diff --git "a/val.jsonl" "b/val.jsonl" new file mode 100644--- /dev/null +++ "b/val.jsonl" @@ -0,0 +1,139 @@ +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: GAMGATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKLAAM\nAntibody Sequence: QVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS", "output": "Paratope: 0000000000000000000000000000011010000000000000000001110010100000000000000000000000000000000000000011111111001000000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: ATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLAIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKLAAM\nAntibody Sequence: QVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS", "output": "Paratope: 0000000000000000000000000011011010000000000000000000110010100000000000000000000000000000000000000011111111001100000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: DVAIVKEGWLHKRGKYIKTWRPRYFLLKNDGTFIGYKERPQDEAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKKQEEEEMDASAEHTDMEVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGITFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFD\nAntibody Sequence: QVQLQESGGGLVQAGGSLRLSCAASGIDVRIKTMAWYRQAPGKQRELLASVLVSGSTNYADPVKGRFTISRDNAKNTVYLQMNKLIPDDTAVYYCNTYGRLRRDVWGPGTQVTVSS", "output": "Paratope: 00000000000000000000000000000011111010000000101011011000011100000000000000000000000000000000000111111110000000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: DVAIVKEGWLHKRGKYIKTWRPRYFLLKNDGTFIGYKERPQDEAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKKQEEEEMDASAEHTDMERVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGITFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQ\nAntibody Sequence: VQLQESGGGLVQAGGSLRLSCAASGIDVRIKTMAWYRQAPGKQRELLASVLVSGSTNYADPVKGRFTISRDNAKNTVYLQMNKLIPDDTAVYYCNTYGRLRRDVWGPGTQVTV", "output": "Paratope: 00000000000000000000000000000111110100000001010110110000110000000000000000000000000000000000001111111100000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: PSDKPVAHVVANPQAEGQLQWLNRRANALLANGVELRDNQLVVPSEGLYLIYSQVLFKGQGCPSTHVLLTHTISRIAVSYQTKVNLLSAIKSPCQAKPWYEPIYLGGVFQLEKGDRLSAEINRPDYLDFAESGQVYFGIIAL\nAntibody Sequence: EVQLVESGGGLVQPGGSLRLSCAASGFTFSDYWMYWVRQAPGKGLEWVSEINTNGLITKYPDSVKGRFTISRDNAKNTLYLQMNSLRPEDTAVYYCARSPSGFNRGQGTLVTVSS", "output": "Paratope: 0000000000000000000000000000001110100000000000000101110110100000000000000000000000000000000000000111101000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: SDKPVAHVVANPQAEGQLQWLNRRANALLANGVELRDNQLVVPSEGLYLIYSQVLFKGQGCPSTHVLLTHTISRIAVSYQTKVNLLSAIKSPCQKPWYEPIYLGGVFQLEKGDRLSAEINRPDYLDFAESGQVYFGIIAL\nAntibody Sequence: EVQLVESGGGLVQPGGSLRLSCAASGFTFSDYWMYWVRQAPGKGLEWVSEINTNGLITKYPDSVKGRFTISRDNAKNTLYLQMNSLRPEDTAVYYCARSPSGFNRGQGTLVTVSS", "output": "Paratope: 0000000000000000000000000000001110100000000000000101110110100000000000000000000000000000000000000111101000000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: KSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVAADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAALGL\nAntibody Sequence: EVQLVESGGGLVQPGNSLRLSCAASGFTFSSFGMSWVRQAPGKGLEWVSSISGSGSDTLYADSVKGRFTISRDNAKTTLYLQMNSLRPEDTAVYYCTIGGSLSRSSQGTLVTVSS", "output": "Paratope: 1100000000000000000000000111001111100000000000000111110011100000000000000000000000000000000000000111111010000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: DPIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNA\nAntibody Sequence: VQLQESGGGLVQPGGSLRLSCAASGFTFDDYAIGWFRQAPEREGVSCISSSDGSTYYADSVKGRFTISSDNAKNTVYLQMNSLKPEDTAVYYCAADEYLCTGLAYSDYYPGKYEYDYWGQGTQVTVS", "output": "Paratope: 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100110010001000111100000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: HHSQDPIRRGDVYLADLSPVGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNA\nAntibody Sequence: QVQLQESGGGLVQPGGSLRLSCAASGFTFDNYAIGWFRQAPGKEREGVLCIGSSDGSTYYADSVKGRFTISSDNAKNTVYLQMNSLKPEDTAVYYCAADPWDSGYGCYLDYDYWGQGTQVTVSS", "output": "Paratope: 0000000000000000000000000000000000000000000000000000101111110000000000000000000000000000000000000000001111000000000000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ\nAntibody Sequence: QLQESGGGLVQAGGSLRLSCAASGLPYRTVFMGWFRQGPGKEREGVAVINADGVSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYHCAANHFFDYSRDPLATAEYNYWGQGTQVTVSS", "output": "Paratope: 00000000000000000000000001111100000000000000000001110000000000000000000000000000000000000000000001111110000001101100000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: SAPKDNTWYTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTKANVPGGASFKDHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGDAHTIGTRPDNGMLSLGVSYRFA\nAntibody Sequence: RQLVESGGGLVHTGGSLKLSCVPNGSIFNFNPMGWYRQVSGQQRELVATLTRDGVENYASSVKGRFTISRDSAKNTLYLQMTDVKPGDAAVYICHANYRIGRNDLPVWGKGTPVTVSA", "output": "Paratope: 1100000000000000000000011100110000000000000000000000000000000000000000000000000000000000000000000101111111100000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: IKSSSVLNMRYKNDKYVDTSGYDSNININGDVYKYPTNKNQFGIYNDKLSEVNISQNDYIIYDNKYKNFSISFWVRIPNYDNKIVNVNNEYTIINCMRDNNSGWKVSLNHNEIIWTLQDNAGINQKLAFNYGNANGISDYINKWIFVTITNDRLGDSKLYINGNLIDQKSILNLGNIHVSDNILFKIVNCSYTRYIGIRYFNIFDKELDETEIQTLYSNEPNTNILKDFWGNYLLYDKEYYLLNVLKPNNFIDRRKDSTLSINNIRSTILLANRLYSGIKVKIQRVNNSSTNDNLVRKNDQVYINFVASKTHLFPLYADTATTNKEKTIKISSSGNRFNQVVVMNSVGNNCTMNFKNNNGNNIGLLGFKADTVVASTWYYTHMRDHTNSNGCFWNFISEEHGWQEK\nAntibody Sequence: LQLVETGGGLVKPGGSLRLSCVVSGFTFDDYRMAWVRQAPGKELEWVSSIDSWSINTYYEDSVKGRFTISTDNAKNTLYLQMSSLKPEDTAVYYCAAEDRLGVPTINAHPSKYDYNYWGQGTQVTVSS", "output": "Paratope: 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111111111011111111000000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: VPMRGPEFWRKMDGDVTKKERNVTLLWKPLTKQDSLSSVRRYVVKHRTAHNGTWSEDVGNRTQLTFLWTEPAHTVTVLAVNSLGASLVNFQLTFSWPMSKVSAVESLSAYPLSSSVILSWTLSPDDYSLLYLVIEWKILNEDDGMKWLRIPSNVKKFYIHDNFIPIEKYQFSLYPVFMEGVGKPKIINGFT\nAntibody Sequence: QVQLQESGGGLVQPGGSLRLSCAASGFTLDDYGIAWFRQAPGKEREGVSCISTSDDSTYYADSVKGRFTISRDTAKNTVYLQMNSLKPEDTAVYYCAAERAPMCYSRSYYLVDYGMDYWGKGTQVTVSS", "output": "Paratope: 000000000000000000000000000000000000000000000111110101111011110000000000000000000000000000000000001111001111111101100000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: KVLQEPTCVSDYMSISTCEWKMNGPTNCSTELRLLYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLWAGQQLLWKGSFKPSEHVKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARVRAWAQCYNTTWSEWSPSTKWHNSY\nAntibody Sequence: EVQLQESGGGLVQPGGSLRLSCAASGSTSYRYCMAWFRQAPGKGLEAVASIRPRSGRAYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAMYYCAASDNDGNCQDYWGKGTLVTVS", "output": "Paratope: 0000000000000000000000000000000111101000000000111111011010111000000000000000000000000000000000000000101110000000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: TLPVIEAKGNKFFYSNNGTEFFIRGVAYQQEYNSDYTDPLANVDNCKRDIPYLKQLRTNVIRTYAVDPTKDHDECMKLLDDAGIYLITDLSAPSESINRADPAWNTDLYKRYTSVIDAFAKYSNVIGFFAGNEVANDNNNTNSIAYVKAAVRDMKSYIKSKDYRSSLLVGYATDDDAHIRADLADYLVCGDKESSIDMFGYNIYEWCGDSSFEKSGYKDRTEEFSKYPVPAFFSEYGCIDPKPRKFTDVAALYGPQMNDVWSGGIVYMYFQEANDYGLVSVSGDNVKTKEDFSYLSVQMQKVTATGVNSASYTASNTAVPTCPSVGAKWEASNKLPPSPNSELCDCMVETLSCTVKDSVDEKEYGDLFDYLCAAGVCGGINSNSTSGDYGAYSVCSAKQKLSFVMNQYYKKNNKAATACDFDGKAQTKKGADASGSCASLISQ\nAntibody Sequence: QVQLQESGGGLVQAGGSLRLACAASGNIYSTNAMRWYRQAPGKQRELVAHITRGGRTNYADFVKGRFTISRDNAKNMVDLQMDNLQPEDTAVYYCNVEVRTGPTRSWSPYWGEGTQVTVS", "output": "Paratope: 100000000000000000000000000111111010000000000010010111110000000000000000010000000000000000000000010100111111100000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: MKTVVAIFVVVVVYLVTGGLVFRALEQPFESSQKNTIALEKAEFLRDHVCVSPQELETLIQHALDADNAGVSPIGQSSQQSSHWDLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIFGIPLFGFLLAGIGDQLGTIFGKSIARVEKVFRKKQVSQTKIRVISTILFILAGCIVFVTIPAVIFKYIEGWTALESIYFVVVTLTTVGFGDFVAGGNAGINYREWYKPLVWFWILVGLAYFAAVLSMIGDWLRVLSKKTKEEVG\nAntibody Sequence: QVQLVESGGGLVQAGGSLRLSCAASGRAFSTYVMGWFREAPGKERDFVATLSRGGAVTYYADSVKGRFTISRDNAKNTVYLQMDSLEPEDTAVYYCAARDRLGGAGTATFWGDYDYWGQGTQVTVSS", "output": "Paratope: 0000000000000000000000000000011000000000000000000000110000100100000000000000000000000000000000000010011111111100100000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: KGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGIT\nAntibody Sequence: SMAQVQLVESGGRLVQAGDSLRLSCAASGRTFSTSAMAWFRQAPGREREFVAAITWTVGNTILGDSVKGRFTISRDRAKNTVDLQMDNLEPEDTAVYYCSARSRGYVLSVLRSVDSYDYWGQGTQVTVS", "output": "Paratope: 000000000000000000000000000001011110000000000000000000111100000000000000000010000000000000000000000001111111000000000000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: SKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKVNFKIRHNIEDGSVHLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGITH\nAntibody Sequence: AQVQLVESGGGLVQAGGSLRLSCAASGPTGAMAWFRQAPGMEREFVGGISGSETDTYYADFVKGRLTVDRDNVKNTVDLQMNSLKPEDTAVYYCAARRRVTLFTSRADYDFWGQGTQVTV", "output": "Paratope: 000000000000000000000000000000000000000000011000010000111011100000000000000000000000000000000000101111111111000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: