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- ---
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- license: cc-by-4.0
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+ ---
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+ license: cc-by-4.0
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+ ---
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+ # Nanobody Thermal Stability Dataset
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+ ## Dataset Overview
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+ This dataset helps predict how stable nanobody sequences are at different temperatures. Thermal stability is important for nanobody engineering and applications, affecting how well they work in different environments.
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+ The dataset includes two types of stability measurements:
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+ - Melting temperature (Tm): The temperature at which nanobodies start to unfold
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+ - Sequence stability: Stability scores based on sequence properties
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+ ## Data Collection
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+ This dataset comes from experimental measurements of various nanobody sequences. The data is collected from published scientific literature and laboratory measurements, then stratified split based on tm value.
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+ ## Dataset Structure
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+ The dataset is split into training, validation, and test sets:
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+ - `train_tm.csv`, `val_tm.csv`, `test_tm.csv`: Melting temperature data
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+ - `train_seq.csv`, `val_seq.csv`, `test_seq.csv`: Sequence stability data
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+
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+ ### File Format
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+ Each CSV file contains these columns:
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+ - `seq`: Nanobody amino acid sequence
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+ - `label`: Thermal stability value (melting temperature or stability score)
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+ ## Uses and Limitations
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+ ### Uses
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+ - Develop machine learning models to predict nanobody thermal stability
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+ - Help design more stable nanobodies
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+ - Provide reference data for nanobody research
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+ ### Limitations
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+ - Limited dataset size may not represent all nanobody families
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+ - Experimental conditions may affect measurements
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+ - Models should account for data distribution characteristics
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+ ## Evaluation Metrics
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+ Model performance is evaluated using:
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+ - Spearman correlation
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+ - R² (coefficient of determination)
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+ - Root Mean Squared Error (MSE)
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+ - Mean Absolute Error (MAE)