=3), NaT], + dtype="m8[ns]", + ) + + result = td / np.timedelta64(1, "D") + expected = index_or_series( + [31, 31, (31 * 86400 + 5 * 60 + 3) / 86400.0, np.nan] + ) + tm.assert_equal(result, expected) + + result = td / np.timedelta64(1, "s") + expected = index_or_series( + [31 * 86400, 31 * 86400, 31 * 86400 + 5 * 60 + 3, np.nan] + ) + tm.assert_equal(result, expected) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_constructors.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_constructors.py new file mode 100644 index 0000000000000000000000000000000000000000..0510700bb64d7a626761a67d72ecfa6ecfba9ac4 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_constructors.py @@ -0,0 +1,291 @@ +from datetime import timedelta + +import numpy as np +import pytest + +import pandas as pd +from pandas import ( + Timedelta, + TimedeltaIndex, + timedelta_range, + to_timedelta, +) +import pandas._testing as tm +from pandas.core.arrays.timedeltas import TimedeltaArray + + +class TestTimedeltaIndex: + def test_closed_deprecated(self): + # GH#52628 + msg = "The 'closed' keyword" + with tm.assert_produces_warning(FutureWarning, match=msg): + TimedeltaIndex([], closed=True) + + def test_array_of_dt64_nat_raises(self): + # GH#39462 + nat = np.datetime64("NaT", "ns") + arr = np.array([nat], dtype=object) + + msg = "Invalid type for timedelta scalar" + with pytest.raises(TypeError, match=msg): + TimedeltaIndex(arr) + + with pytest.raises(TypeError, match=msg): + TimedeltaArray._from_sequence(arr, dtype="m8[ns]") + + with pytest.raises(TypeError, match=msg): + to_timedelta(arr) + + @pytest.mark.parametrize("unit", ["Y", "y", "M"]) + def test_unit_m_y_raises(self, unit): + msg = "Units 'M', 'Y', and 'y' are no longer supported" + depr_msg = "The 'unit' keyword in TimedeltaIndex construction is deprecated" + with pytest.raises(ValueError, match=msg): + with tm.assert_produces_warning(FutureWarning, match=depr_msg): + TimedeltaIndex([1, 3, 7], unit) + + def test_int64_nocopy(self): + # GH#23539 check that a copy isn't made when we pass int64 data + # and copy=False + arr = np.arange(10, dtype=np.int64) + tdi = TimedeltaIndex(arr, copy=False) + assert tdi._data._ndarray.base is arr + + def test_infer_from_tdi(self): + # GH#23539 + # fast-path for inferring a frequency if the passed data already + # has one + tdi = timedelta_range("1 second", periods=10**7, freq="1s") + + result = TimedeltaIndex(tdi, freq="infer") + assert result.freq == tdi.freq + + # check that inferred_freq was not called by checking that the + # value has not been cached + assert "inferred_freq" not in getattr(result, "_cache", {}) + + def test_infer_from_tdi_mismatch(self): + # GH#23539 + # fast-path for invalidating a frequency if the passed data already + # has one and it does not match the `freq` input + tdi = timedelta_range("1 second", periods=100, freq="1s") + + depr_msg = "TimedeltaArray.__init__ is deprecated" + msg = ( + "Inferred frequency .* from passed values does " + "not conform to passed frequency" + ) + with pytest.raises(ValueError, match=msg): + TimedeltaIndex(tdi, freq="D") + + with pytest.raises(ValueError, match=msg): + # GH#23789 + with tm.assert_produces_warning(FutureWarning, match=depr_msg): + TimedeltaArray(tdi, freq="D") + + with pytest.raises(ValueError, match=msg): + TimedeltaIndex(tdi._data, freq="D") + + with pytest.raises(ValueError, match=msg): + with tm.assert_produces_warning(FutureWarning, match=depr_msg): + TimedeltaArray(tdi._data, freq="D") + + def test_dt64_data_invalid(self): + # GH#23539 + # passing tz-aware DatetimeIndex raises, naive or ndarray[datetime64] + # raise as of GH#29794 + dti = pd.date_range("2016-01-01", periods=3) + + msg = "cannot be converted to timedelta64" + with pytest.raises(TypeError, match=msg): + TimedeltaIndex(dti.tz_localize("Europe/Brussels")) + + with pytest.raises(TypeError, match=msg): + TimedeltaIndex(dti) + + with pytest.raises(TypeError, match=msg): + TimedeltaIndex(np.asarray(dti)) + + def test_float64_ns_rounded(self): + # GH#23539 without specifying a unit, floats are regarded as nanos, + # and fractional portions are truncated + tdi = TimedeltaIndex([2.3, 9.7]) + expected = TimedeltaIndex([2, 9]) + tm.assert_index_equal(tdi, expected) + + # integral floats are non-lossy + tdi = TimedeltaIndex([2.0, 9.0]) + expected = TimedeltaIndex([2, 9]) + tm.assert_index_equal(tdi, expected) + + # NaNs get converted to NaT + tdi = TimedeltaIndex([2.0, np.nan]) + expected = TimedeltaIndex([Timedelta(nanoseconds=2), pd.NaT]) + tm.assert_index_equal(tdi, expected) + + def test_float64_unit_conversion(self): + # GH#23539 + tdi = to_timedelta([1.5, 2.25], unit="D") + expected = TimedeltaIndex([Timedelta(days=1.5), Timedelta(days=2.25)]) + tm.assert_index_equal(tdi, expected) + + def test_construction_base_constructor(self): + arr = [Timedelta("1 days"), pd.NaT, Timedelta("3 days")] + tm.assert_index_equal(pd.Index(arr), TimedeltaIndex(arr)) + tm.assert_index_equal(pd.Index(np.array(arr)), TimedeltaIndex(np.array(arr))) + + arr = [np.nan, pd.NaT, Timedelta("1 days")] + tm.assert_index_equal(pd.Index(arr), TimedeltaIndex(arr)) + tm.assert_index_equal(pd.Index(np.array(arr)), TimedeltaIndex(np.array(arr))) + + @pytest.mark.filterwarnings( + "ignore:The 'unit' keyword in TimedeltaIndex construction:FutureWarning" + ) + def test_constructor(self): + expected = TimedeltaIndex( + [ + "1 days", + "1 days 00:00:05", + "2 days", + "2 days 00:00:02", + "0 days 00:00:03", + ] + ) + result = TimedeltaIndex( + [ + "1 days", + "1 days, 00:00:05", + np.timedelta64(2, "D"), + timedelta(days=2, seconds=2), + pd.offsets.Second(3), + ] + ) + tm.assert_index_equal(result, expected) + + expected = TimedeltaIndex( + ["0 days 00:00:00", "0 days 00:00:01", "0 days 00:00:02"] + ) + result = TimedeltaIndex(range(3), unit="s") + tm.assert_index_equal(result, expected) + expected = TimedeltaIndex( + ["0 days 00:00:00", "0 days 00:00:05", "0 days 00:00:09"] + ) + result = TimedeltaIndex([0, 5, 9], unit="s") + tm.assert_index_equal(result, expected) + expected = TimedeltaIndex( + ["0 days 00:00:00.400", "0 days 00:00:00.450", "0 days 00:00:01.200"] + ) + result = TimedeltaIndex([400, 450, 1200], unit="ms") + tm.assert_index_equal(result, expected) + + def test_constructor_iso(self): + # GH #21877 + expected = timedelta_range("1s", periods=9, freq="s") + durations = [f"P0DT0H0M{i}S" for i in range(1, 10)] + result = to_timedelta(durations) + tm.assert_index_equal(result, expected) + + def test_timedelta_range_fractional_period(self): + msg = "Non-integer 'periods' in pd.date_range, pd.timedelta_range" + with tm.assert_produces_warning(FutureWarning, match=msg): + rng = timedelta_range("1 days", periods=10.5) + exp = timedelta_range("1 days", periods=10) + tm.assert_index_equal(rng, exp) + + def test_constructor_coverage(self): + msg = "periods must be a number, got foo" + with pytest.raises(TypeError, match=msg): + timedelta_range(start="1 days", periods="foo", freq="D") + + msg = ( + r"TimedeltaIndex\(\.