SPMYSIITPNILRLESEETMVLEAHDAQGDVPVTVTVHDFPGKKLVLSSEKTVLTPATNHMGNVTFTIPANREFKSEKGRNKFVTVQATFGTQVVEKVVLVSLQSGYLFIQTDKTIYTPGSTVLYRIFTVNHKLLPVGRTVMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYENSPQQVFSTEFEVKEYVLPSFEVIVEPTEKFYYIYNEKGLEVTITARFLYGKKVEGTAFVIFGIQDGEQRISLPESLKRIPIEDGSGEVVLSRKVLLDGVQNPRAEDLVGKSLYVSATVILHSGSDMVQAERSGIPIVTSPYQIHFTKTPKYFKPGMPFDLMVFVTNPDGSPAYRVPVAVQGEDTVQSLTQGDGVAKLSINTHPSQKPLSITVRTKKQELSEAEQATRTMQALPYSTVGNSNNYLHLSVLRTELRPGETLNVNFLLRMDRAHEAKIRYYTYLIMNKGRLLKAGRQVREPGQDLVVLPLSITTDFIPSFRLVAYYTLIGASGQREVVADSVWVDVKDSCVGSLVVKSGQSEDRQPVPGQQMTLKIEGDHGARVVLVAVDKGVFVLNKKNKLTQSKIWDVVEKADIGCTPGSGKDYAGVFSDAGLTFTSSSGQQTAQRAELQCPQPLDEDIIAEENIVSRSEFPESWLWNVEDLKEPPKNGISTKLMNIFLKDSITTWEILAVSMSDKKGICVADPFEVTVMQDFFIDLRLPYSVVRNEQVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTKRRHQQTVTIPPKSSLSVPYVIVPLKTGLQEVEVKAAVYHHFISDGVRKSLKVVPEGIRMNKTVAVRTLDPERLGREGVQKEDIPPADLSDQVPDTESETRILLQGTPVAQMTEDAVDAERLKHLIVTPSGCGEQNMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQQLAFRQPSSAFAAFVKRAPSTWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQKPDGVFQEDAPVIHQEMIGGLRNNNEKDMALTAFVLISLQEAKDICEEQVNSLPGSITKAGDFLEANYMNLQRSYTVAIAGYALAQMGRLKGPLLNKFLTTAKDKNRWEDPGKQLYNVEATSYALLALLQLKDFDFVPPVVRWLNEQRYYGGGYGSTQATFMVFQALAQYQKDAPDHQELNLDVSLQLPSRSSKITHRIHWESASLLRSEETKENEGFTVTAEGKGQGTLSVVTMYHAKAKDQLTCNKFDLKVTIKPAPETEKRPQDAKNTMILEICTRYRGDQDATMSILDISMMTGFAPDTDDLKQLANGVDRYISKYELDKAFSDRNTLIIYLDKVSHSEDDCLAFKVHQYFNVELIQPGAVKVYAYYNLEESCTRFYHPEKEDGKLNKLCRDELCRCAEENCFIQKSDDKVTLEERLDKACEPGVDYVYKTRLVKVQLSNDFDEYIMAIEQTIKSGSDEVQVGQQRTFISPIKCREALKLEEKKHYLMWGLSSDFWGEKPNLSYIIGKDTWVEHWPEEDECQDEENQKQCQDLGAFTESMVVFGCPN\nAntibody Sequence: QVQLVETGGGLVQAGGSLRLSCAASGSIFSINAMGWFRQAPGKEREFVATINRSGGRTYYADSVKGRFTISRDNGKNMVYLQMHSLKPEDTAIYYCAAGTGWSPQTDCEYNYWGQGTQVTVSS", "output": "Paratope: 000000000000000000000000000000011000000000000000011111011110000000000000000000000000000000000000000111110000100000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: MLQMAGQCSQNEYFDSLLHACIPCQLRCSSNTPPLTCQRYCNASV\nAntibody Sequence: QVKLEESGGGLVQAGRSLRLSCAASEHTFSSHVMGWFRQAPGKERESVAVIGWRDISTSYADSVKGRFTISRDNAKKTLYLQMNSLKPEDTAVYYCAARRIDAADFDSWGQGTQVTVSS", "output": "Paratope: 00000000000000000000000000000000100000000000011111111001111111100000000000000000000000000000000000101111000000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: NLCPFGEVFDATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAP\nAntibody Sequence: VQLVESGGGLVQPGGSLRLSCETSGITLDYYAIGWFLQVPGKEREGVACMRNWDGSTLYAPSVKGRFTISRDADKEVAYLEMNSLKSEDTGVYYCAAGPLPPGHSCRIPTPLGYDDWGQGTQVTVS", "output": "Paratope: 000000000000000000000000001111100000000000000100000000000111100000000000000000000000000000000000011111111111110110100000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: LFPLRCLQISSFANSSWTRTDGLAWLGELQTHSWSNDSDTVRSLKPWSQGTFSDQQWETLQHIFRVYRSSFTRDVKEFAKMLRLSYPLELQVSAGCEVHPNASNNFFHVAFQGKDILSFQGTSWEPTQEAPLWVNLAIQVLNQDKWTRETVQWLLNGTCPQFVSGLLESGKSELKKQVKPKAWLSRGPSPGPGRLLLVCHVSGFYPKPVWVKWMRGEQEQQGTQPGDILPNADETWYLRATLDVVAGEAAGLSCRVKHSSLEGQDIVLYWG\nAntibody Sequence: QVQLVESGGGLVQAGGSLRLSCAASGSSFSSYTMTWFRQAPGKEREIVAGIRWSGESPYYADSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCAARLVPPGIPIERTLESMRYWGKGTLVTVSS", "output": "Paratope: 1000000000000000000000000011011100000000000000000000110100000000000000000100000000000000000000000011111110001100111000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTPEFLTRIKLLLKPTPNTVHYILTHFKGVWNIVNNIPFLRSLIMKYVLTSRSYLIDSPPTYNVHYGYKSWEAFSNLSYYTRALPPVADDCPTPMGVKGNKELPDSKEVLEKVLLRREFIPDPQGSNMMFAFFAQHFTHQFFKTDHKRGPGFTRGLGHGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQEYSFKQFLYNNSILLEHGLTQFVESFTRQIAGRVAGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAAELKALYSDIDVMELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKPSTFGGEVGFKIINTASIQSLICNNVKGCPFTSFNVQ\nAntibody Sequence: QVQLQESGGGLVQPGGSLRLSCAASGSIFSIREWGWYRQAPGKQRELVATITSGGTTNYADSVRGRFTISRDNAKDTVYLQMNSLTPEDTAVYYCNAESDGWYGLSYWGQGTQVTV", "output": "Paratope: 10000000000000000000000000111111000000000000000000011111010000000000001010010000000000000000000000011111101000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPK\nAntibody Sequence: EVQVVESGGGLVQPGGSLRLSCAASGTGSTFSTYAMGWYRQAPGNQHERVAIIDSVGNTNYPDSVKGRFTISRDNAKNTGYLQMNSLKSEDTAVYYCNLGTIWGQGTQVTVSS", "output": "Paratope: 00000000000000000000000000000000001100100001111110010100011111100000000000000000000000000000000101011010000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: QDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKA\nAntibody Sequence: VQLVESGGGLVQPGGSLRLSCAASGFTLDRYAIGWFRQAPGKEREGVSVISDTITAYRNSVKGRFTISRDNAKNTVYLQMNRLKPEDTAIYYCAVRDRGRVYSSTWSGFGSWGQGTQVTIS", "output": "Paratope: 0000000000000000000000000000110100000000000000001111011111100100000000000000000000000000000000011111111111000000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: AEEFPVPNGFESAYREVDGVKLHYVKGGQGPLVMLVHGFGQTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPPKTGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQMPTMTLAGGGHGGMGTFQLEQMKAYAEDVEGHVLPGCGHWLPEECAAPMNRLVIDFLS\nAntibody Sequence: EVQLVESGGGLVQPGGSLRLSCTTSTSLFSITTMGWYRQAPGKQRELVASIKRGGGTNYADSMKGRFTISRDNARNTVFLEMNNLTTEDTAVYYCNAAILAYTGEVTNYWGQGTQVTVS", "output": "Paratope: 00000000000000000000000001001111100000000000000000011000000000000000000000000000000000000000000001111111110000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: MGSAFERVVRRVVQELDHGGEFIPVTSLQSSTGFQPYCLVVRKPSSSWFWKPRYKCVNLSIKDILEPDAAEPDVQRGRSFHFYDAMSSSTSMNVYSLSVDPNTWQTLLHERHLRQPEHKVLQQLRSRGDNVYVVTEVLQTQKEVEVTVTIPSGSTLAFRVAQLVIDSDLDVLLFPDKKQRTFQPPATGLTDGVPAEGAFTEDFQGLRAEVETISKELELLDRELCQLLLEGLEGVLRDQLALRALEEALEQGGPVEPLDGPAGAVLECLVLSSGMLVPELAIPVVYLLGALTMLSETQHKLLAEALESQTLLGPLELVGSLLEQSAPWQERSTMSLPPGLLSWGEGAPAWVLLDECGLELGEDTPHVCWEPQAQGRMCALYASLALLSGLS\nAntibody Sequence: VQLVESGGGLVQPGGSLRLSCVDSRSWINVYGANWYRQAPGKERELVAALTSGGTTNYADSVKGRFTISRDNAKNTVYLQMRDLKPEDTAVYYCNLERYTGSSVYPWGQGTQVTVS", "output": "Paratope: 10000000000000000000000010100110000000000000000000010000000000000000000000000000000000000000000011111111111000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: DMDQFMRKRIEAIRGQILSKLKLTSPPEYPEPEVPPEVISIYNSTRDLLQEKASREEYYAKEVYKIDMPPFFPSENAIPPTFYRPYFRIVRFDVSAMEKRASNLVKAEFRVFRLQNPKARVPEQRIELYQILKSTSPTQRYIDSKVVKTRAEGEWLSFDVTDAVHEWLHHKDRNLGFKISLHCPEELEARFAGIDGTGKTPHLLLMLLPSYRLEGALDAAYCFRNVQDNCCLRPLYIDFKRDLGWKWIHEPKGYNANFCAGACPYLVLSLYNTINPEASASPCCVSQDLEPLTILYYIGKTPKIEQLSNMIVKSCKCS\nAntibody Sequence: QVQLQESGGGLVQAGGSLRLSCAASGYISNDDVMGWYRQAPGKEREFVAAISVGASTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAQSEGYWFGYWGQGTQVTVS", "output": "Paratope: 00000000000000000000000000101110100010000001111001111111111100000000000000000000000000000000000001111111001000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: VQLVESGGGLVQAGGSLRLSCTASGRTGTIYSMAWFRQAPGKEREFLATVGWSSGITYYMDSVKGRFTISRDKGKNTVYLQMDSLKPEDTAVYYCTATRAYSVGYDYWGQGTQVTVSS\nAntibody Sequence: VQLVESGGGLVQAGGSLRLSCTASGRTGTIYSMAWFRQAPGKEREFLATVGWSSGITYYMDSVKGRFTISRDKGKNTVYLQMDSLKPEDTAVYYCTATRAYSVGYDYWGQGTQVTVS", "output": "Paratope: 000000000000000000000000000000110001100000111100111101011101010000000000000000000000010100000000001111111101000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: ASTNKEYVCDFTDQLKPTESGPKVKKCEVKVNEPLIKVKIICPLKGSVEKLYDNIEYVPKKSPYVVLTKEETKLKEKLLSKLIYGLLISPTVNEKENNFKEGVIEFTLPPVVHKATVFYFICDNSKTEDDNKKGNRGIVEVYVEPYG\nAntibody Sequence: QVQLQESGGGLVQPGGSLRLSCAASGFTLDRYAIGWFRQAPGKEREGVSCISSSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCARDHGPCTVLADILYDYGMDYWGKGTQVTVSS", "output": "Paratope: 00000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000111101011011101100000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPK\nAntibody Sequence: QVQLQESGGGLVQPGGSLRLSCAVSGFTLDYYAIGWFRQAPGKEREGVSCISSSDGSTSYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTALYYCAATPATYYSGRYYYQCPAGGMDYWGQGTQVTVSS", "output": "Paratope: 0000000000000000000000000001111100000000000000111100000000111100000000000000000000000000000000000011111100111011111111100000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP\nAntibody Sequence: QVQLQESGGGLVQPGGSLRLSCAVSGFTLDYYAIGWFRQAPGKEREGVSCISSSDGSTSYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTALYYCAATPATYYSGRYYYQCPAGGMDYWGQGTQVTVSS", "output": "Paratope: 0000000000000000000000000001111100000000000000111100000000111100000000000000000000000000000000000011111100011011111111100000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKS\nAntibody Sequence: VQLQESGGGLVQPGGSLRLTCAPSGFTLDYYAIGWFRQAPGKEREGVSCISSNNSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAEPDYSGVYYYTCGWTDFGSWGQGTQVTVSSH", "output": "Paratope: 0000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000001111111111111111110000000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDMSGSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGCYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMCAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHDHEATLRCWALSFYPAEITLTWQRDGEDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRW\nAntibody Sequence: EVKLVESGGGLVQPGGSLRLSCAASGSIFSINTMGWYRQTPGKQRDLVADISSGGSTKYGDSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCYGLSYSNDDYWGQGTQVTVS", "output": "Paratope: 0000000000000000000000000000000110001010001111100101110101000000000000000000000000000000000000010111111101000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: YMLDLQPETTDLIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDGSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGAYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRW\nAntibody Sequence: EVKLVESGGGLVQPGGSLRLSCAASGSIFSINTMGWYRQTPGKQRDLVADISSGGSTKYGDSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCYGLSYSNDDYWGQGTQVTVS", "output": "Paratope: 0000000000000000000000000000000110001010001111100101110101000000000000000000000000000000000000010111111101000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: YMLDLQPETTDLIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDGSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGAYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHRCWALSFYPAEITLTWELVETRPAGDGTFQKWAAVTCHVKPLTLRW\nAntibody Sequence: EVKLVESGGGLVQPGGSLRLSCAASGSIFSINTMGWYRQTPGKQRDLVADISSGGSTKYGDSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCYGLSYSNDDYWGQGTQVTVS", "output": "Paratope: 0000000000000000000000000000000110001010001111100101110101000000000000000000000000000000000000010111111101000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: YMLDLIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDSGSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGCYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMCAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTLRCWALSFYPAEITLTWQRTELVETRPAGDGTFQKWAAVYTCHVQHEGLPKPLTLRW\nAntibody Sequence: EVKLVESGGGLVQPGGSLRLSCAASGSIFSINTMGWYRQTPGKQRDLVADISSGGSTKYGDSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCYGLSYSNDDYWGQGTQVTVS", "output": "Paratope: 0000000000000000000000000000000110001010011111100101110101000000000000000000000000000000000000010111111101000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: NLCPFGEVFNATRFASVYAWNRKRISNCVADYSFLYNSFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPK\nAntibody Sequence: EVQLVESGGGTVQPGGSLRLSCEVSGTGFTINAMGWDRQAPGKQRELVATITRGDRIHYADSVKGRFAISRDKDKNTVYLEMNNLKPEDTAVYYCDVAAFDSSDYEVLDSWGQGTQVTVSS", "output": "Paratope: 1000000000000000000000000000010110001000000111100101110101010000000000000000000000000000000000011101000111111010000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: TVASIVGIGAEVTIFLLPIAGISAGIPSLVNNELILHDKATSVVNYFNHLSESKKYGPLKTEDDKILVPIDDLVISEIDFNNNSIKLGTCNILAMEGGSGHTVTGNIDHFFSSPSISSHIPSLSIYSAIGIETENLDFSKKIMMLPNAPSRVFWWETGAVPGLRSLENDGTRLLDSIRDLYPGKFYWRFYAFFDYAITTLKPVYEDTNIKIKLDKDTRNFIMPTITTNEIRNKLSYSFDGAGGTYSLLLSSYPISTNINLSKDDLWIFNIDNEVREISIENGTIKKGKLIKDVLSKIDINKNKLIIGNQTIDFSGDIDNKDRYIFLTCELDDKISLIIEINLVAKSYSLLLSGDKNYLISNLSNTIEKINTLGLDSKNIAYNYTD\nAntibody Sequence: QVQLVESGGGLVQPGGSLRLSCAASGFTFSDYVMTWVRQAPGKGPEWIATINTDGSTMRDDSTKGRFTISRDNAKNTLYLQMTSLKPEDTALYYCARGRVISASAIRGAVRGPGTQVTVSS", "output": "Paratope: 0000000000000000000000000000001110000000000001100001110111111100010000000000000000000001000000001011110110000000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: EEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL\nAntibody Sequence: QVQLVESGGGLVQAGGSLRLSCAASGSIRSLNAMGWYRQAPGKQRELVAAITSRGSTRYGDFVKGRFTISRGNAKNTVYLQMNSLSVEDTAVYYCKQTQLGYDYWGQGTQVTVSS", "output": "Paratope: 0000000000000000000000000000001110000000000000000001111100000000000000000000000000000000000000010101111000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: EGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL\nAntibody Sequence: QVQLVESGGGSVQAGGSLRLSCAASGSIFSINAMGWYRQAPGKQRELVAAITRRGSTNYADFVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCKARIEPDSSWGTEYEYWGQGTQVTVS", "output": "Paratope: 0000000000000000000000000000000110000000000000000001011100000000000000000000000000000000000000010101000001010100000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: EEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL\nAntibody Sequence: QVQLVESGGGVVQAGGSLRLSCAASGSIFSSNAMAWYRQAPGNVRRLVAAISSRGDNTNYEDSVRGRFTISRDNAENTVSLQMNSLKPEDTAIYYCNVGSFYRGNYYGGSSWGQGTQVTVSSH", "output": "Paratope: 000000000000000000000000000000000000101011111110000000000000100000000000000000000000000000000000011101101111111100000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: EEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL\nAntibody Sequence: QVQLVESGGGVVQAGGSLRLSCAASGSIFSSNAMAWYRQAPGNVRRLVAAISSRGDNTNYEDSVRGRFTISRDNAENTVSLQMNSLKPEDTAIYYCNVGSFYRGNYYGGSSWGQGTQVTVSSHH", "output": "Paratope: 0000000000000000000000000000000000001010111111100000000000001000000000000000000000000000000000000111011011111111000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYMESEFRVYSSANNCTFEYVSQPFLNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS\nAntibody Sequence: EVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWIGNIYHDGSTFYNPSLKSLVTISRDDSTNTLYLQMNSLRAEDTAIYYCARVWLYGSGYMDVWGKGTLVTVSS", "output": "Paratope: 00000000000000000000000000000000001000100000101001011101011110000000000000000000000000000000010001111111111011000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: NDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKTDRSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRVIERATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQ\nAntibody Sequence: QMQLVESGGGLVQAGGSLRLSCAVSGSIFSIITLAWYRQAPGKPRENVATITRGSRTSYCDSVKGRFTISKDNAKSTVYLQMNKLKPEDTADYYCNAEGPAGYWGQGTPVTVS", "output": "Paratope: 00000000000000000000000000010011101010000000011101011001011100000000000000000000000000000000000101111110000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKSLLIVNNATNVVIKVCEFQFCNDPFLGVCTFEYVSFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS\nAntibody Sequence: QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCAGSKITRSLLSDYATWPYDYWGQGTQVTVSSK", "output": "Paratope: 00000000000000000000000000100010000000000000000000010110110000000000000000000000000000000000000000011111110100000010000000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVNCTFEYVSKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS\nAntibody Sequence: VQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCASYQATRSLLSDYATWPYDYWGQGTQVTVS", "output": "Paratope: 00000000000000000000000001010100000000000000000000101101100000000000000000000000000000000000000000111111101000100000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFNNCTFEYVSFKNLREFVFKNYFKIYSKHTPINDLPQGFSALEPLVDLPIGINITRFQTLLAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTSQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS\nAntibody Sequence: VQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCASYQATRSLLSDYATWPYDYWGQGTQVTVS", "output": "Paratope: 00000000000000000000000001010100000000000000000000101001000000000000000000000000000000000000000000111111100000100110000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKSLLIVNNATNVVIKVCEFQFCNDPFLGVCTFEYVSFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS\nAntibody Sequence: VQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCASYQATRSLLSDYATWPYDYWGQGTQVTVS", "output": "Paratope: 00000000000000000000000001010100000000000000000000101101100000000000000000000000000000000000000000111111101000100100000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG\nAntibody Sequence: HVQLVESGGGLVQAGGSLRLSCATSGRTFSTYRMSWFRQAPGKEREFVATIIWSVGSTHYADSVKGRFTISRDNAKNMVYLQMNSLKPEDTAVYYCAAQRSDSSSWGYEDDYDYWGQGTQVTVSS", "output": "Paratope: 11000000000000000000000001110111000000000000000000001100000000000000000000000000000000000000000000011111110100101100000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: CVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTSQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS\nAntibody Sequence: NSHVQLVESGGGLVQAGGSLRLSCAASGTISTLNAMGWYRQAPGKQRELLASISNLGTTYHADSVAGRFTISRGSAKNTVNLQMNSLKPDDTAVYYCNTRVLEGGTQIRDYWGQGTQVTVSS", "output": "Paratope: 00000000000000000000000000000001011110100000000010011111011100000000000000001000000000000000000001010101111100000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: ADCAKGKIEFSKYNEDDTFTVKVDGKEYWTSRWNLQPLLQSAQLTGMTVTIKSSTCESGSGFAEVQFNNDL\nAntibody Sequence: QVQLQESGGGLVQPGGSLRLSCAASGFTFSSYYMSWVRQAPGKGPEWVSGINTGGVGTRYADSVKGRFTISRDNAKNTLYLQMNSLKPEDTALYYCAIGEGGNRNYWGQGTQVTVSS", "output": "Paratope: 000000000000000000000000000000001000100000001110000100001110000000000000000000000000000000000000001111110010000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: GPMNIINTSILNLRYESNHLIDLSRYASKINIGSKVNFDPIDKNQIQLFNLESSKIEVILKNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSGWKVSLNYGEIIWTLQDTQEIKQRVVFKYSQMINISDYINRWIFVTITNNRLNNSKIYINGRLIDQKPISNLGNIHASNNIMFKLDGCRDTHRYIWIKYFNLFDKELNEKEIKDLYDNQSNSGILKDFWGDYLQYDKPYYMLNLYDPNKYVDVNNVGIRGYMYLKGPRGSVMTTNIYLNSSLYRGAKFIIKKYNKDNIVRNNDRVYINVVVKNKEYRLATNASQAGVEKILSALEIPDVGNLSQVVVMKSKNDQGITNKCKMNLQDNNGNDIGFIGFHQFNNIAKLVASNWYNRQIERSSRTLGCSWEFIPVDDGWGERPL\nAntibody Sequence: QVQLVESGGGLAQPGGSLRLSCEASGFGTWFRFDENTVNWYRQPPGKSREFDELVARYPKSGIVTYLDSVKGRFTISRDNAKKMAFLQMDNLKPEDTAVYYCNVGEFWGQGTQVTISSE", "output": "Paratope: 11000000000000000000000001111101000010000000000011010111101010111111001000000000000000000000000000000000111100000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: SQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSPITELLEQN\nAntibody Sequence: QVQLQESGGGLVQPGGSLRLSCSASGFKFNDSYMSWVRRVPGKGLEWVAGIWEDSSAAHYRDSVKGRFTISRDNAKNMLYLQMSSLKSDDTGLYYCVRRGYSGDYRPINNPSSQGTQVTVSSAA", "output": "Paratope: 0000000000000000000000000000000010000010000000100001100010100000000000000000000000000000000000000011111111111111000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: SQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSPITELLEQN\nAntibody Sequence: QVQLQESGGGLVQPGGSLRLSCSASGFKFNDSYMSWVRRVPGKGLEWVAGIWEDSSAAHYRDSVKGRFTISRDNAKNMLYLQMSSLKSDDTGLYYCVRRGYSGDYRPINNPSSQGTQVTVSS", "output": "Paratope: 00000000000000000000000000000010100000100000001000011000101000000000000000000000000000000000000000111111011111110000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: QLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHPVLPFNDGVYFASTEKSNIIRGWIFGTTLSLLIVNNATNVVIKVCEFQFDPFLCTFEYVSFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKE\nAntibody