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- license: cc-by-4.0
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+ ---
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+ license: cc-by-4.0
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+ ---
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+ # Nanobody Polyreactivity Prediction Dataset
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+ ## Dataset Overview
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+ This dataset helps predict whether nanobodies will show polyreactivity - the tendency to bind to multiple unrelated antigens. Polyreactivity is usually an unwanted feature in therapeutic applications, as it can lead to side effects and reduced effectiveness.
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+ Accurately predicting nanobody polyreactivity is important for screening high-quality therapeutic candidates and understanding the molecular basis of antibody specificity.
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+ ## Data Collection
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+ The dataset is based on nanobody polyreactivity data measured in laboratory experiments and we collect it from public literature. Nanobodies are classified as polyreactive or non-polyreactive based on their binding to these different antigens.
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+ ## Dataset Structure
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+ The dataset is split into training, validation, and test sets.
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+ ### File Format
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+ CSV files contain these columns:
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+ - `seq`: Nanobody amino acid sequence
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+ - `label`: Binary label indicating polyreactivity (1 for high polyreactivity, 0 for low polyreactivity)
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+ ## Uses and Limitations
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+ ### Uses
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+ - Develop models to predict nanobody polyreactivity
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+ - Screen for highly specific nanobody candidates
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+ - Understand sequence features and molecular basis of polyreactivity
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+ ### Limitations
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+ - Experimental methods for measuring polyreactivity may vary
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+ - Polyreactivity exists on a spectrum rather than as a strict binary property
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+ - Different experimental conditions may affect polyreactivity
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+ ## Evaluation Metrics
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+ Model performance is evaluated using:
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+ - Accuracy
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+ - F1 Score
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+ - Precision
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+ - Recall
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+ - AUROC (Area Under the Receiver Operating Characteristic curve)
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+ - AUPRC (Area Under the Precision-Recall Curve)