\.\.\) must be called with a collection of some kind, " + "'1 days' was passed" + ) + with pytest.raises(TypeError, match=msg): + TimedeltaIndex("1 days") + + # generator expression + gen = (timedelta(i) for i in range(10)) + result = TimedeltaIndex(gen) + expected = TimedeltaIndex([timedelta(i) for i in range(10)]) + tm.assert_index_equal(result, expected) + + # NumPy string array + strings = np.array(["1 days", "2 days", "3 days"]) + result = TimedeltaIndex(strings) + expected = to_timedelta([1, 2, 3], unit="d") + tm.assert_index_equal(result, expected) + + from_ints = TimedeltaIndex(expected.asi8) + tm.assert_index_equal(from_ints, expected) + + # non-conforming freq + msg = ( + "Inferred frequency None from passed values does not conform to " + "passed frequency D" + ) + with pytest.raises(ValueError, match=msg): + TimedeltaIndex(["1 days", "2 days", "4 days"], freq="D") + + msg = ( + "Of the four parameters: start, end, periods, and freq, exactly " + "three must be specified" + ) + with pytest.raises(ValueError, match=msg): + timedelta_range(periods=10, freq="D") + + def test_constructor_name(self): + idx = timedelta_range(start="1 days", periods=1, freq="D", name="TEST") + assert idx.name == "TEST" + + # GH10025 + idx2 = TimedeltaIndex(idx, name="something else") + assert idx2.name == "something else" + + def test_constructor_no_precision_raises(self): + # GH-24753, GH-24739 + + msg = "with no precision is not allowed" + with pytest.raises(ValueError, match=msg): + TimedeltaIndex(["2000"], dtype="timedelta64") + + msg = "The 'timedelta64' dtype has no unit. Please pass in" + with pytest.raises(ValueError, match=msg): + pd.Index(["2000"], dtype="timedelta64") + + def test_constructor_wrong_precision_raises(self): + msg = "Supported timedelta64 resolutions are 's', 'ms', 'us', 'ns'" + with pytest.raises(ValueError, match=msg): + TimedeltaIndex(["2000"], dtype="timedelta64[D]") + + # "timedelta64[us]" was unsupported pre-2.0, but now this works. + tdi = TimedeltaIndex(["2000"], dtype="timedelta64[us]") + assert tdi.dtype == "m8[us]" + + def test_explicit_none_freq(self): + # Explicitly passing freq=None is respected + tdi = timedelta_range(1, periods=5) + assert tdi.freq is not None + + result = TimedeltaIndex(tdi, freq=None) + assert result.freq is None + + result = TimedeltaIndex(tdi._data, freq=None) + assert result.freq is None + + msg = "TimedeltaArray.__init__ is deprecated" + with tm.assert_produces_warning(FutureWarning, match=msg): + tda = TimedeltaArray(tdi, freq=None) + assert tda.freq is None + + def test_from_categorical(self): + tdi = timedelta_range(1, periods=5) + + cat = pd.Categorical(tdi) + + result = TimedeltaIndex(cat) + tm.assert_index_equal(result, tdi) + + ci = pd.CategoricalIndex(tdi) + result = TimedeltaIndex(ci) + tm.assert_index_equal(result, tdi) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_delete.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_delete.py new file mode 100644 index 0000000000000000000000000000000000000000..6e6f54702ce1a09c0fccb0c44d0cd4a474c46a8c --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_delete.py @@ -0,0 +1,71 @@ +from pandas import ( + TimedeltaIndex, + timedelta_range, +) +import pandas._testing as tm + + +class TestTimedeltaIndexDelete: + def test_delete(self): + idx = timedelta_range(start="1 Days", periods=5, freq="D", name="idx") + + # preserve freq + expected_0 = timedelta_range(start="2 Days", periods=4, freq="D", name="idx") + expected_4 = timedelta_range(start="1 Days", periods=4, freq="D", name="idx") + + # reset freq to None + expected_1 = TimedeltaIndex( + ["1 day", "3 day", "4 day", "5 day"], freq=None, name="idx" + ) + + cases = { + 0: expected_0, + -5: expected_0, + -1: expected_4, + 4: expected_4, + 1: expected_1, + } + for n, expected in cases.items(): + result = idx.delete(n) + tm.assert_index_equal(result, expected) + assert result.name == expected.name + assert result.freq == expected.freq + + with tm.external_error_raised((IndexError, ValueError)): + # either depending on numpy version + idx.delete(5) + + def test_delete_slice(self): + idx = timedelta_range(start="1 days", periods=10, freq="D", name="idx") + + # preserve freq + expected_0_2 = timedelta_range(start="4 days", periods=7, freq="D", name="idx") + expected_7_9 = timedelta_range(start="1 days", periods=7, freq="D", name="idx") + + # reset freq to None + expected_3_5 = TimedeltaIndex( + ["1 d", "2 d", "3 d", "7 d", "8 d", "9 d", "10d"], freq=None, name="idx" + ) + + cases = { + (0, 1, 2): expected_0_2, + (7, 8, 9): expected_7_9, + (3, 4, 5): expected_3_5, + } + for n, expected in cases.items(): + result = idx.delete(n) + tm.assert_index_equal(result, expected) + assert result.name == expected.name + assert result.freq == expected.freq + + result = idx.delete(slice(n[0], n[-1] + 1)) + tm.assert_index_equal(result, expected) + assert result.name == expected.name + assert result.freq == expected.freq + + def test_delete_doesnt_infer_freq(self): + # GH#30655 behavior matches DatetimeIndex + + tdi = TimedeltaIndex(["1 Day", "2 Days", None, "3 Days", "4 Days"]) + result = tdi.delete(2) + assert result.freq is None diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_formats.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_formats.py new file mode 100644 index 0000000000000000000000000000000000000000..607336060cbbc2093e224e31614e26a2c03bd72f --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_formats.py @@ -0,0 +1,106 @@ +import pytest + +import pandas as pd +from pandas import ( + Series, + TimedeltaIndex, +) + + +class TestTimedeltaIndexRendering: + def test_repr_round_days_non_nano(self): + # GH#55405 + # we should get "1 days", not "1 days 00:00:00" with non-nano + tdi = TimedeltaIndex(["1 days"], freq="D").as_unit("s") + result = repr(tdi) + expected = "TimedeltaIndex(['1 days'], dtype='timedelta64[s]', freq='D')" + assert result == expected + + result2 = repr(Series(tdi)) + expected2 = "0 1 days\ndtype: timedelta64[s]" + assert result2 == expected2 + + @pytest.mark.parametrize("method", ["__repr__", "__str__"]) + def test_representation(self, method): + idx1 = TimedeltaIndex([], freq="D") + idx2 = TimedeltaIndex(["1 days"], freq="D") + idx3 = TimedeltaIndex(["1 days", "2 days"], freq="D") + idx4 = TimedeltaIndex(["1 days", "2 days", "3 days"], freq="D") + idx5 = TimedeltaIndex(["1 days 00:00:01", "2 days", "3 days"]) + + exp1 = "TimedeltaIndex([], dtype='timedelta64[ns]', freq='D')" + + exp2 = "TimedeltaIndex(['1 days'], dtype='timedelta64[ns]', freq='D')" + + exp3 = "TimedeltaIndex(['1 days', '2 days'], dtype='timedelta64[ns]', freq='D')" + + exp4 = ( + "TimedeltaIndex(['1 days', '2 days', '3 days'], " + "dtype='timedelta64[ns]', freq='D')" + ) + + exp5 = ( + "TimedeltaIndex(['1 days 00:00:01', '2 days 00:00:00', " + "'3 days 00:00:00'], dtype='timedelta64[ns]', freq=None)" + ) + + with pd.option_context("display.width", 300): + for idx, expected in zip( + [idx1, idx2, idx3, idx4, idx5], [exp1, exp2, exp3, exp4, exp5] + ): + result = getattr(idx, method)() + assert result == expected + + # TODO: this is a Series.