Sequence: QVKLEESGGGSVQAGGSLRLICTAPGLTHNNCGLDWYRRAPGKEREFVSSISADGTTSYADSVKGRFTISKDKVEDTVYLQMNSLKPEDTAIYSCKTAFPYFGNSCVLDYWGQGTSVTVS", "output": "Paratope: 111110000000000000000010110011000000000000000000000000000000000000000000001000000000000000000000001111111001000000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: QLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFNNCTFEYVSKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSF\nAntibody Sequence: QVKLEESGGGSVQAGGSLRLICTAPGLTHNNCGLDWYRRAPGKEREFVSSISADGTTSYADSVKGRFTISKDKVEDTVYLQMNSLKPEDTAIYSCKTAFPYFGNSCVLDYWGQGTSVTVS", "output": "Paratope: 111110000000000000000011110111000000000000000000000000000000000000000000011000000000000000000000001111111001000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: EMCEIPEMDSHLVEKLGQHLLPWMDRLSLEHLNPSIYVGLRLSSLQAGTKEDLYLHSLKLGYQQCLLGSAFSEDDGDCQGKPSMGQLALYLLALRANCEFVRGHKGDRLVSQLKWFLEDEKRAIGHDHKGHPHTSYYQYGLGILALCLHQKRVHDSVVDKLLYAVEPFHQGHHSVDTAAMAGLAFTCLKRSNFNPGRRQRITMAIRTVREEILKAQTPEGHFGNVYSTPLALQFLMTSPMRGAELGTACLKARVALLASLQDGAFQNALMISQLLPVLNHKTYIDLIFPDCLAPRVMLEPAAETIPQTQEIISVTLQVLSLLPPYRQSISVLAGSTVEDVLKKAHELGGFTYETQASLSGPYLTSVMGKAAGEREFWQLLRDPNTPLLQGIADYRPKDGETIELRLVSW\nAntibody Sequence: LVESGGGLVQPGGSLRLSCAASGSTFSSYAMGWYRQAPGKECELVAAISRAGGSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNAAAEGETNWSLCEEYDYWGKGTRVTVSSHHH", "output": "Paratope: 11000000000000000011111111111010000000000000000001000000000000000000000000000000000000000000111110000011101111110100000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: CVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPGSASSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNH\nAntibody Sequence: AVQLVDSGGGSVQAGGSLRLSCAASGYTYSICTMGWYRQAPGEGLEWVSGINADGSNTHYTDSVKGRFTISRDNAKKTLYLQMNSLKPEDTAIYYCAAHGTYDKYAPCGGFAGTYTYWGQGTQVTVSSSGQA", "output": "Paratope: 111100000000000000000000000000001000101001111110000000000011100000000000000000000000000000000010001111111111001011110111000000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: KDDFAKLEEQFDAKLGIFALDTGTNRTVAYRPDERFAFASTIKALTVGVLLQQKSIEDLNQRITYTRDDLVNYNPITEKHVDTGMTLKELADASLRYSDNAAQNLILKQIGGPESLKKELRKIGDEVTNPERFEPELNEVNPGETQDTSTARALVTSLRAFALEDPGKLPSEKRELLIDWMKRNTTGDALIRAGVPDGWEVADKTGAASYGTRNDIAIIWPPKGDPVVLAVLSSRDKKDAKYDDKLIAEATKVVMKALN\nAntibody Sequence: VQLQESGGGLVQAGGSLRLSCAASGRTFSNDHMGWFRKAPGKEREFVAAITPGTEKTYYADSVKGRFAFSRDNAKNTVYLQMNSLKPEDTAVYYCVATPYYRGSYYAASTYTYWGQGTQVTV", "output": "Paratope: 00000000000000000000000000000000000000000011000000000001010000010000000000000000000000000000000000001111111110000000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: TPSDKPVAHVVANPQAEGQLQWLNRRANALLANGVELRDNQLVVPSEGLYLIYSQVLFKGQGCPSHVLLTHTISRIAVSYQTKVNLLSAIKSPCQRETPEGAEAKPWYEPIYLGGVFQLEKGDRLSAEINRPDYLDFAESGQVYFGIIAL\nAntibody Sequence: QLQESGGGLVQPGGSLRLSCAASGRTFSDHSGYTYTIGWFRQAPGKEREFVARIYWSSGNTYYADSVKGRFAISRDIAKNTVDLTMNNLEPEDTAVYYCAARDGIPTSRSVESYNYWGQGTQVTVSS", "output": "Paratope: 0000000000000000000000000000000011010000000000000000101011110100100000000010110000000000000000000000000011111000010000000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: YFNTNSIASTGYTIINDKHFYFNTDGIMQIGVFKGPDGFEYFAPANTDANNIEGQAIRYQNRFLYLHDNIYYFGNNSKAATGWVTIDGRRYYFEPNTAIGANGYKIIDNKNFYFRNGLPQIGVFKGPNGFEYFAPANTDANNIDGQAIRYQNRFLHLLGNIYYFGNNSKAVTGWQTINGNMYYFMPDTAMAAAGGLFEIDGVIYFFGVDGVKAP\nAntibody Sequence: VKLEESGGGLVQAGGSLRLSCAASERTFSRYPVAWFRQAPGAEREFVAVISSTGTSTYYADSVKGRFTISRDNAKVTVYLQMNNLKREDTAVYFCAVNSQRTRLQDPNEYDYWGQGTQVTVSSH", "output": "Paratope: 0000000000000000000000000000011100000000000001001111101111000000000000000000000000000000000000000000111110000000000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: TGMRTIDGKKYYFNTNTAEAATGWQTIDGKKYYFNTNTSIASTGYTIINDKHFYFNTDGIMQIGVFKGPDGFEYFAPANTDANNIEGQAIRYQNRFLYLHDNIYYFGNNSKAATGWVTIDGRRYYFEPNTAIGANGYKIIDNKNFYFRNGLPQIGVFKGPNGFEYFAPANTDANNIDGQAIRYQNRFLHLLGNIYYFGNNSKAVTGWQTINGNMYYFMPDTAMAAAGGLFEIDGVIYFFGVDGVKAPG\nAntibody Sequence: VKLEESGGGLVQAGGSLRLSCAASERTFSRYPVAWFRQAPGAEREFVAVISSTGTSTYYADSVKGRFTISRDNAKVTVYLQMNNLKREDTAVYFCAVNSQRTRLQDPNEYDYWGQGTQVTVSS", "output": "Paratope: 000000000000000000000000000001110000000000000100111110111100000000000000000000000000000000000000000011111000000000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQT\nAntibody Sequence: PSQVQLVESGGGSVQAGGSLRLSCAASGQIEHIGYLGWFRQAPGKEREGVAALITYTGHTYYADSVKGRFTVSLDNAKNTVYLQMNSLKPEDTALYYCAAAEWGSQSPLTQWFYRYWGQGTQVTVSA", "output": "Paratope: 1110000000000000000000000000001111100000100000100000010110101000000000000000000000000000000000000000011111111001011111000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: GSMNTDERYKLLRSVGEECIQESELRNLIEKKPLIRCYDGFEPSGRMHIAQGIFKAVNVNKCTAAGCEFVFWVADWFALMNDKVGGELEKIRIVGRYLIEVWKAAGMDTDKVLFLWSSEEITSHADTYWRMVLDIGRQNTIARIKKCCTIMGKTEGTLTAAQVLYPLMQCCDIFFLKADICQLGLDQRKVNMLAREYCDLIGRKLKPVILSHHMLAGLRRGQAKMSDPDSAIFMEDTEEDVARKIRQAYCPRVKQSASAITDDGAPVATDDRNPVLDYFQCVVYARPGAVAAIDGTTYATYEDLEQAFVSDEVSEDALKSCLIDEVNALLAPVRQHFASNEEAHELLEAVKSYRKGGATLPLAETALPAAPEKPHACMWMPALLKVPLDVAEGMIKATEDFIAAHPGGTVTVVLPDWSAVASDEITGVEKDISAALQVNCALLKAYGLPNSVKIVTENEVILGNRNDFWVSVIGIARKNLLSHIEELYGGELRNAGQVIAALMRVATALMLSVSHVISTSLDGHINAFAREYTKERIECVQTLEGRIPALHRPGAAPAVLGADDVLYLDDNDMDIRRKIKKAYSAPNEEANPVISVAQHLLAQHGALNIERGEANGGNVSYNTPEALVADCGSGALHPADLKAAVLQLLLDRSAQARALLNGELKKNMTALRNAEKKMAK\nAntibody Sequence: QVQLQESGGGLVLPGGSLRLSCATSGFTFSNSWMYWVRQAPGKGLEWVSRINAGGNTVDYKDSVKGRFSISRDNAKNTLYLQMNSLKPEDTAVYYCARGLNRYAYDSRGQGTQVTVSS", "output": "Paratope: 0000000000000000001000000000011010000000000000100101111111010000011111111111000101000000000000000000111000000000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: NYENLSKLLTRYSTLNTLIKLSADPSAINAARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVLGYATQCGGNANGQESTSSTTIFNNEPGYRSTSITCSLNRYKPGYYGPMSIENFKKLNEAYQILQTALNKGLPALKENNGTIKDVTYSYICYGEGNNNCEIKLADGQKLQQNGGSETTTQTIDGKTVSTTISSKVVDSTAADNTYKQSYTEITNALKDVPDSAQALLAQASTLINTINTACPYFSVTNKSGGPQMEPTRGKLCGFTEEISAIQKMITDAQELVNQTSVINEHEQSTPVGGKPFNPFTDASFAQGMLANASAQAKMLNLAHQVGQTINPDNLTGTFKNFVTGFLATCNNKGSPPGTVTTQTFASGCAYVEQTITNLNNSIAHFGTQEQQIQQAENIADTLVNFGSHH\nAntibody Sequence: VQLQESGGGLVQPGGSLRLSCAASGSIFSGNVMGWYRQAPGKLREWVAAITPQGVPNYADSVKGRFTISRDNAKNMLYLQMSSLKPEDTALYYCNRLPNYRSWGQGTQVTVSSH", "output": "Paratope: 000000000000000000000000000011110001010011111100101110101000000000000000000000000000000000000001111000100000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: TEVVMENVTAFWETPVLKDINFKIERGQLLAVAGSTGAGKTSLLMMIMGELEPSEGKIKHSGRISFCSQFSWIMPGTIKENIIFGVSYDEYRYRSVIKACQLEEDISKFAEKDNIVLGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQNL\nAntibody Sequence: QVQLQESGGGLVQAGGSLRLSCTASGRAFSWYVMGWFRQAPGKEREFVATVSGNGSRRDYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAASSTYYYTDPEKYDYWGQGTQVTVSS", "output": "Paratope: 100000000000000000000000001101110000000000000000000111111000000000000000000000000000000000000000000111110000000100000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: TTEVVMENVTAFWEEGGTPVLKDINFKIERGQLLAVAGSTGAGKTSLLMMIMGELEPSEGKIKHSGRISFCSQFSWIMPGTIKENIIFGVSYDEYRYRSVIKACQLEEDISKFAEKDNIVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQNL\nAntibody Sequence: QVQLQESGGGLVQAGSSLRLACAATGSIRSINNMGWYRQAPGKQRGMVAIITRVGNTDYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTATYYCHAEITEQSRPFYLTDDYWGQGTQVTVSSAAA", "output": "Paratope: 000000000000000000000000000000001000100000001110010100010110100000000000000000000000000000000001010000011111111010000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: TEVVMENVTAFWEEGGTPVLKDINFKIERGQLLAVAGSTGAGKTSLLMMIMGELEPSEGKIKHSGRISFCSQFSWIMPGTIKENIIFGVSYDEYRYRSVIKACQLEEDISKFAEKDNIVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQNL\nAntibody Sequence: QVQLQESGGGLVQAGGSLRLSCTASGRAFSWYVMGWFRQAPGKEREFVATVSGNGSRRDYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAASSTYYYTDPEKYDYWGQGTQVTVSS", "output": "Paratope: 100000000000000000000000001101110000000000000000000111111000000000000000000000000000000000000000000111010000000000000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: TEVVMENVTAFWEEGGTPVLKDINFKIERGQLLAVAGSTGAGKTSLLMMIMGELEPSEGKIKHSGRISFCSQFSWIMPGTIKENIIFGVSYDEYRYRSVIKACQLEEDISKFAEKDNIVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQNL\nAntibody Sequence: QVQLQESGGGLVQAGSSLRLACAATGSIRSINNMGWYRQAPGKQRGMVAIITRVGNTDYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTATYYCHAEITEQSRPFYLTDDYWGQGTQVTVSSA", "output": "Paratope: 0000000000000000000000000000000010001000000011100101000101101000000000000000000000000000000000010100000111111110100000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: EVVMENVTAFWEEGGTPVLKDINFKIERGQLLAVAGSTGAGKTSLLMMIMGELEPSEGKIKHSGRISFCSQFSWIMPGTIKENIIFGVSYDEYRYRSVIKACQLEEDISKFAEKDNIVLGGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQNL\nAntibody Sequence: QVQLQESGGGLVQAGSSLRLACAATGSIRSINNMGWYRQAPGKQRGMVAIITRVGNTDYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTATYYCHAEITEQSRPFYLTDDYWGQGTQVTVSS", "output": "Paratope: 000000000000000000000000000000001000100000001110010100010110100100000000000000000000000000000001010000011111111010000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: DTQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKEFLQYSEGTLSREAIQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVGTLQPKFKRFLRHPLPKTLEQLIQRGMEVQDGL\nAntibody Sequence: EVQLLESGGGLVQAGDSLRLSCAASGRTFSAYAMGWFRQAPGKEREFVAAISWSGNSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCAARKPMYRVDISKGQNYDYWGQGTQVTVS", "output": "Paratope: 00000000000000000000000000110111100000000000001000011000101111000000000000000000000000000000000000111111111110000010000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: IQVTQPSVVLASSHGVASFPCEYSPSHNTDEVRVTVLRQTNDQMTEVCATTFTEKNTVGFLDYPFCSGTFNESRVNLTIQGLRAVDTGLYLCKVELMYPPPYFVGMGNGTQIYVID\nAntibody Sequence: VQLVESGGGLAQPGGSLRLSCAASGSTISSVAVGWYRQTPGNQREWVATSSTSSTTATYADSVKGRFTISRDNAKNTIYLQMNSLKPEDTAVYYCKTGLTNWGRGTQVTVS", "output": "Paratope: 000000000000000000000000000001111101000000000100110101100100000000000000000000000000000000000001111101000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: IQVTQPSVVLASSHGVASFPCEYSPSHNTDEVRVTVLRQTNDQMTEVCATTFTEKNTVGFLDYPFCSGTFNESRVNLTIQGLRAVDTGLYLCKVELMYPPPYFVGMGNGTQIYVI\nAntibody Sequence: VQLVESGGGLAQPGGSLRLSCAASGSTISSVAVGWYRQTPGNQREWVATSSTSSTTATYADSVKGRFTISRDNAKNTIYLQMNSLKPEDTAVYYCKTGLTNWGRGTQVTVS", "output": "Paratope: 000000000000000000000000000001111101000000100100100101100100000000000000000000000000000000000001111101000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: SKPFTLPILTLGELTNSRFPLPIDVLYTNPNESAIVQCQNGRCTLDGELQGTTQLLPTGICAFRGKVTQQVHRTHWNMTVTNLNGTPFDPTEDVPAPLGTPDFSGQIYGVISQRNTLPANRAHEAVIATYSPKFTPKLGNIQFSTWETQDVSSGQPTKFTPVGLASVDANSHFDQWTLPSYSGALTLNMNLAPSVAPVFPGECLLFFRSFIPLKGGYGNPAIDCLMPQEWVQHLYQESAPSLSDVALVRYVNPETGRTLFEAKLHRNGFLTVARNSAGPVVAPTNGYFRFDSWVNQFYTLAPM\nAntibody Sequence: DVQLVESGGGLVQPGGSLRLSCAASESILSFNHMAWYRQGPGEQRELVAVITREGSTDYADSVKGRFTISRDNAKNMVYLLMSNLRPEDTAVYYCNRGISNPWGQGTQVTVS", "output": "Paratope: 1100000000000000000000000000111110101000000011111101100001110000000000000000000000000000000000001111000000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: KPFTLPILTLGELTNSRFPLPIDVLYTNPNESAIVQCQNGRCTLDGELQGTTQLLPTGICAFRGKVTQQVQDEHRGTHWNMTVTNLNGTPFDPTEDVPAPLGTPDFSGQIYGVISQRNTNTNLPANRAHEAVIATYSPKFTPKLGNIQFSTWETQDVSSGQPTKFTPVGLASVDANSHFDQWTLPSYSGTLNMNLAPSVAPVFPGECLLFFRSFIPLKGGYGNPAIDCLMPQEWVQHLYQESAPSLSDVALVRYVNPETGRTLFEAKLHRNGFLTVARNSAGPVVAPTNGYFRFDSWVNQFYTLAPM\nAntibody Sequence: DVQLVESGGGLVQPGGSLRLSCAASESILSFNHMAWYRQGPGEQRELVAVITREGSTDYADSVKGRFTISRDNAKNMVYLLMSNLRPEDTAVYYCNRGISNPWGQGTQVTVSSH", "output": "Paratope: 110000000000000000000000010011111010100000001111110110000111000000000000000000000000000000000000111111000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: LEEKKVCNGIGIGEFKDSLSINATNIKHFKNCTSISGDLHILPVAFRGDSFTHTPPLDPQELDILKTVKEITGFLLIQAWPENRTDLHAFENLEIIRGRTKQHGQFSLAVVSLNITSLGLRSLKEISDGDVIISGNKNLCYANTINWKKLFGTSGQKTKIISNRGENSCKATGQVCHALCSPEGCWGPEPRDCVSCR\nAntibody Sequence: QVKLEESGGGSVQTGGSLRLTCAASGRTSRSYGMGWFRQAPGKEREFVSGISWRGDSTGYADSVKGRFTISRDNAKNTVDLQMNSLKPEDTAIYYCAAAAGSAWYGTLYEYDYWGQGTQVTV", "output": "Paratope: 10100000000000000000000000001111000000100000000000001000000000000000000000000000000000000000000000111000100111111100000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: MVDLPVIQPRLCTHARWPAPVYGLLVDPSLPSNPQWQNGRVHVDGTLLGTTPISGSWVSCFAAEAAYKFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLVDGRVRAVPRSIYGFQDTIPEYNDGLLVPLAPPIGPFLPGEVLLRFRTYMRQIDTADAAAEAIDCALPQEFVSWFASNAFTVQSEALLLRYRNTLTGQLLFECKLYNEGYIALSYSGSGPLTFPTDGIFEVVSWVPRLYQLASV\nAntibody Sequence: QVQLQESGGGLVQAGGSLRLSCAKSGRTFRAYAMGWFRQAPGKEREFVAAIDWSAAITNYADSVKGRFTILRDKGMNTAYLQMNSLEPEDTAVYYCAATYSTIAPRTSYDFWGQGTQVTVSS", "output": "Paratope: 00000000000000000000000101111111000000000000000000011101100000000000000001111000000000000000000000011110000001000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: PFTLPNLPLSSLSNSRAPLPISSIGISPDNVQSVQFQNGRCTLDGRLVGTTPVSLSHVAKIRGTSNGTVINLTELDGTPFHPFEGPAPIGFPDLGGCDWHINMTQFGHSSQTQYDVDTTPDTFVPHLGSIQANGIGSGNYVGVLSWISPPSHPSGSQVDLWKIPNYGSSITEATHLAPSVYPPGFGEVLVFFMSKMPGPGAYNLPCLLPQEYISHLASEQAPTVGEAALLHYVDPDTGRNLGEFKAYPDGFLTCVPNSSGPQQLPINGVFVFVSWVSRFYQLKPV\nAntibody Sequence: QVQLQESGGGLVQAGGSLRLSCAASGRMFSINSMGWYRQAPGKERELVATISEAGTTTYADSVRGRFTIARDNAKNTVYLQMNSLNPEDTAVYYCNAYIQLDSTIWFRAYWGQGTQVTVSS", "output": "Paratope: 1100000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000101111111111110000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: AINAARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVLGYATQCGGNANGQESTSSTTIFNNEPGYRSTSITCSLNRYKPGYYGPMSIENFKKLNEAYQILQTALNKGLPALKENNGTVSVTYTYTCSGEGNDNCSKKATGVSDQNGGTKTKTQTIDGKTVTTTISSKVVDSQAKGNTTRVSYTEITNKLDGVPDSAQALLAQASTLINTINTACPYFSVTNKSGGPQMEPTRGKLCGFTEEISAIQKMITDAQELVNQTSVINEHEQSFAQGMLANASAQAKMLNLAHQVGQTINPDNLTGTFKNFVTGFLATCNNKSSPPGTVTTQTFASGCAYVEQTITNLNNSIAHFGTQEQQIQQAENIADTLVN\nAntibody Sequence: QVQLQESGGGLVQPGGSLRLSCAASGSIYSLIAMGWYRQAPGKEHELVATISSGSTTYYADSVKGRFTISRDNAKNTLYLQMNSLKPEDTAMYYCAAYSDRLTDCSNCEADYWGQGTQVTV", "output": "Paratope: 1110100000000000000000000111110000000000000010000000000000000000000000000000000000000000000000000011111100011111101000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: QVQLVESGGGLVQAGGSLRLSCTASGRTGTIYSMAWFRQAPGKEREFLATVGWSSGITYYMDSVKGRFTISRDKGKNTVYLQMDSLKPEDTAVYYCTATRAYSVGYDYWGQGTQVTV\nAntibody Sequence: QVQLVESGGGLVQAGGSLRLSCTASGRTGTIYSMAWFRQAPGKEREFLATVGWSSGITYYMDSVKGRFTISRDKGKNTVYLQMDSLKPEDTAVYYCTATRAYSVGYDYWGQGTQVTVSS", "output": "Paratope: 00000000000000000000000000000001100011000001111001110010111010100000000000000000000000001000000000001111110010000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: SVAPTMMNVLYAGIDNPINIAVPGVAQQNVSATINNGTLTRRGNLWIARPTKVGSEAIISVTAQSGGRTIQMAKTTLRVRALPDPLPYIEYKDVQGNTKRFKGGRLGKREILAAGGIKAALDDDLLEVNYTVVKFQLVFYDSMGNSIPEVSDGASFSERQKRQIQNLGKGKRFYVTEVIARGPDGIERKIPAIEVIVN\nAntibody Sequence: QVQLVESGGGLVQAGGSLRLSCAASGRTFSSYVMGWFRQAPGKEREFVTAISWSGGSIHYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYTCVAGFAGYGSFTSRSARDSDKYDYWGQGTKVTVS", "output": "Paratope: 000000000000000000000000000001110000000000000000000111111010000000000000010000000000000000000000000111111110000000000000000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: FQQQAAWDVHLADSVARMGLAHPWGVVAAEFDDSLLPLSRLNATRLIVRFPDGTLIDTERADNLPPVCDLSTVSDRSLVDIVLALPLLNANGGNLDNGSESERPRRWKSERAVLRHNLTLRMAHQENAAWLTCPVTRLVRDAQGQWCRDPRFIPPLLTLSASPSLMTELLELLHHLQARRQRLMSMRRENNADFAVADVSLFWLLNALNSAEPVLKELLDMPYRHPELLYRELARLAGSLLTFSLEHNVDAVPAYHHETPENVFPPLLSLLNRLLEASLPSRVVFIELKQKGVMWEGALHDARLREGADFWLSVRSSMPGHELQTKFPQLCKAGSPDDVSEVVNVALSGVIIRPVTHVLRLENQYFALDLSTDAARAMLDAGRCTFYTPASLGDVKLELFAVLRT\nAntibody Sequence: QVQLVESGGGLVQAGGTLKLSCAASGSISGIVVMAWYRQAPGKQRELVASITSGGTTNYADSVKGRFTISKDNAENTLYLRMNSLKPEDTAVYYCKAFFRRDYVGYDYWGQGTQVTVSS", "output": "Paratope: 00000000000000000000000000000001101010000000001001011111000000000000000000000000000000000000000101010011111100000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: FQQQAAWDVHLADSVARMGLAHPWGVVAAEFDDSLLPLSRLNATRLIVRFPDGTLIDTERADNLPPVCDLSTVSDRSLVDIVLALPLLNANGGNLDNGSESERPRRWKSEAVLRHNLTLRMAHQENAAWLTCPVTRLVRDAQGQWCRDPRFIPPLLTLSASPSLMTELLELLHHLQARRQRLMSMRRENNARLADFAVADVSLFWLLNALNSAEPVLKELLDMPYRHPELLYRELARLAGSLLTFSLEHNVDAVPAYHHETPENVFPPLLSLLNRLLEASLP\nAntibody Sequence: QVQLVESGGGLVQAGGTLKLSCAASGSISGIVVMAWYRQAPGKQRELVASITSGGTTNYADSVKGRFTISKDNAENTLYLRMNSLKPEDTAVYYCKAFFRRDYVGYDYWGQGTQVTVSSHHH", "output": "Paratope: 00000000000000000000000000000001101010000000001001011111000000000000000000000000000000000000000101010011111100000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYWMESEFRVYSSANNCTFEYVSQPFLFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELD\nAntibody Sequence: QVQLVETGGGFVQPGGSLRLSCAASGVTLDYYAIGWFRQAPGKEREGVSCIGSSDGRTYYSDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCALTVGTYYSGNYHYTCSDDMDYWGKGTQVTVSS", "output": "Paratope: 000000000000000000000000000111110000000000000010010000001011100000000000000000000000000000000000001111110000111111001000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP\nAntibody Sequence: QVQLVESGGGLVQAGGSLRLSCAASGFPVYRDRMAWYRQAPGKEREWVAAIYSAGQQTRYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNVKDVGHHYEYYDYWGQGTQVTVS", "output": "Paratope: 000000000000000000000000011101111000100000000010010111110011110000000000000000000000000000000000001111111010000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: SRRVEVLLTQLPAYNRLKTPYEEELIETAKKMTAPGKGLLAADESTGSCSKRFAGIGLSNTAEHRRQYRALMLECAGFEQYISGVILHDETVYQRASTGETFPQLLRRRGVVPGIKTDCGLEPLVEGADGEQMTAGLDGYVKRAKKYYAVGCRFCKWRNVYKIQNGTVSEAVVRFNAETLARYAVLSQLCGLVPIVEPEVMIDGTHDIETCQRVSQHVWAEVVSALHRHGVVWEGCLLKPNMVVPGAESGQTATAEQVAEYTVKTLARVLPPALPGVTFLSGGLSEVMASEYLNAMNNSPLPRPWKLTFSYARALQSSAIKAWGGKSSGVAAGRRAFMHRAKMNSLAQLGRYNRGDDDKD\nAntibody Sequence: VQLQESGGGLVQPGGSLRLSCAASETALTYYAIGWFRQAPGKEREGVSCISRINSGSGARTDYADSVKGRFTISRDDAKNTVTLQMNSLEPEDTARYYCALDTTDRYDSANGRYYCTISSDTYDYWGQGTQVTVSSHH", "output": "Paratope: 100000000000000000000000111001100000000000000000000100000000000000000000000000000000000000000000000001111011110001000000000110000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: NITEEFYQSTCSAVSKGYLSALRTGWYTSVITIELSNIKEIKCNGTDAKVKLIKQELDKYKNAVTELQLLMQSFLGFLLGVGSAIASGVAVSKVLHLEGEVNKIKSALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKQLLPIVNKQSCSIPNIETVIEFQQKNNRLLEITREFSVNAGVTTPVSTYMLTNSELLSLINDMPITNDQKKLMSNNVQIVRQQSYSIMSIIKEEVLAYVVQLPLYGVIDTPCWKLHTSPLCTTNTKEGSNICLTRTDRGWYCDNAGSVSFFPQAETCKVQSNRVFCDTMNSLTLPSEVNLCNVDIFNPKYDCKIMTSKTDVSSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKQEGKSLYVKGEPIINFYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDELLSAIGGYIPEAPRDGQAYVRKDGEWVLLSTFLGSLEVLFQ\nAntibody Sequence: QVQLQESGGGLVQAGGSLRLSCAASGQTFSGYVTGWFRQAPGKEREFVALIAWSGGRLYYADSVQGRFTISRDNAETTVYLQMNSLKPEDTAVYYCAAKRGGAVTAAEWYDYWGQGTQVTVSS", "output": "Paratope: 100000000000000000000000001001111000000000000000000111001000000000000000000100000000000000000000001111110101111100000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL\nAntibody