__repr__ test + def test_representation_to_series(self): + idx1 = TimedeltaIndex([], freq="D") + idx2 = TimedeltaIndex(["1 days"], freq="D") + idx3 = TimedeltaIndex(["1 days", "2 days"], freq="D") + idx4 = TimedeltaIndex(["1 days", "2 days", "3 days"], freq="D") + idx5 = TimedeltaIndex(["1 days 00:00:01", "2 days", "3 days"]) + + exp1 = """Series([], dtype: timedelta64[ns])""" + + exp2 = "0 1 days\ndtype: timedelta64[ns]" + + exp3 = "0 1 days\n1 2 days\ndtype: timedelta64[ns]" + + exp4 = "0 1 days\n1 2 days\n2 3 days\ndtype: timedelta64[ns]" + + exp5 = ( + "0 1 days 00:00:01\n" + "1 2 days 00:00:00\n" + "2 3 days 00:00:00\n" + "dtype: timedelta64[ns]" + ) + + with pd.option_context("display.width", 300): + for idx, expected in zip( + [idx1, idx2, idx3, idx4, idx5], [exp1, exp2, exp3, exp4, exp5] + ): + result = repr(Series(idx)) + assert result == expected + + def test_summary(self): + # GH#9116 + idx1 = TimedeltaIndex([], freq="D") + idx2 = TimedeltaIndex(["1 days"], freq="D") + idx3 = TimedeltaIndex(["1 days", "2 days"], freq="D") + idx4 = TimedeltaIndex(["1 days", "2 days", "3 days"], freq="D") + idx5 = TimedeltaIndex(["1 days 00:00:01", "2 days", "3 days"]) + + exp1 = "TimedeltaIndex: 0 entries\nFreq: D" + + exp2 = "TimedeltaIndex: 1 entries, 1 days to 1 days\nFreq: D" + + exp3 = "TimedeltaIndex: 2 entries, 1 days to 2 days\nFreq: D" + + exp4 = "TimedeltaIndex: 3 entries, 1 days to 3 days\nFreq: D" + + exp5 = "TimedeltaIndex: 3 entries, 1 days 00:00:01 to 3 days 00:00:00" + + for idx, expected in zip( + [idx1, idx2, idx3, idx4, idx5], [exp1, exp2, exp3, exp4, exp5] + ): + result = idx._summary() + assert result == expected diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_freq_attr.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_freq_attr.py new file mode 100644 index 0000000000000000000000000000000000000000..1912c49d3000fcbef45dd081213778bfb387e38e --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_freq_attr.py @@ -0,0 +1,72 @@ +import pytest + +from pandas import TimedeltaIndex + +from pandas.tseries.offsets import ( + DateOffset, + Day, + Hour, + MonthEnd, +) + + +class TestFreq: + @pytest.mark.parametrize("values", [["0 days", "2 days", "4 days"], []]) + @pytest.mark.parametrize("freq", ["2D", Day(2), "48h", Hour(48)]) + def test_freq_setter(self, values, freq): + # GH#20678 + idx = TimedeltaIndex(values) + + # can set to an offset, converting from string if necessary + idx._data.freq = freq + assert idx.freq == freq + assert isinstance(idx.freq, DateOffset) + + # can reset to None + idx._data.freq = None + assert idx.freq is None + + def test_with_freq_empty_requires_tick(self): + idx = TimedeltaIndex([]) + + off = MonthEnd(1) + msg = "TimedeltaArray/Index freq must be a Tick" + with pytest.raises(TypeError, match=msg): + idx._with_freq(off) + with pytest.raises(TypeError, match=msg): + idx._data._with_freq(off) + + def test_freq_setter_errors(self): + # GH#20678 + idx = TimedeltaIndex(["0 days", "2 days", "4 days"]) + + # setting with an incompatible freq + msg = ( + "Inferred frequency 2D from passed values does not conform to " + "passed frequency 5D" + ) + with pytest.raises(ValueError, match=msg): + idx._data.freq = "5D" + + # setting with a non-fixed frequency + msg = r"<2 \* BusinessDays> is a non-fixed frequency" + with pytest.raises(ValueError, match=msg): + idx._data.freq = "2B" + + # setting with non-freq string + with pytest.raises(ValueError, match="Invalid frequency"): + idx._data.freq = "foo" + + def test_freq_view_safe(self): + # Setting the freq for one TimedeltaIndex shouldn't alter the freq + # for another that views the same data + + tdi = TimedeltaIndex(["0 days", "2 days", "4 days"], freq="2D") + tda = tdi._data + + tdi2 = TimedeltaIndex(tda)._with_freq(None) + assert tdi2.freq is None + + # Original was not altered + assert tdi.freq == "2D" + assert tda.freq == "2D" diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_indexing.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_indexing.py new file mode 100644 index 0000000000000000000000000000000000000000..397f9d9e183319f6df9335fbae7f8cb7401d6ac1 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_indexing.py @@ -0,0 +1,347 @@ +from datetime import datetime +import re + +import numpy as np +import pytest + +from pandas import ( + Index, + NaT, + Timedelta, + TimedeltaIndex, + Timestamp, + notna, + offsets, + timedelta_range, + to_timedelta, +) +import pandas._testing as tm + + +class TestGetItem: + def test_getitem_slice_keeps_name(self): + # GH#4226 + tdi = timedelta_range("1d", "5d", freq="h", name="timebucket") + assert tdi[1:].name == tdi.name + + def test_getitem(self): + idx1 = timedelta_range("1 day", "31 day", freq="D", name="idx") + + for idx in [idx1]: + result = idx[0] + assert result == Timedelta("1 day") + + result = idx[0:5] + expected = timedelta_range("1 day", "5 day", freq="D", name="idx") + tm.assert_index_equal(result, expected) + assert result.freq == expected.freq + + result = idx[0:10:2] + expected = timedelta_range("1 day", "9 day", freq="2D", name="idx") + tm.assert_index_equal(result, expected) + assert result.freq == expected.freq + + result = idx[-20:-5:3] + expected = timedelta_range("12 day", "24 day", freq="3D", name="idx") + tm.assert_index_equal(result, expected) + assert result.freq == expected.freq + + result = idx[4::-1] + expected = TimedeltaIndex( + ["5 day", "4 day", "3 day", "2 day", "1 day"], freq="-1D", name="idx" + ) + tm.assert_index_equal(result, expected) + assert result.freq == expected.freq + + @pytest.mark.parametrize( + "key", + [ + Timestamp("1970-01-01"), + Timestamp("1970-01-02"), + datetime(1970, 1, 1), + Timestamp("1970-01-03").to_datetime64(), + # non-matching NA values + np.datetime64("NaT"), + ], + ) + def test_timestamp_invalid_key(self, key): + # GH#20464 + tdi = timedelta_range(0, periods=10) + with pytest.raises(KeyError, match=re.escape(repr(key))): + tdi.get_loc(key) + + +class TestGetLoc: + def test_get_loc_key_unit_mismatch(self): + idx = to_timedelta(["0 days", "1 days", "2 days"]) + key = idx[1].as_unit("ms") + loc = idx.get_loc(key) + assert loc == 1 + + def test_get_loc_key_unit_mismatch_not_castable(self): + tdi = to_timedelta(["0 days", "1 days", "2 days"]).astype("m8[s]") + assert tdi.dtype == "m8[s]" + key = tdi[0].as_unit("ns") + Timedelta(1) + + with pytest.raises(KeyError, match=r"Timedelta\('0 days 00:00:00.000000001'\)"): + tdi.get_loc(key) + + assert key not in tdi + + def test_get_loc(self): + idx = to_timedelta(["0 days", "1 days", "2 days"]) + + # GH 16909 + assert idx.get_loc(idx[1].to_timedelta64()) == 1 + + # GH 16896 + assert idx.get_loc("0 days") == 0 + + def test_get_loc_nat(self): + tidx = TimedeltaIndex(["1 days 01:00:00", "NaT", "2 days 01:00:00"]) + + assert tidx.get_loc(NaT) == 1 + assert tidx.get_loc(None) == 1 + assert tidx.get_loc(float("nan")) == 1 + assert tidx.get_loc(np.nan) == 1 + + +class TestGetIndexer: + def test_get_indexer(self): + idx = to_timedelta(["0 days", "1 days", "2 days"]) + tm.assert_numpy_array_equal( + idx.get_indexer(idx), np.array([0, 1, 2], dtype=np.intp) + ) + + target = to_timedelta(["-1 hour", "12 hours", "1 day 1 hour"]) + tm.assert_numpy_array_equal( + idx.get_indexer(target, "pad"), np.array([-1, 0, 1], dtype=np.intp) + ) + tm.assert_numpy_array_equal( + idx.get_indexer(target, "backfill"), np.array([0, 1, 2], dtype=np.intp) + ) + tm.assert_numpy_array_equal( + idx.get_indexer(target, "nearest"), np.array([0, 1, 1], dtype=np.intp) + ) + + res = idx.get_indexer(target, "nearest", tolerance=Timedelta("1 hour")) + tm.assert_numpy_array_equal(res, np.array([0, -1, 1], dtype=np.intp)) + + +class TestWhere: + def test_where_doesnt_retain_freq(self): + tdi = timedelta_range("1 day", periods=3, freq="D", name="idx") + cond = [True, True, False] + expected = TimedeltaIndex([tdi[0], tdi[1], tdi[0]], freq=None, name="idx") + + result = tdi.where(cond, tdi[::-1]) + tm.assert_index_equal(result, expected) + + def test_where_invalid_dtypes(self, fixed_now_ts): + tdi = timedelta_range("1 day", periods=3, freq="D", name="idx") + + tail = tdi[2:].tolist() + i2 = Index([NaT, NaT] + tail) + mask = notna(i2) + + expected = Index([NaT._value, NaT._value] + tail, dtype=object, name="idx") + assert isinstance(expected[0], int) + result = tdi.where(mask, i2.asi8) + tm.assert_index_equal(result, expected) + + ts = i2 + fixed_now_ts + expected = Index([ts[0], ts[1]] + tail, dtype=object, name="idx") + result = tdi.where(mask, ts) + tm.assert_index_equal(result, expected) + + per = (i2 + fixed_now_ts).to_period("D") + expected = Index([per[0], per[1]] + tail, dtype=object, name="idx") + result = tdi.where(mask, per) + tm.assert_index_equal(result, expected) + + ts = fixed_now_ts + expected = Index([ts, ts] + tail, dtype=object, name="idx") + result = tdi.where(mask, ts) + tm.assert_index_equal(result, expected) + + def test_where_mismatched_nat(self): + tdi = timedelta_range("1 day", periods=3, freq="D", name="idx") + cond = np.array([True, False, False]) + + dtnat = np.datetime64("NaT", "ns") + expected = Index([tdi[0], dtnat, dtnat], dtype=object, name="idx") + assert expected[2] is dtnat + result = tdi.where(cond, dtnat) + tm.assert_index_equal(result, expected) + + +class TestTake: + def test_take(self): + # GH 10295 + idx1 = timedelta_range("1 day", "31 day", freq="D", name="idx") + + for idx in [idx1]: + result = idx.take([0]) + assert result == Timedelta("1 day") + + result = idx.take([-1]) + assert result == Timedelta("31 day") + + result = idx.take([0, 1, 2]) + expected = timedelta_range("1 day", "3 day", freq="D", name="idx") + tm.assert_index_equal(result, expected) + assert result.freq == expected.freq + + result = idx.take([0, 2, 4]) + expected = timedelta_range("1 day", "5 day", freq="2D", name="idx") + tm.assert_index_equal(result, expected) + assert result.freq == expected.freq + + result = idx.take([7, 4, 1]) + expected = timedelta_range("8 day", "2 day", freq="-3D", name="idx") + tm.assert_index_equal(result, expected) + assert result.freq == expected.freq + + result = idx.take([3, 2, 5]) + expected = TimedeltaIndex(["4 day", "3 day", "6 day"], name="idx") + tm.assert_index_equal(result, expected) + assert result.freq is None + + result = idx.take([-3, 2, 5]) + expected = TimedeltaIndex(["29 day", "3 day", "6 day"], name="idx") + tm.assert_index_equal(result, expected) + assert result.freq is None + + def test_take_invalid_kwargs(self): + idx = timedelta_range("1 day", "31 day", freq="D", name="idx") + indices = [1, 6, 5, 9, 10, 13, 15, 3] + + msg = r"take\(\) got an unexpected keyword argument 'foo'" + with pytest.raises(TypeError, match=msg): + idx.take(indices, foo=2) + + msg = "the 'out' parameter is not supported" + with pytest.raises(ValueError, match=msg): + idx.take(indices, out=indices) + + msg = "the 'mode' parameter is not supported" + with pytest.raises(ValueError, match=msg): + idx.take(indices, mode="clip") + + def test_take_equiv_getitem(self): + tds = ["1day 02:00:00", "1 day 04:00:00", "1 day 10:00:00"] + idx = timedelta_range(start="1d", end="2d", freq="h", name="idx") + expected = TimedeltaIndex(tds, freq=None, name="idx") + + taken1 = idx.take([2, 4, 10]) + taken2 = idx[[2, 4, 10]] + + for taken in [taken1, taken2]: + tm.assert_index_equal(taken, expected) + assert isinstance(taken, TimedeltaIndex) + assert taken.freq is None + assert taken.name == expected.name + + def test_take_fill_value(self): + # GH 12631 + idx = TimedeltaIndex(["1 days", "2 days", "3 days"], name="xxx") + result = idx.take(np.array([1, 0, -1])) + expected = TimedeltaIndex(["2 days", "1 days", "3 days"], name="xxx") + tm.assert_index_equal(result, expected) + + # fill_value + result = idx.take(np.array([1, 0, -1]), fill_value=True) + expected = TimedeltaIndex(["2 days", "1 days", "NaT"], name="xxx") + tm.assert_index_equal(result, expected) + + # allow_fill=False + result = idx.take(np.array([1, 0, -1]), allow_fill=False, fill_value=True) + expected = TimedeltaIndex(["2 days", "1 days", "3 days"], name="xxx") + tm.assert_index_equal(result, expected) + + msg = ( + "When allow_fill=True and fill_value is not None, " + "all indices must be >= -1" + ) + with pytest.raises(ValueError, match=msg): + idx.take(np.array([1, 0, -2]), fill_value=True) + with pytest.raises(ValueError, match=msg): + idx.take(np.array([1, 0, -5]), fill_value=True) + + msg = "index -5 is out of bounds for (axis 0 with )?size 3" + with pytest.raises(IndexError, match=msg): + idx.take(np.array([1, -5])) + + +class