Sequence: VQLVESGGGSVQAGESLRLSCAASGVTYKNYCIGWFRQAPGKDREGVVFINSDGGITYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTASYYCAAGYRNYGQCATRYWGQGTQVTVS", "output": "Paratope: 00000000000000000000000000011100000100000011010010000000001000000000000000000000000000000000000000111111111111000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: EVQLQASGGGFVQPGGSLRLSCAASGSTSRQYDMGWFRQAPGKEREFVSAISSNQDQPPYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAFKQHHANGAYWGQGTQVTVSS\nAntibody Sequence: SEVQLQASGGGFVQPGGSLRLSCAASGTTYGQTNMGWFRQAPGKEREFVSAISGLQGRDLYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAFHDFLRMWEYWGQGTQVTVSS", "output": "Paratope: 000000000000000000000000000000000000000000001111101100000111111100000000000000000000000000000000000000111111110000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: KQYPIINFTTAGATVQSYTNFIRAVRGRLTTGADVRHEIPVLPNRVGLPINQRFILVELSNHAELSVTLALDVTNAYVVGYRAGNSAYFFHPDNQEDAEAITHLFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTGGTQLPTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITLENSWGRLSTAIQESNQGAFASPIQLQRRNGSKFSVYDVSILIPIIALMVYRCAP\nAntibody Sequence: VQLVESGGGLVQPGGSLRLSCAASGFTLDDYAIGWFRQVPGKEREGVACVKDGSTYYADSVKGRFTISRDNGAVYLQMNSLKPEDTAVYYCASRPCFLGVPLIDFGSWGQGTQVTV", "output": "Paratope: 11100000000000000000000001001111000000000000000000110000000000000000100000000000000000000000111111001011111000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: AAGAVVGGLGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAY\nAntibody Sequence: AVQLQESGGGLVQPGGSLRLSCAASGRTFSSYNMGWFRQAPGKGREFVASITSSGDKSDYTDSVKGRFTISRDNAKNTMYLQMNNLKPEDTATYYCARGLGIYIIRARGGYDHWGQGTQVTVS", "output": "Paratope: 000000000000000000000000000000000000000000000110000000000010110000000000000000000000000000000000000111111111110000000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: FPFVNKQFNYKDPVNGVDIAYIKIPNMQPVKAFKIHNKIWVIPERDTFTNPEEGDLNPPPEAKQVPVSYYDSTYLSTDNEKDNYLKGVTKLFERIYSTDLGRMLLTSIVRGIPFWGGSTIDTELKVIDTNCINVIQPDGSYRSEELNLVIIGPSADIIQFECKSFGHEVLNLTRNGYGSTQYIRFSPDFTFGFEESLEAGKFATDPAVTLAHELIHAGHRLYGIAINPNRVFKVNTLEVSFEELRTFGGHDAKFIDSLQENEFRLYYYNKFKDIASTLNKAKSIVGTTASLQYMKNVFKEKYLLSEDTSGKFSVDKLKFDKLYKMLTEIYTEDNFVKFFKVLNRKTYLNFDKAVFKINIVPKVNYTIYDGFNLRNTNLAANFNGQNTEINNMNFTKLKNFTGLFEFYKLLCVRGIITSK\nAntibody Sequence: SQVQLVETGGGLVQAGDSLTLSCAATGRTLDYYALGWFRQVPGNKREFVAAINWLGGSTYYADSVRGRFTLSRDNSKSTLYLNMNNLIPDDTAVYYCAADFSIAYSGTYPPAYAEYDYDYWGQGTQVTV", "output": "Paratope: 110000000000000000000000000000011000000000000001000000000001001000000000000000000000000000000000000111111101111110011111000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: PFVNKQFNYKDPVNGVDIAYIKIPNMQPVKAFKIHNKIWVIPERDTFTNPEEGDLNPPPEKQVPVSYYDSTYLSTDNEKDNYLKGVTKLFERIYSTDLGRMLLTSIVRGIPFWGGSTIDTELKVIDTNCINVIQPDGSYRSEELNLVIIGPSADIIQFECKSFGHEVLNLTRNGYGSTQYIRFSPDFTFGFEESLEVDTNPLLGFATDPAVTLAHELIHAGHRLYGIAINPNRVFKVNLEVSFEELRTFGGHDAKFIDSLQENEFRLYYYNKFKDIASTLNKAKSIVGTTASLQYMKNVFKEKYLLSEDTSGKFSVDKLKFDKLYKMLTEIYTEDNFVKFFKVLNRKTYLNFDKAVFKINIVPKVNYTIYDGFNLRNTNLAANFNGQNTEINNMNFTKLKNFTGLFEFYKLLCVRGIITSK\nAntibody Sequence: QLVETGGGLVPGGSLRLACVASESVFEMYTVAWYRQAPGKQRELVAGITDEGRTNYADFVKGRFTISRDNSKKTVHLQMDNLNPEDTAVYYCKLEHDLGYYDYWGQGTQVTV", "output": "Paratope: 0000000000000000000000111011100000000000000000000100000000000000000000001000000000000000000000011111101000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFEL\nAntibody Sequence: QVQLQESGGGLVQPGGSLRLSCAVSGFTLDYYAIGWFRQAPGKEREGVSCISSSGGNTKYADSVKGRFTASRDNAKNTFYLQMNSLKPEDTAVYYCAAIAATYYSGSYYFQCPHDGMDYWGKGTQVTVSS", "output": "Paratope: 1000000000000000000000000011111100000000000000111100000010111100000000000000000000000000000000000011111100011111111111100000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: NDDVDQSLIIAARNIVRRATVSTDPLASLLEMCHSTQIGGIRMVDILRQNPTEEQAVDICKAAMGLRISSSFSFGGFTFKRTSGSSVKKEEEVLTGNLQTLKIRVHEGYEEFTMVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWGIEPIDNVMGMIGILPDMTPSTEMSLRGVRVSKMGVDESTERVVVSIDRFLRVRDQRGNVLLSPEEVSETQGTERLTITYS\nAntibody Sequence: QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYYMSWVRQAPGEGREWVSSINRDGSNTYYADSVKGRFTIARDNVKNTLYLLMDSLKSDDTAVYYCTKGSNWPYDNWGQGTQVTVSSHHH", "output": "Paratope: 000000000000000000000000000000001010100000111110010000000010010000000000000000000000000000000000011111111010000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDNGMNAWVAWRNRCKGTDVQAWIRGCR\nAntibody Sequence: VQLLESGGGLVQPGGSLRLSCAASGFRFDAEDMGWVRQAPGKGLEWVSSIYGPSGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKYTSPPQNHGFDYWGQGTLVTVS", "output": "Paratope: 00000000000000000000000000000001001100000001010010100000010000000000000000000000000000000000000001111111111100000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: KVYGRCELAAAMKRLGLDNYRGYSLGNWVCAAKFESNFNTHATNRNTDGSTDYGILQINSRWWCNDGRTPGSKNLCNIPCSALLSSDITASVNCAKKIASGGNGMNAWVAWRNRCKGTDVHAWIRGCRL\nAntibody Sequence: DVQLQASGGGSVQAGGSLRLSCAASGYTIGPYCMGWFRQAPGKEREGVAAINMGGGITYYADSVKGRFTISQDNAKNTVYLLMNSLEPEDTAIYYCAADSTIYASYYECGHGLSTGGYGYDSWGQGTQVTVSS", "output": "Paratope: 0000000000000000000000000000111100000000000000000000111010000000000000000000000000000000000000000001111111110010000001000000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: NQVRPKLPLLKILHAAGAQGEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVKDPSPLYDMLRKNLVTL\nAntibody Sequence: EVQLLESGGGLVQPGGSLRLSCAASGFTFEEYAMLWVRQAPGKGLEWVSGINARGYTTYYADSVKGRFTISRDNSKNTLYLQMNSLRTEDTAVYYCAKPWYPFMASKGSEFDYWGQGTLVTVSSA", "output": "Paratope: 00000000000000000000000000100011000000000000000000000000000000000000000000000000000000000000000001011111010001111100000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: AKVMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVYLRVYREAKEQIRKIDRASAMKEHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLAF\nAntibody Sequence: QVQLQESGGGLVQAGGSLRLSCAASGSIFSINTMGWYRQAPGKQRELVAAIHSGGSTNYANSVKGRFTISRDNAANTVYLQMNSLKPEDTAVYYCNVKDYGAVLYEYDYWGQGTQVTVSS", "output": "Paratope: 010000000000000000000000001111101000000000000000011111011100000000000000110000000000000000000000001111111110100000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPK\nAntibody Sequence: VQLVESGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGSTHFADSVKRFTISRDNAKNTVYLQMNSLIPEDTAVYYCAAQSGSYYWCGSDWHEYEYWGQGTQVTV", "output": "Paratope: 0000000000000000000000000000100000000000000000000010000000000000000000000000000000000000000000011111110001011010000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: DGIKRIQDDCPKAGRHNYIFVMIPTLYSIIFVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGNYLCKIASASVSFNLYASVFLLTCLSIDRYLAIVHPMKSRLRRTMLVAKVTCIIIWLLAGLASLPAIIHRNVFFIENTNITVCAFHYESTLPIGLGLTKNILGFLFPFLIILTSYTLIWKALKKAYDLEDNRNDDIFKIIMAIVLFFFFSWIPHQIFTFLDVLIQLGIIRDCRIADIVDTAMPITICIAYFNNCLNPLFYGFLGKKFKRYFLQLL\nAntibody Sequence: QVQLQESGGGLVQAGGSLRLSCAASGNIFDVDIMGWYRQAPGKERELVASITDGGSTDYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAVAYPDIPTYFDYDSDNFYWGQGTQVTVS", "output": "Paratope: 00000000000000000000000000000000111110000000111001000000010000000000000000000000000000000000000101010111111111110101000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: NPEKVKVWYERSLVLQKEADSLCTFIDDLKLAIARESDGKDAKVNDIRRKDNLDASSVVMLNPINGKGSTLRKEVDKFRELVATLMTDKAKLKLIEQALNTESGTKGKSWESSLFENMPTVAAITLLTKLQSDVRYAQGEVLADLVK\nAntibody Sequence: DVQLVESGGGLVQAGGSLRVSCAASGRTFSSYSMGWFRQAPGKEREFVAAISRSDNSTYYADSVKGRFTISRDSAKNTVYLQMNSLKPEDTAVYYCAATPYGSRYYLRELREYDYWGQGTQVTVS", "output": "Paratope: 00000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000011111110010110100000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: ELSQERTARLNELQRALVMMDSDFRQIALRQTRTNGESKKLLHWADYLLDSDNKGIMFARLGWHNPQQQFPRGEVTKVGYRIKDERLERVWWRYPDTPAGQEGVVTPLLSDVEELNVRFYDGKQWINEWSNELTLPAAISVELTLKDYGKIARTYLTPEG\nAntibody Sequence: VQLQESGGGLVQPGGSLRLSCAASGFAFSGYAMSWVRQAPGKGLEWVSGINRDGSTSYTAPVKGRFTISRDNAKNILYLQMNSLRPEDTAVYYCAKWLGGRDWYDRGQGTQVTVS", "output": "Paratope: 0000000000000000000000000010011100000000000111000011000000000000000000000000000000000000000000001101111101000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: MPKINSFNYNDPVNDRTILYIKPGGCQEFYKSFNIMKNIWIIPERNVIGTTPQDFHPPTSLKNGDSSYYDPNYLQSDEEKDRFLKIVTKIFNRINNNLSGGILLEELSKANPYLGNDNTPDNQFHIGDASAVEIKFSNGSQDILLPNVIIMGAEPDLFETNSSNISLRNNYMPSNHGFGSIAIVTFSPEYSFRFNDNSMNEFIQDPALTLMHELIHSLHGLYGAKGITTKYTITQKQNPLITNIRGTNIEEFLTFGGTDLNIITSAQSNDIYTNLLADYKKIASKLSKVQVSNPLLNPYKDVFEAKYGLDKDASGIYSVNINKFNDIFKKLYSFTEFDLATKFQVKCRQTYIGQYKYFKLSNLLNDSIYNISEGYNINNLKVNFRGQNANLNPRIITPITGRGLVKKIIRFCKNIVSVKGIRKSICIEINNGELFFVASENSYNDDNINTPKEIDDTVYIPKYDSNGTSDIEQHDVNELNVFFYLDAQKVPEGENNVNLTSSIDTALLEQPKIYTFFSSEFINNVNKPVQAALFVSWIQQVLVDFTTEANQKSTVDKIADISIVVPYIGLALNIGNEAQKGNFKDALELLGAGILLEFEPELLIPTILVFTIKSFLGSSDNKNKVIKAINNALKERDEKWKEVYSFIVSNWMTKINTQFNKRKEQMYQALQNQVNAIKTIIESKYNSYTLEEKNELTNKYDIKQIENELNQKVSIAMNNIDRFLTESSISYLMKLINEVKINKLREYDENVKTYLLNYIIQHGSILGESQQELNSMVTDTLNNSIPFKLSSYT\nAntibody Sequence: VQLVETGGGLVQAGGSLRLSCAASGRSYAMGWFRQGPGKEREFVATISWSSTNTWYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAASHRFSDYPMRSEDGMDYWGKGTLVTVSS", "output": "Paratope: 00000000000000000000000000010000000000000000000111011110000000000000000000000000000000000000001111111111000000000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: KTRPFTLPNLPLSSLSNSRAPLPISSIGISPDNVQSVQFQNGRCTLDGRLVGTTPVSLSHVAKIRGTSNGTVINLTELDGTPFHPFEGPAPIGFPDLGGCDWHINMTQFGHSSQTQYDVDTTPDTFVPHLGSIQANGIGSGNYVGVLSWISPPSHPSGSQVDLWKIPNYGSTHLAPSVYPPGFGEVLVFFMSKMPGPGAYNLPCLLPQEYISHLASEQAPTVGEAALLHYVDPDTGRNLGEFKAYPDGFLTCVPNGPQQLPINGVFVFVSWVSRFYQLKPV\nAntibody Sequence: QVQLQESGGGLVQAGGSLRLSCAVSGRTFSNYYSGWFRQAKEREFLASIRWSDSTTNYADSVKGRFTISRDTAKNTVYLQMNSLKLEDTAVYHCAARRLATYDYWGQGTQVTVSS", "output": "Paratope: 1000000000000000000000011111111100000000000000000111100000000000000001010010000000000000000000000110101100000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: SQFTCFYNSRANISCVWSQDGALQDTSCQVHAWPDRRRWNQTCELLPVSQASWACNLILGAPDSQLTTVDIVTLRVLCREGVRWRVMAIQDFKPFENLRLMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVPLQGEFTTWSPWSQPLAFRTKPAA\nAntibody Sequence: VQLQESGGGSVQAGGSLRLSCAASSYTISSVCMGWFRQAPGKEREGVAGIAPDGSTGYGDSVKGRFTISDNAKNTLYLQMNSLKPEDTAMYYCAAASPGRCFLPRTALEPALYYNWGQGTQVTVSS", "output": "Paratope: 000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000011111101100101101000000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: PVSSLTMLNDTLHNIRTTNQALKKELSQKTLTKTSLEEIALHSSQISMDVNKSAQLLDILSRNEYPINKDARELLHSAPKEAELMISHRELWAKIANSINDINEQYLKVYEHAVSSYTQMYQDFSAVLSSLAGWISPGNSVKLQVNSLKKALEELKEKYKDKPLYPANNTVSQEQANKWLTELGGTIGKVSQKNGGYVVSINMTPIDNMLKSLDNLGGNGEVVLDNAKYQAWNAGFSAEDETMKNNLQTLVQKYSNANSIFDNLVKVLSSTISSS\nAntibody Sequence: QVQLAESGGGLVQPGGSLRLSCSASGGVFIIYNMGWYRQAPGKQRELVASIDSYSGSITNYADSVKGRFTISRDNVEKRVYLEMNNLKPEDTAVYYCNANLRTNNYWGQGTQVTVS", "output": "Paratope: 00000000000000000000000000011111100000000000000000011111111000000000000000110100000000000000000000001100000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: SPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQG\nAntibody Sequence: AQVQLVESGGGLVQAGGSLRLSCAASGSFFMSNVMAWYRQAPGKARELIAAIRGGDMSTVYDDSVKGRFTITRDDDKNILYLQMNDLKPEDTAMYYCKASGSSWGQGTQVTVSS", "output": "Paratope: 000000000000000000000000000000001111010000001111001110000111111001000000000000000000000000000000011111010000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPK\nAntibody Sequence: QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCAGFSATRSLLSDYATWPYDYWGQGTQVTVSSKHHHHHH", "output": "Paratope: 00000000000000000000000000100010000000000000000000010110100000000000000000000000000000000000000000011111110100010010000000000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: VHHPPSYVAHLASDFGVRVFQQVAQASKDRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAMGFKIDDKGMAPALRHLYKELMKDEISTTDAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSEVERARFIINDWVKTHTKGMISNLLGKGAVDQLTRLVLVNALYFNGQFKTPFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFTTPDGHYYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGNMTRLPRLLVLPKFSLETEVDLRKPLENLGMTDMFRQFQADFTSLSDQEPLHVAQALQKVKIEVNESGTVPEEIIMDRPFLFVVRHNPTGTVLFMGQVMEP\nAntibody Sequence: VQLVESGGGLVQAGGSLRLSCAASGFTFDDYSIAWFRQAPGKEREGVSCISSSDGSAYYADSVKGRFTISSDNAKNTVYLQMNSLKPEDTAVYYCAAVWARVCRNPYDYWGQGTQVTVS", "output": "Paratope: 00000000000000000000000000000000011100000011111110101100011110010000000000000000000000000000000000001111111000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: SKPFTLPILTLGELTNSRFPLPIDVLYTNPNESAIVQCQNGRCTLDGELQGTTQLLPTGICAFRGKVTQQVGTHWNMTVTNLNGTPFDPTEDVPAPLGTPDFSGQIYGVISQRNTLPANRAHEAVIATYSPKFTPKLGNIQFSTWETQDVSSGQPTKFTPVGLASVDANSHFDQWTLPSYSGALTLNMNLAPSVAPVFPGECLLFFRSFIPLKGGYGNPAIDCLMPQEWVQHLYQESAPSLSDVALVRYVNPETGRTLFEAKLHRNGFLTVARNSAGPVVAPTNGYFRFDSWVNQFYTLAPM\nAntibody Sequence: DVQLVESGGGLVQPGGSLRLSCAASGSIFSIYAMGWYRQAPGKQRELVASISSGGGTNYADSVKGRFTISGDNAKNTVYLQMNSLKPEDTAVYYCKREDYSAYAPPSGSRGRGTQVTVSS", "output": "Paratope: 000000000000000000000000000000111110100000000010010111111100000000000000000000000000000000000001110111111100000000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: KSWSGELGGGIILSLRKKGTTVEYSIGGEISSSILANSNLVNRSVPNEFCPRNRCSLVGHMVGGWNAFHIDIPSSGVCQWFGPTASSGTPRGTGTYPID\nAntibody Sequence: VQLVESGGGLVQAGDSLRLSCAVSGRSNVIGWFRQAPGKEREFVAAISWSTGSTYYGRSMKGRCAASRDNAKNTVALQLNSLKPEDTAVYYCAATLDWGKTLSDEYDYWGQGTQVTV", "output": "Paratope: 000000000000000000000000000000000000000000100000000000111110000000000000000000000000000000000000011111001000000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: QYPIINFTTAGATVQSYTNFIRAVRGRLTTGADVRHEIPVLPNRVGLPINQRFILVELSNHAELSVTLALDVTNAYVVGYRAGNSAYFFHPDNQEDAEAITHLFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTGGTQLPTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITLENSWGRLSTAIQESNQGAFASPIQLQRRNGSKFSVYDVSILIPIIALMVYRCAP\nAntibody Sequence: QLVETGVQSGGSLRLSCAASGFTLDNYNIGWFRQAPGKEYGGVSCISSDGSTYYADSVKGRFTISRDNAKNTVYLQMNNLKPEDTDVYYCAATKYGSSCPIRPYDYWGQGTQVT", "output": "Paratope: 000000000000000000000000000000010111111110000000000010000000000000000000000000000000000000001111000111111110000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: IVGGEFTEVENQPWFAAIYQKNKSPPSFKCGGSLISPCWVASAAHCFIQLPKKENYVVYLGQSKESSYNPGEMKFEVEQLILHEYYREDSLAYHNDIALLKIRTSTGQCAQPSRSIQTIALPPRFTDAPFGSDCEITGFGKESESDYLYPKNLKMSVVKLVSHEQCMQPHYYGSEINYKMLCAADPEWKTDSCKGDSGGPLICNIEGRPTLSGIVSWGRGCAEKNKPGVYTRVSHFLDWIQSHIG\nAntibody Sequence: VQLQESGGGLVQAGGSLRLSCAASSSYVMGWFRQAPGKEREFVAAISWSGGSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAADLASSRDVSSWYWGQGTQVTVSS", "output": "Paratope: 00000000000000000000000001010001000000000100111010011100000000000000000000000000000000000000010111111101000000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: RMVDLPVIQPRLCTHARWPAPVYGLLVDPSLPSNPQWQNGRVHVDGTLLGTTPISGSWVSCFAAEAAYKFQSGTGEVATFTLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPDQAPYQGRVFASVTAAASLDLVDGRVRAVPRSIYGFQDTIPEYNDGLLVPLAPPIGPFLPGEVLLRFRTYMRQIDTADAAAEAIDCALPQEFVSWFASNAFTVQSEALLLRYRNTLTGQLLFECKLYNEGYIALSYSGSGPLTFPTDGIFEVVSWVPRLYQLASVGS\nAntibody Sequence: VQLQESGGGLVEAGGSLRLSCLGSGLTFSRYAMGWFRQAPGKEREFVASITRSGGSPNYADSVKGRFTISRDNAKNTVYLQMSSLKPEDTAVYYCAGRGSVYYDVWGQGTQVTV", "output": "Paratope: 000000000000000000000000000001010001000000000100101111110100100000000000000000000000000000000000010111100000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: SKPFTLPILTLGELTNSRFPLPIDVLYTNPNESAIVQCQNGRCTLDGELQGTTQLLPTGICAFRGKVTQQVQDEHRGTHWNMTVTNLNGTPFDPTEDVPAPLGTPDFSGQIYGVISQRNTNTVLPANRAHEAVIATYSPKFTPKLGNIQFSTWETQDVSSGQPTKFTPVGLASVDANSHFDQWTLPSYSGALTLNMNLAPSVAPVFPGECLLFFRSFIPLKGGYGNPAIDCLMPQEWVQHLYQESAPSLSDVALVRYVNPETGRTLFEAKLHRNGFLTVARNSAGPVVAPTNGYFRFDSWVNQFYTLAPM\nAntibody Sequence: QVQLQESGGGLVQPGGSLRLSCAASGFTLGYYPIGWFRQAPGKGLEGVSCISGSGGSANYAASVKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCAADLSSLQAMCVIPRPGFSAKAYDYWGLGTQVTVSS", "output": "Paratope: 110000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000111100000000000001111100000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: AGRPLRIGDQLVLEEDYDETYIPSEQEILEFAREIGIDPIKEPELMWLAREGIVAPLPGEWKPCQDITGDIYYFNFANGQSMWDHPCDEHYRSLVIQERAKLSFPRPPPGKPPT\nAntibody Sequence: SMGQVQLQESGGGLVQAGGSLNLSCVASGSSHFNSMGWYRQAPGKQRDLVADISNDGVTNYADSVKDRFTISTNNAKNAVYLQMNNLKPEDTAVYYCNAVAVAGRAFSYWGQGTQVTVSSAA", "output": "Paratope: 11111000000000000000000000000011111000100000011110010111010100000000000000000000000000000000000001011111111111000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: WPQRVVTKKGRTFLYPNDLLQTNPPESLITALVEEYQNPVSAKELQADWPDMSFDERRHVAMNL\nAntibody Sequence: LQESGGGLVQAGESLRLSCAVPPEVFDIRTVAWYRQVPLGKGRELLSSITPWNKTTYEDSVKDRFTISRDNAKYTVYLQMNDLKPEDTAVYYCAQGWGIASMRYWGQGTQVTVSS", "output": "Paratope: 0000000000000000000000011011000000000000000000000101010000000000000000000000000000000000000000001111101100000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: AESLNARWRTAVVDGWNNAFSGRYPFKNVSSDASLPLLAKYLNTDTGRIARFLQNNLSGVLHREGSRWVPDFNPAFLKAINTLSEIADVAFTTGNAGLHFELRPGTAAGVMQTTLITDNQKLIYVNQMPVWKRFTWPADTEAPGASLSWVSTQAGTRQYADLPGSWGLIRLLEMARRKAAPGVASGWSLSWQAQDGRMLNYTLRTEAGEGPLVLLKLRNFVLPETV\nAntibody Sequence: QVQLVESGGGLVQAGGSLRLSCAASGFTFEDYAIGWFRQAPGKEREGVSCISNLDGSTYYPDSVKGRFTASSDKAKNMVYLQMNSLKPEDTAVYYCAAVNAQGIYCTDYIIGPYGMDYWGKGTQVTVSS", "output": "Paratope: 000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000001001111011110111111010000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: DDFAKLEEQFDAKLGIFALDTGTNRTVAYRPDERFAFASTIKALTVGVLLQQKSIEDLNQRITYTRDDLVNYNPITEKHVDTGMTLKELADASLRYSDNAAQNLILKQIGGPESLKKELRKIGDEVTNPERFEPELNEVNPGETQDTSTARALVTSLRAFALEDPGKLPSEKRELLIDWMKRNTTGDALIRAGVPDGWEVADKTGAASYGTRNDIAIIWPPKGDPVVLAVLSSRDKKDAKYDDKLIAEATKVVMKALN\nAntibody Sequence: QVQLQESGGGLVQAGASLKLSCAASGRTFSSYAMGWFRQAPGKEREFVAAISRSGGDTKYADSVKGRFAISRDNDKNTVWLRMNSLKPEDTAVYYCAATTYASLSDTYIGEHIYDDWGQGTQVTVS", "output": "Paratope: 000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000001011100111110110100000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: ANFLAMVDNLQGGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYIDTYFDTERSSTYRSKGFDVTVKYTQGSWTGFVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANIPNVFSMQMCGAGGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWWSYFPKISIYLRDENSSRSFRITILPQLYIQPMYECYRFGISPSTNALVIGATVMEGFYVIFDRAQKRVGFAASPCAEIAGAAVSEISGPFSTEDVASNCVPA\nAntibody Sequence: VQLQESGGGLVQPGGSLRLSCAASGFTFSSAIMTWVRQAPGKGREWVSTIGSDGSITTYADSVKGRFTISRDNARNTLYLQMNSLKPEDTAVYYCTSAGRRGPGTQVTVSS", "output": "Paratope: 000000000000000000000000010001110101000000011100111110110100000000000000000000000000000000000001111100000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: AAEKGFKQAFWQPLCQVSEELDDQPKGALFTLQAAASKIQKMRDAALRASIYAEINHGTNRAKAAVIVANHYAMKADSGLEALKQTLSSQEVTATATASYLKGRIDEYLNLLLQTKESGTSGCMMDTSGTNTVTKAGGTIGGVPCKLQLSPIQPKRPAATYLGKAGYVGLTRQADAANNFHDNDAECRLASGHNTNGLGKSGQLSAAVTMAAGYVTVANSQTAVTVQALDALQEAAAHQPWIDAWKAKKALTGAETAEFRNETAGIAGKTGVTKLVEEALLKKKDSEASEIQTELKKYFSGHENEQWTAIEKLISEQPVAQNLVGDNQPTKLGELEGNAKLTTILAYYRMETAGKFEVL\nAntibody