TestMaybeCastSliceBound: + @pytest.fixture(params=["increasing", "decreasing", None]) + def monotonic(self, request): + return request.param + + @pytest.fixture + def tdi(self, monotonic): + tdi = timedelta_range("1 Day", periods=10) + if monotonic == "decreasing": + tdi = tdi[::-1] + elif monotonic is None: + taker = np.arange(10, dtype=np.intp) + np.random.default_rng(2).shuffle(taker) + tdi = tdi.take(taker) + return tdi + + def test_maybe_cast_slice_bound_invalid_str(self, tdi): + # test the low-level _maybe_cast_slice_bound and that we get the + # expected exception+message all the way up the stack + msg = ( + "cannot do slice indexing on TimedeltaIndex with these " + r"indexers \[foo\] of type str" + ) + with pytest.raises(TypeError, match=msg): + tdi._maybe_cast_slice_bound("foo", side="left") + with pytest.raises(TypeError, match=msg): + tdi.get_slice_bound("foo", side="left") + with pytest.raises(TypeError, match=msg): + tdi.slice_locs("foo", None, None) + + def test_slice_invalid_str_with_timedeltaindex( + self, tdi, frame_or_series, indexer_sl + ): + obj = frame_or_series(range(10), index=tdi) + + msg = ( + "cannot do slice indexing on TimedeltaIndex with these " + r"indexers \[foo\] of type str" + ) + with pytest.raises(TypeError, match=msg): + indexer_sl(obj)["foo":] + with pytest.raises(TypeError, match=msg): + indexer_sl(obj)["foo":-1] + with pytest.raises(TypeError, match=msg): + indexer_sl(obj)[:"foo"] + with pytest.raises(TypeError, match=msg): + indexer_sl(obj)[tdi[0] : "foo"] + + +class TestContains: + def test_contains_nonunique(self): + # GH#9512 + for vals in ( + [0, 1, 0], + [0, 0, -1], + [0, -1, -1], + ["00:01:00", "00:01:00", "00:02:00"], + ["00:01:00", "00:01:00", "00:00:01"], + ): + idx = TimedeltaIndex(vals) + assert idx[0] in idx + + def test_contains(self): + # Checking for any NaT-like objects + # GH#13603 + td = to_timedelta(range(5), unit="d") + offsets.Hour(1) + for v in [NaT, None, float("nan"), np.nan]: + assert v not in td + + td = to_timedelta([NaT]) + for v in [NaT, None, float("nan"), np.nan]: + assert v in td diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_join.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_join.py new file mode 100644 index 0000000000000000000000000000000000000000..cbd7a5de71b10a6004cd7a3f798fecd8e7631750 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_join.py @@ -0,0 +1,47 @@ +import numpy as np + +from pandas import ( + DataFrame, + Index, + Timedelta, + timedelta_range, +) +import pandas._testing as tm + + +class TestJoin: + def test_append_join_nondatetimeindex(self): + rng = timedelta_range("1 days", periods=10) + idx = Index(["a", "b", "c", "d"]) + + result = rng.append(idx) + assert isinstance(result[0], Timedelta) + + # it works + rng.join(idx, how="outer") + + def test_join_self(self, join_type): + index = timedelta_range("1 day", periods=10) + joined = index.join(index, how=join_type) + tm.assert_index_equal(index, joined) + + def test_does_not_convert_mixed_integer(self): + df = DataFrame(np.ones((5, 5)), columns=timedelta_range("1 day", periods=5)) + + cols = df.columns.join(df.index, how="outer") + joined = cols.join(df.columns) + assert cols.dtype == np.dtype("O") + assert cols.dtype == joined.dtype + tm.assert_index_equal(cols, joined) + + def test_join_preserves_freq(self): + # GH#32157 + tdi = timedelta_range("1 day", periods=10) + result = tdi[:5].join(tdi[5:], how="outer") + assert result.freq == tdi.freq + tm.assert_index_equal(result, tdi) + + result = tdi[:5].join(tdi[6:], how="outer") + assert result.freq is None + expected = tdi.delete(5) + tm.assert_index_equal(result, expected) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_ops.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_ops.py new file mode 100644 index 0000000000000000000000000000000000000000..f6013baf86edcd566a17cd3127467a7443ac475a --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_ops.py @@ -0,0 +1,14 @@ +from pandas import ( + TimedeltaIndex, + timedelta_range, +) +import pandas._testing as tm + + +class TestTimedeltaIndexOps: + def test_infer_freq(self, freq_sample): + # GH#11018 + idx = timedelta_range("1", freq=freq_sample, periods=10) + result = TimedeltaIndex(idx.asi8, freq="infer") + tm.assert_index_equal(idx, result) + assert result.freq == freq_sample diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_pickle.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_pickle.py new file mode 100644 index 0000000000000000000000000000000000000000..befe709728bdd4e9fac3c626f4e33986d671c86d --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_pickle.py @@ -0,0 +1,11 @@ +from pandas import timedelta_range +import pandas._testing as tm + + +class TestPickle: + def test_pickle_after_set_freq(self): + tdi = timedelta_range("1 day", periods=4, freq="s") + tdi = tdi._with_freq(None) + + res = tm.round_trip_pickle(tdi) + tm.assert_index_equal(res, tdi) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_scalar_compat.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_scalar_compat.py new file mode 100644 index 0000000000000000000000000000000000000000..9f0552f8baa901addaae9b4ca0890f6edb272715 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_scalar_compat.py @@ -0,0 +1,142 @@ +""" +Tests for TimedeltaIndex methods behaving like their Timedelta counterparts +""" + +import numpy as np +import pytest + +from pandas._libs.tslibs.offsets import INVALID_FREQ_ERR_MSG + +from pandas import ( + Index, + Series, + Timedelta, + TimedeltaIndex, + timedelta_range, +) +import pandas._testing as tm + + +class TestVectorizedTimedelta: + def test_tdi_total_seconds(self): + # GH#10939 + # test index + rng = timedelta_range("1 days, 10:11:12.100123456", periods=2, freq="s") + expt = [ + 1 * 86400 + 10 * 3600 + 11 * 60 + 12 + 100123456.0 / 1e9, + 1 * 86400 + 10 * 3600 + 11 * 60 + 13 + 100123456.0 / 1e9, + ] + tm.assert_almost_equal(rng.total_seconds(), Index(expt)) + + # test Series + ser = Series(rng) + s_expt = Series(expt, index=[0, 1]) + tm.assert_series_equal(ser.dt.total_seconds(), s_expt) + + # with nat + ser[1] = np.nan + s_expt = Series( + [1 * 86400 + 10 * 3600 + 11 * 60 + 12 + 100123456.0 / 1e9, np.nan], + index=[0, 1], + ) + tm.assert_series_equal(ser.dt.total_seconds(), s_expt) + + def test_tdi_total_seconds_all_nat(self): + # with both nat + ser = Series([np.nan, np.nan], dtype="timedelta64[ns]") + result = ser.dt.total_seconds() + expected = Series([np.nan, np.nan]) + tm.assert_series_equal(result, expected) + + def test_tdi_round(self): + td = timedelta_range(start="16801 days", periods=5, freq="30Min") + elt = td[1] + + expected_rng = TimedeltaIndex( + [ + Timedelta("16801 days 00:00:00"), + Timedelta("16801 days 00:00:00"), + Timedelta("16801 days 01:00:00"), + Timedelta("16801 days 02:00:00"), + Timedelta("16801 days 02:00:00"), + ] + ) + expected_elt = expected_rng[1] + + tm.assert_index_equal(td.round(freq="h"), expected_rng) + assert elt.round(freq="h") == expected_elt + + msg = INVALID_FREQ_ERR_MSG + with pytest.raises(ValueError, match=msg): + td.round(freq="foo") + with pytest.raises(ValueError, match=msg): + elt.round(freq="foo") + + msg = " is a non-fixed frequency" + with pytest.raises(ValueError, match=msg): + td.round(freq="ME") + with pytest.raises(ValueError, match=msg): + elt.round(freq="ME") + + @pytest.mark.parametrize( + "freq,msg", + [ + ("YE", " is a non-fixed frequency"), + ("ME", " is a non-fixed frequency"), + ("foobar", "Invalid frequency: foobar"), + ], + ) + def test_tdi_round_invalid(self, freq, msg): + t1 = timedelta_range("1 days", periods=3, freq="1 min 2 s 3 us") + + with pytest.raises(ValueError, match=msg): + t1.round(freq) + with pytest.raises(ValueError, match=msg): + # Same test for TimedeltaArray + t1._data.round(freq) + + # TODO: de-duplicate with test_tdi_round + def test_round(self): + t1 = timedelta_range("1 days", periods=3, freq="1 min 2 s 3 us") + t2 = -1 * t1 + t1a = timedelta_range("1 days", periods=3, freq="1 min 2 s") + t1c = TimedeltaIndex(np.array([1, 1, 1], "m8[D]")).as_unit("ns") + + # note that negative times round DOWN! so don't give whole numbers + for freq, s1, s2 in [ + ("ns", t1, t2), + ("us", t1, t2), + ( + "ms", + t1a, + TimedeltaIndex( + ["-1 days +00:00:00", "-2 days +23:58:58", "-2 days +23:57:56"] + ), + ), + ( + "s", + t1a, + TimedeltaIndex( + ["-1 days +00:00:00", "-2 days +23:58:58", "-2 days +23:57:56"] + ), + ), + ("12min", t1c, TimedeltaIndex(["-1 days", "-1 days", "-1 days"])), + ("h", t1c, TimedeltaIndex(["-1 days", "-1 days", "-1 days"])), + ("d", t1c, -1 * t1c), + ]: + r1 = t1.round(freq) + tm.assert_index_equal(r1, s1) + r2 = t2.round(freq) + tm.assert_index_equal(r2, s2) + + def test_components(self): + rng = timedelta_range("1 days, 10:11:12", periods=2, freq="s") + rng.components + + # with nat + s = Series(rng) + s[1] = np.nan + + result = s.dt.components + assert not result.iloc[0].isna().all() + assert result.iloc[1].isna().all() diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_searchsorted.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_searchsorted.py new file mode 100644 index 0000000000000000000000000000000000000000..710571ef383970097985f44e09ecba77fcf63f74 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_searchsorted.py @@ -0,0 +1,28 @@ +import numpy as np +import pytest + +from pandas import ( + TimedeltaIndex, + Timestamp, +) +import pandas._testing as tm + + +class TestSearchSorted: + def test_searchsorted_different_argument_classes(self, listlike_box): + idx = TimedeltaIndex(["1 day", "2 days", "3 days"]) + result = idx.searchsorted(listlike_box(idx)) + expected = np.arange(len(idx), dtype=result.dtype) + tm.assert_numpy_array_equal(result, expected) + + result = idx._data.searchsorted(listlike_box(idx)) + tm.assert_numpy_array_equal(result, expected) + + @pytest.mark.parametrize( + "arg", [[1, 2], ["a", "b"], [Timestamp("2020-01-01", tz="Europe/London")] * 2] + ) + def test_searchsorted_invalid_argument_dtype(self, arg): + idx = TimedeltaIndex(["1 day", "2 days", "3 days"]) + msg = "value should be a 'Timedelta', 'NaT', or array of those. Got" + with pytest.raises(TypeError, match=msg): + idx.searchsorted(arg) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_setops.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_setops.py new file mode 100644 index 0000000000000000000000000000000000000000..fce10d9176d7438e63a5e46eede1bb96b41bb8bd --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_setops.py @@ -0,0 +1,254 @@ +import numpy as np +import pytest + +import pandas as pd +from pandas import ( + Index, + TimedeltaIndex, + timedelta_range, +) +import pandas._testing as tm + +from pandas.tseries.offsets import Hour + + +class TestTimedeltaIndex: + def test_union(self): + i1 = timedelta_range("1day", periods=5) + i2 = timedelta_range("3day", periods=5) + result = i1.union(i2) + expected = timedelta_range("1day", periods=7) + tm.assert_index_equal(result, expected) + + i1 = Index(np.arange(0, 20, 2, dtype=np.int64)) + i2 = timedelta_range(start="1 day", periods=10, freq="D") + i1.union(i2) # Works + i2.union(i1) # Fails with "AttributeError: can't set attribute" + + def test_union_sort_false(self): + tdi = timedelta_range("1day", periods=5) + + left = tdi[3:] + right = tdi[:3] + + # Check that we are testing the desired code path + assert left._can_fast_union(right) + + result = left.union(right) + tm.assert_index_equal(result, tdi) + + result = left.union(right, sort=False) + expected = TimedeltaIndex(["4 Days", "5 Days", "1 Days", "2 Day", "3 Days"]) + tm.assert_index_equal(result, expected) + + def test_union_coverage(self): + idx = TimedeltaIndex(["3d", "1d", "2d"]) + ordered = TimedeltaIndex(idx.sort_values(), freq="infer") + result = ordered.union(idx) + tm.assert_index_equal(result, ordered) + + result = ordered[:0].union(ordered) + tm.assert_index_equal(result, ordered) + assert result.freq == ordered.freq + + def test_union_bug_1730(self): + rng_a = timedelta_range("1 day", periods=4, freq="3h") + rng_b = timedelta_range("1 day", periods=4, freq="4h") + + result = rng_a.union(rng_b) + exp = TimedeltaIndex(sorted(set(rng_a) | set(rng_b))) + tm.assert_index_equal(result, exp) + + def test_union_bug_1745(self): + left = TimedeltaIndex(["1 day 15:19:49.695000"]) + right = TimedeltaIndex( + ["2 day 13:04:21.322000", "1 day 15:27:24.873000", "1 day 15:31:05.350000"] + ) + + result = left.union(right) + exp = TimedeltaIndex(sorted(set(left) | set(right))) + tm.assert_index_equal(result, exp) + + def test_union_bug_4564(self): + left = timedelta_range("1 day", "30d") + right = left + pd.offsets.Minute(15) + + result = left.union(right) + exp = TimedeltaIndex(sorted(set(left) | set(right))) + tm.assert_index_equal(result, exp) + + def test_union_freq_infer(self): + # When taking the union of two TimedeltaIndexes, we infer + # a freq even if the arguments don't have freq. This matches + # DatetimeIndex behavior. + tdi = timedelta_range("1 Day", periods=5) + left = tdi[[0, 1, 3, 4]] + right = tdi[[2, 3, 1]] + + assert left.freq is None + assert right.freq is None + + result = left.union(right) + tm.assert_index_equal(result, tdi) + assert result.freq == "D" + + def test_intersection_bug_1708(self): + index_1 = timedelta_range("1 day", periods=4, freq="h") + index_2 = index_1 + pd.offsets.Hour(5) + + result = index_1.intersection(index_2) + assert len(result) == 0 + + index_1 = timedelta_range("1 day", periods=4, freq="h") + index_2 = index_1 + pd.offsets.Hour(1) + + result = index_1.intersection(index_2) + expected = timedelta_range("1 day 01:00:00", periods=3, freq="h") + tm.assert_index_equal(result, expected) + assert result.freq == expected.freq + + def test_intersection_equal(self, sort): + # GH 24471 Test intersection outcome given the sort keyword + # for equal indices intersection should return the original index + first = timedelta_range("1 day", periods=4, freq="h") + second = timedelta_range("1 day", periods=4, freq="h") + intersect = first.intersection(second, sort=sort) + if sort is None: + tm.assert_index_equal(intersect, second.sort_values()) + tm.assert_index_equal(intersect, second) + + # Corner cases + inter = first.intersection(first, sort=sort) + assert inter is first + + @pytest.mark.parametrize("period_1, period_2", [(0, 4), (4, 0)]) + def test_intersection_zero_length(self, period_1, period_2, sort): + # GH 24471 test for non overlap the intersection should be zero length + index_1 = timedelta_range("1 day", periods=period_1, freq="h") + index_2 = timedelta_range("1 day", periods=period_2, freq="h") + expected = timedelta_range("1 day", periods=0, freq="h") + result = index_1.intersection(index_2, sort=sort) + tm.assert_index_equal(result, expected) + + def test_zero_length_input_index(self, sort): + # GH 24966 test for 0-len intersections are copied + index_1 = timedelta_range("1 day", periods=0, freq="h") + index_2 = timedelta_range("1 day", periods=3, freq="h") + result = index_1.intersection(index_2, sort=sort) + assert index_1 is not result + assert index_2 is not result + tm.assert_copy(result, index_1) + + @pytest.mark.parametrize( + "rng, expected", + # if target has the same name, it is preserved + [ + ( + timedelta_range("1 day", periods=5, freq="h", name="idx"), + timedelta_range("1 day", periods=4, freq="h", name="idx"), + ), + # if target name is different, it will be reset + ( + timedelta_range("1 day", periods=5, freq="h", name="other"), + timedelta_range("1 day", periods=4, freq="h", name=None), + ), + # if no overlap exists return empty index + ( + timedelta_range("1 day", periods=10, freq="h", name="idx")[5:], + TimedeltaIndex([], freq="h", name="idx"), + ), + ], + ) + def test_intersection(self, rng, expected, sort): + # GH 4690 (with tz) + base = timedelta_range("1 day", periods=4, freq="h", name="idx") + result = base.intersection(rng, sort=sort) + if sort is None: + expected = expected.sort_values() + tm.assert_index_equal(result, expected) + assert result.name == expected.name + assert result.freq == expected.freq + + @pytest.mark.parametrize( + "rng, expected", + # part intersection works + [ + ( + TimedeltaIndex(["5 hour", "2 hour", "4 hour", "9 hour"], name="idx"), + TimedeltaIndex(["2 hour", "4 hour"], name="idx"), + ), + # reordered part intersection + ( + TimedeltaIndex(["2 hour", "5 hour", "5 hour", "1 hour"], name="other"), + TimedeltaIndex(["1 hour", "2 hour"], name=None), + ), + # reversed index + ( + TimedeltaIndex(["1 hour", "2 hour", "4 hour", "3 hour"], name="idx")[ + ::-1 + ], + TimedeltaIndex(["1 hour", "2 hour", "4 hour", "3 hour"], name="idx"), + ), + ], + ) + def test_intersection_non_monotonic(self, rng, expected, sort): + # 24471 non-monotonic + base = TimedeltaIndex(["1 hour", "2 hour", "4 hour", "3 hour"], name="idx") + result = base.intersection(rng, sort=sort) + if sort is None: + expected = expected.sort_values() + tm.assert_index_equal(result, expected) + assert result.name == expected.name + + # if reversed order, frequency is still the same + if all(base == rng[::-1]) and sort is None: + assert isinstance(result.freq, Hour) + else: + assert result.freq is None + + +class TestTimedeltaIndexDifference: + def test_difference_freq(self, sort): + # GH14323: Difference of TimedeltaIndex should not preserve frequency + + index = timedelta_range("0 days", "5 days", freq="D") + + other = timedelta_range("1 days", "4 days", freq="D") + expected = TimedeltaIndex(["0 days", "5 days"], freq=None) + idx_diff = index.difference(other, sort) + tm.assert_index_equal(idx_diff, expected) + tm.assert_attr_equal("freq", idx_diff, expected) + + # preserve frequency when the difference is a contiguous + # subset of the original range + other = timedelta_range("2 days", "5 days", freq="D") + idx_diff = index.difference(other, sort) + expected = TimedeltaIndex(["0 days", "1 days"], freq="D") + tm.assert_index_equal(idx_diff, expected) + tm.assert_attr_equal("freq", idx_diff, expected) + + def test_difference_sort(self, sort): + index = TimedeltaIndex( + ["5 days", "3 days", "2 days", "4 days", "1 days", "0 days"] + ) + + other = timedelta_range("1 days", "4 days", freq="D") + idx_diff = index.difference(other, sort) + + expected = TimedeltaIndex(["5 days", "0 days"], freq=None) + + if sort is None: + expected = expected.sort_values() + + tm.assert_index_equal(idx_diff, expected) + tm.assert_attr_equal("freq", idx_diff, expected) + + other = timedelta_range("2 days", "5 days", freq="D") + idx_diff = index.difference(other, sort) + expected = TimedeltaIndex(["1 days", "0 days"], freq=None) + + if sort is None: + expected = expected.sort_values() + + tm.assert_index_equal(idx_diff, expected) + tm.assert_attr_equal("freq", idx_diff, expected) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_timedelta.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_timedelta.py new file mode 100644 index 0000000000000000000000000000000000000000..3120066741ffa292dc1533056438ebf481cb1849 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_timedelta.py @@ -0,0 +1,61 @@ +import numpy as np +import pytest + +from pandas import ( + Index, + Series, + Timedelta, + timedelta_range, +) +import pandas._testing as tm + + +class TestTimedeltaIndex: + def test_misc_coverage(self): + rng = timedelta_range("1 day", periods=5) + result = rng.groupby(rng.days) + assert isinstance(next(iter(result.values()))[0], Timedelta) + + def test_map(self): + # test_map_dictlike generally tests + + rng = timedelta_range("1 day", periods=10) + + f = lambda x: x.days + result = rng.map(f) + exp = Index([f(x) for x in rng], dtype=np.int64) + tm.assert_index_equal(result, exp) + + def test_fields(self): + rng = timedelta_range("1 days, 10:11:12.100123456", periods=2, freq="s") + tm.assert_index_equal(rng.days, Index([1, 1], dtype=np.int64)) + tm.assert_index_equal( + rng.seconds, + Index([10 * 3600 + 11 * 60 + 12, 10 * 3600 + 11 * 60 + 