Sequence: VQLQESGGGLVQAGGSLRLSCAASERTFSSLGMGWFRQGPGKEREFAAAISWSGVSTYYADSVKGRFTISRDNDKNTVYLQMNSLKPDDTAVYYCAATSSWNDMALKSAGWYEYWGQGTQVTVSS", "output": "Paratope: 00000000000000000000000010000100000000000000000000010000000000000000000000000000000000000000000000111100000101111100000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: LSLKRALWALCFLGSLAVLLCVCTERVQYYFHYHHVTKLDEVAASQLTFPAVTFCNLNEFRFSQVSKNDLYHAGELLALLNNRYEIPDTQMADEKQLEILQDKANFRSFKPKPFNMREFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYGKCYTFNSGRDGRPRLKTMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVACQEQRLIYLPPPWGTCKAVTMDSDLDFFDSYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDQEYCVCEMPCNLTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEVLNYETIEQKKAYEIAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIK\nAntibody Sequence: QVQLVESGGGLVQPRGSLRLSCAASGFTFSRAAMSWYRQAPGKEREMVSTIGSFGVSTNYSDSVKGRFTISRDNAKNTVYLHMNSLKPEDTAVYYCNARYRSSYPWGQGTQVTVSS", "output": "Paratope: 00000000000000000000000000110111100000000000000000011101100000000000000000000000000000000000000000011011000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: VVVQRLFQVKGRRVVRATEVPVSWESFNNGNCFILDLGNNIHQWCGSNSNRYERLKATQVSKGIRDNERSGRARVHVSEEGTEPEAMLQVLGPKPALPAGTE\nAntibody Sequence: VQLQESGGGLVQAGGSLRLSCAASGRTFSSFVMGWFRQAPGKEREFVASISRSGSVTRYADSAKGRFTISKDNAKNTVSLQMDNLNPDDTAVYYCAADLHRPYGPGSQRTDDYDTWGQGTQVTVSSL", "output": "Paratope: 1000000000000000000000000111111000000000000000000001000000000000000000000000000000000000000000000111111000000001000000000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: ASVIKPEMKIKLRMEGAVNGHKFVIEGEGIGKPYEGTQTLDLTVEEGAPLPFSYDILTPAFNRAFTKYPEDIPDYFKQAFPEGYSWERSMTYEDQGICIATSDITMEGDCFFYEIRFDGTNFPPNGPVMQKKTLKWEPSTEKMYVEDGVLKGDVEMALLLEGGGHYRCDFKTTYKAKKDVRLPDAHEVDHRIEILSHDKDYNKVRLYEHAEARYS\nAntibody Sequence: SSSQVQLVESGGGLVQAGGSLRLSCAASGFPVDTQWMHWYRQAPGKEREWVAAISSTGRSTFYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCTVYVGNRYRGQGTQVTVSAG", "output": "Paratope: 00000000000000000000000000000000000101010000000101001011111111101000000000000000000000000000000000010101010000000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPK\nAntibody Sequence: QVQLVESGGGLVQAGGSLRLSCAASGFPVYRDRMAWYRQAPGKEREWVAAIYSAGQQTRYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNVKDVGHHYEYYDYWGQGTQVTVSA", "output": "Paratope: 0100000000000000000000000111011110001000000000100101111100111100100000000000000000000000000000000011111110100000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: SKPFTLPILTLGELTNSRFPLPIDVLYTNPNESAIVQCQNGRCTLDGELQGTTQLLPTGICAFRGKVTQQVQDEHRGTHWNMTVTNLNGTPFDPTEDVPAPLGTPDFSGQIYGVISQRNTNNLPANRAHEAVIATYSPKFTPKLGNIQFSTWETQDVSSGQPTKFTPVGLASVDANSHFDQWTLPSYSGALTLNMNLAPSVAPVFPGECLLFFRSFIPLKGGYGNPAIDCLMPQEWVQHLYQESAPSLSDVALVRYVNPETGRTLFEAKLHRNGFLTVARNSAGPVVAPTNGYFRFDSWVNQFYTLAPM\nAntibody Sequence: QVQLQESGGGLVQPGGSLRLSCAASGSVSRTYVMGWYRQTPGNQRELVATITSVGSTNYADSLKGRFTISRAENTVYLQMNSLKPEDTAIYYCKYIRYSPIHAPLDYWGQGTQVTV", "output": "Paratope: 00000000000000000000000000000011100010000000000001011101110000000000000000000000000000000000010101111111000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: MDVMNTEVVTVTPEMTVSEVIDLILKTKHLGFPVVEGERLVGIITLHDIIGVEPEERVGNIMSREVVAVSPNQSAFEAFKIMSEMGIGRLPVVEHGRVVGIVSRSDLMRIKEILEALEVMGW\nAntibody Sequence: QVQLQESGGGLVQPGGSLRLSCAASGSGFNNNAMGWYRQAPGKQRELVAAITSFGSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCTAGWGATPRSYWGQGTQVTVSSHHH", "output": "Paratope: 000000000000000000000000000001000000100000011110000101011111100000000000000000000000000000000000001111011000000000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: GLAGRGVIYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGLVMPTFKIVIRLPANAFTGLTWVMSFDAYNRITSRITASADPVYTLSVPHWLIHHKLGTFSCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQAVVELYAELEEATSFLGKPTLVFDPGVFNGKFQFLTCPPIFFDLTAVTALRSAGLTLGQVPMVGTTKVYNLNSTLVSCVLGMGGTVRGRVHICAPIFYSIVLWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEVKIRSPYHRTPARLLAGQSQRDMSSLNFYAIAGPIAPSGETAQLPIVVQIDEIVRPDLSLPSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSNTCRVSMGENPFAAMIACHGLHSGVLDLKLQWSLNTEFGKSSGSVTITKLVGDKAMGLDGPSHVFAIQKLEGTTELLVGNFAGANPNTRFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTSFPV\nAntibody Sequence: QVQLQESGGGSVQVGGSLRVACAASGDTFSGYLAAWFRQAPGKGREGVAAINSKRHTTSYADSVKGRFTISKDNADNIMYLEMNSLKPEDTAIYYCAAADAIGLAEYWSTPTLSAARYKYWGQGTQVTVS", "output": "Paratope: 0000000000000000000000000000000100000000000000000000011001000000100000000000000000000000000000000001111110111100100000010000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: SQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSPITELL\nAntibody Sequence: GQVQLQESGGGLVQPGGSLRLSCSASGFKFNDSYMSWVRRVPGKGLEWVAGIWEDSSAAHYRDSVKGRFTISRDNAKNMLYLQMSSLKSDDTGLYYCVRRGYSGDYRPINNPSSQGTQVTVSSA", "output": "Paratope: 0000000000000000000000000000000001000000000000010000110001010000000000000000000000000000000000000001111101111010000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKK\nAntibody Sequence: SQVQLQESGGGLVQPGGSLRLSCAASGSFFEFGTVGWFRQAPGKQRELVSRITGNDHRYYADSVKGRFTISRDNDETTVYLQMDSLKPEDTAIYHCNILEGQRWSNYWGQGTQVTVSA", "output": "Paratope: 0000000000000000000000000000111111000100000001010010111010100000000000010111100000000000000000000010111100000000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: ASIKKVYRGMKNGAETINDDLEAINSELTSGGNVVHKTGDETIAGKKTFTGNVEVNGSLTLPTKSWSGELGGGIILSLRKKGTTVEYSIGGEISSSILANSNLVNRSVPNEFCPRNRCSLVGHMVGGWNAFHIDIPSSGVCQWFGPTASSGTPRGTGTYPID\nAntibody Sequence: VQLVESGGGLVQPGGSLRLSCEASGFSFDDYAIGWFRQAPGKEREGVSYISMSDGRTYVADSVTGRFTISSDNAKNTVYLQMNSLKLEDTAVYYCAAGRFVTFGSAWSFVGGGPYGIDYWGKGTLVTVSS", "output": "Paratope: 0000000000000000000000000000000000000000000000001000000001101001000000000000000000000000000000000000101111111111111100000000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: NDDVDQSLIIAARNIVRRATVSTDPLASLLEMCHSTQIGGIRMVDILRQNPTEEQAVDICKAAMGLRISSSFSFGGFTFKRTSGSSVKKEEEVLTGNLQTLKIRVHEGYEEFTMVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWGIEPIDNVMGMIGILPDMTPSTEMSLRGVRVSKMGVDESTERVVVSIDRFLRVRDQRGNVLLSPEEVSETQGTERLTITYS\nAntibody Sequence: QVQLQESGGGLVQPGGSLRLSCAASGFTFKMYAMSWVRQAPGKGLEWVSSINSAGGSTSYVDSVKGRFTISRDNAKNTLYLQMNSLKPDDTAVYYCVQGRNWPYDYRGQGTQVTVS", "output": "Paratope: 00000000000000000000000000000000001010000000111001000000001011111111100000000000000110100000000000011111100000000000"} +{"instruction": "Analyze the antibody sequence and predict the positions that form the paratope for the specified antigen.", "input": "Antigen Sequence: AKVMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVYLRVYREAKEQIRKIDRASAMKEHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLAFDKIIHLTDDSFDTDVLKADGAILVDFWAEWSGPSKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAE\nAntibody Sequence: QVQLQESGGGLVQAGGSLRLSCAASGSIFSINTMGWYRQAPGKQRELVAAIHSGGSTNYANSVKGRFTISRDNAANTVYLQMNSLKPEDTAVYYCNVKDYGAVLYEYDYWGQGTQVTVSS", "output": "Paratope: 010000000000000000000000001111101000000000000000011111011100000000000000110000000000000000000000001111111110100000000000"} +{"instruction": "Determine which residues in the antibody sequence form the paratope for binding to the given antigen.", "input": "Antigen Sequence: IWELKKDVYVVELDWYPDAPGEMVVLTCDTPEEDGITWTLDQSSEVLGSGKTLTIQVKEFGDAGQYTCHKGGEVLSHSLLLLHKKEDGIWSTDILKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDLTFSVKSSRGSSDPQGVTCGAATLSAERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYENYTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKREKKDRVFTDKTSATVICRKNASISVRAQDRYYSSSWSEWASVPC\nAntibody Sequence: EVQLVESGGGLVQAGGSLRLSCAASGRTFSWSAVGWFRQAPGKEREFVAAIRWSGGSPYYADSVKDRFTISRDNAKNTVYLQMNSLRPEDTAVYLCGETSLFPTSRGSHYDTWGQGTQVTVSS", "output": "Paratope: 000000000000000000000000001111100000000000000000000100011111000010000000000000000000000000000000000111111101101000000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: SKGEELFTGVVPILVELDGDVNGHKFSVRGEGEGDATNGKLTLKFICTTGKLPVPWPTLVTTLVQCFSRYPDHMKRHDFFKSAMPEGYVQERTISFKDDGTYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNFNSHNVYITADKQKNGIKANFKIRHNVEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSVLSKDPNEKRDHMVLLEFVTAAGIT\nAntibody Sequence: QVQLQESGGGSVQAGGSLRLSCAASGPTYSSYFMAWFRQAPGMEREGVAASSYDGSTTLYADSVKGRFTISQGNAKNTKFLLLNNLEPEDTAIYYCALRRRGWSNTSGWKQPGWYDYWGQGTQVTV", "output": "Paratope: 000000000000000000000000001111110000000000000000000011000000000000000000000100000000000000000000001111111000000000010000000000"} +{"instruction": "Identify the binding sites (paratope) on the antibody sequence that interact with the provided antigen.", "input": "Antigen Sequence: NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPK\nAntibody Sequence: QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCARTENVRSLLSDYATWPYDYWGQGTQVTVSS", "output": "Paratope: 0000000000000000000000000010110000000000000000000001011010000000000000000000000000000000000000000001111111010000001100000000000"} +{"instruction": "Predict which positions in the antibody sequence can bind to the given antigen (paratope prediction).", "input": "Antigen Sequence: AGAVVGGLGGYMGSAMSRPMIHFGNDWEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNITIKQHTVTNFTETDVKMMERVVEQMCVTQYQKESQAYYD\nAntibody Sequence: QVQLQESGGGLVQPGGSLRLSCAASGRTFSSYNMGWFRQAPGKGREFVASITSSGDKSDYTDSVKGRFTISRDNAKNTMYLQMNNLKPEDTATYYCARGLGIYIIRARGGYDHWGQGTQVTVSS", "output": "Paratope: 0000000000000000000000000000000000000000000001000000000000101100000000000000000000000000000000000001111111111100000000000000"}