13], dtype=np.int32), + ) + tm.assert_index_equal( + rng.microseconds, + Index([100 * 1000 + 123, 100 * 1000 + 123], dtype=np.int32), + ) + tm.assert_index_equal(rng.nanoseconds, Index([456, 456], dtype=np.int32)) + + msg = "'TimedeltaIndex' object has no attribute '{}'" + with pytest.raises(AttributeError, match=msg.format("hours")): + rng.hours + with pytest.raises(AttributeError, match=msg.format("minutes")): + rng.minutes + with pytest.raises(AttributeError, match=msg.format("milliseconds")): + rng.milliseconds + + # with nat + s = Series(rng) + s[1] = np.nan + + tm.assert_series_equal(s.dt.days, Series([1, np.nan], index=[0, 1])) + tm.assert_series_equal( + s.dt.seconds, Series([10 * 3600 + 11 * 60 + 12, np.nan], index=[0, 1]) + ) + + # preserve name (GH15589) + rng.name = "name" + assert rng.days.name == "name" diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_timedelta_range.py b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_timedelta_range.py new file mode 100644 index 0000000000000000000000000000000000000000..f22bdb7a90516a7162ebdb1cc2d8cbfd9531b9e7 --- /dev/null +++ b/omnilmm/lib/python3.10/site-packages/pandas/tests/indexes/timedeltas/test_timedelta_range.py @@ -0,0 +1,173 @@ +import numpy as np +import pytest + +from pandas import ( + Timedelta, + TimedeltaIndex, + timedelta_range, + to_timedelta, +) +import pandas._testing as tm + +from pandas.tseries.offsets import ( + Day, + Second, +) + + +class TestTimedeltas: + def test_timedelta_range_unit(self): + # GH#49824 + tdi = timedelta_range("0 Days", periods=10, freq="100000D", unit="s") + exp_arr = (np.arange(10, dtype="i8") * 100_000).view("m8[D]").astype("m8[s]") + tm.assert_numpy_array_equal(tdi.to_numpy(), exp_arr) + + def test_timedelta_range(self): + expected = to_timedelta(np.arange(5), unit="D") + result = timedelta_range("0 days", periods=5, freq="D") + tm.assert_index_equal(result, expected) + + expected = to_timedelta(np.arange(11), unit="D") + result = timedelta_range("0 days", "10 days", freq="D") + tm.assert_index_equal(result, expected) + + expected = to_timedelta(np.arange(5), unit="D") + Second(2) + Day() + result = timedelta_range("1 days, 00:00:02", "5 days, 00:00:02", freq="D") + tm.assert_index_equal(result, expected) + + expected = to_timedelta([1, 3, 5, 7, 9], unit="D") + Second(2) + result = timedelta_range("1 days, 00:00:02", periods=5, freq="2D") + tm.assert_index_equal(result, expected) + + expected = to_timedelta(np.arange(50), unit="min") * 30 + result = timedelta_range("0 days", freq="30min", periods=50) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize( + "depr_unit, unit", + [ + ("H", "hour"), + ("T", "minute"), + ("t", "minute"), + ("S", "second"), + ("L", "millisecond"), + ("l", "millisecond"), + ("U", "microsecond"), + ("u", "microsecond"), + ("N", "nanosecond"), + ("n", "nanosecond"), + ], + ) + def test_timedelta_units_H_T_S_L_U_N_deprecated(self, depr_unit, unit): + # GH#52536 + depr_msg = ( + f"'{depr_unit}' is deprecated and will be removed in a future version." + ) + + expected = to_timedelta(np.arange(5), unit=unit) + with tm.assert_produces_warning(FutureWarning, match=depr_msg): + result = to_timedelta(np.arange(5), unit=depr_unit) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize( + "periods, freq", [(3, "2D"), (5, "D"), (6, "19h12min"), (7, "16h"), (9, "12h")] + ) + def test_linspace_behavior(self, periods, freq): + # GH 20976 + result = timedelta_range(start="0 days", end="4 days", periods=periods) + expected = timedelta_range(start="0 days", end="4 days", freq=freq) + tm.assert_index_equal(result, expected) + + @pytest.mark.parametrize("msg_freq, freq", [("H", "19H12min"), ("T", "19h12T")]) + def test_timedelta_range_H_T_deprecated(self, freq, msg_freq): + # GH#52536 + msg = f"'{msg_freq}' is deprecated and will be removed in a future version." + + result = timedelta_range(start="0 days", end="4 days", periods=6) + with tm.assert_produces_warning(FutureWarning, match=msg): + expected = timedelta_range(start="0 days", end="4 days", freq=freq) + tm.assert_index_equal(result, expected) + + def test_errors(self): + # not enough params + msg = ( + "Of the four parameters: start, end, periods, and freq, " + "exactly three must be specified" + ) + with pytest.raises(ValueError, match=msg): + timedelta_range(start="0 days") + + with pytest.raises(ValueError, match=msg): + timedelta_range(end="5 days") + + with pytest.raises(ValueError, match=msg): + timedelta_range(periods=2) + + with pytest.raises(ValueError, match=msg): + timedelta_range() + + # too many params + with pytest.raises(ValueError, match=msg): + timedelta_range(start="0 days", end="5 days", periods=10, freq="h") + + @pytest.mark.parametrize( + "start, end, freq, expected_periods", + [ + ("1D", "10D", "2D", (10 - 1) // 2 + 1), + ("2D", "30D", "3D", (30 - 2) // 3 + 1), + ("2s", "50s", "5s", (50 - 2) // 5 + 1), + # tests that worked before GH 33498: + ("4D", "16D", "3D", (16 - 4) // 3 + 1), + ("8D", "16D", "40s", (16 * 3600 * 24 - 8 * 3600 * 24) // 40 + 1), + ], + ) + def test_timedelta_range_freq_divide_end(self, start, end, freq, expected_periods): + # GH 33498 only the cases where `(end % freq) == 0` used to fail + res = timedelta_range(start=start, end=end, freq=freq) + assert Timedelta(start) == res[0] + assert Timedelta(end) >= res[-1] + assert len(res) == expected_periods + + def test_timedelta_range_infer_freq(self): + # https://github.com/pandas-dev/pandas/issues/35897 + result = timedelta_range("0s", "1s", periods=31) + assert result.freq is None + + @pytest.mark.parametrize( + "freq_depr, start, end, expected_values, expected_freq", + [ + ( + "3.5S", + "05:03:01", + "05:03:10", + ["0 days 05:03:01", "0 days 05:03:04.500000", "0 days 05:03:08"], + "3500ms", + ), + ( + "2.5T", + "5 hours", + "5 hours 8 minutes", + [ + "0 days 05:00:00", + "0 days 05:02:30", + "0 days 05:05:00", + "0 days 05:07:30", + ], + "150s", + ), + ], + ) + def test_timedelta_range_deprecated_freq( + self, freq_depr, start, end, expected_values, expected_freq + ): + # GH#52536 + msg = ( + f"'{freq_depr[-1]}' is deprecated and will be removed in a future version." + ) + + with tm.assert_produces_warning(FutureWarning, match=msg): + result = timedelta_range(start=start, end=end, freq=freq_depr) + expected = TimedeltaIndex( + expected_values, dtype="timedelta64[ns]", freq=expected_freq + ) + tm.assert_index_equal(result, expected) diff --git a/omnilmm/lib/python3.10/site-packages/pandas/tests/tseries/__pycache__/__init__.cpython-310.pyc b/omnilmm/lib/python3.10/site-packages/pandas/tests/tseries/__pycache__/__init__.cpython-310.pyc new file mode 100644 index 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