| path,size_bytes,sha256,num_rows,num_cols | |
| raw_counts_data/MasterFile.parquet,501509914,01460957be1fd1119e1afc36a1848c77bb78812eebb87c0665a50fb269ec1166,768162,274 | |
| raw_counts_data/counts.h5ad,3537733834,3daed5b798baaacf027b9c3bd4bb248d10e5acf186885eb2dbb076029a7d6094,, | |
| raw_counts_data/data_shape_summary.md,11222,d8c5d7319f39b8dbef01f3a9c6eb14cd73186026aa5792237ea7fab38a3ab85e,, | |
| raw_counts_data/data_shape_visualization.html,52357,89c078aaec7d313130aad98da0f34c6e84f04c514b9ec56ddf95ed9094cbdfe2,, | |
| normalized_image_embeddings/README.md,1052,3027d11e67646c2ad5bf73b07d09e680a37bebc1e002e8f085ee7bab7e469e2e,, | |
| normalized_image_embeddings/biomarker_intensity_layer.parquet,1204143,f2528c83634651d201c4b17b6384dd82f29424c9baafd3685e1e4fcff4410040,18942,11 | |
| normalized_image_embeddings/normalized_image_embeddings.parquet,5124025,9025bc8dd34f5f19751f25ff93f55ea7573e49e2607a569164e474ff1c7662f3,21795,39 | |
| chemical_features/README.md,1152,687ce8f14995a19f75c7cb4de8947723aac2eaa017d85c425330c523c39d4ca4,, | |
| chemical_features/compound_chemistry_feature_master.parquet,295191655,d250f889dd9814c44cbce8f30a998f447a00829d6633acd2f1d363102392fc69,144645,961 | |
| active_seq_same_well/README.md,1261,fd169e2e5f2a69c8f09e79aa04657980213b8e340ed1fec4204108860713dea1,, | |
| active_seq_same_well/activeseq_control_name_public_compound_map.parquet,7165,c98b7d8750208afc5f43894be871810755edb364a41bafcdd7688f7f8daffca2,36,7 | |
| active_seq_same_well/assay_well_dataframe.parquet,19218690,c9f9477f73f3efd1533e74db89a1cd295aade0299ddd0c114c67d5c5fec17cd9,126662,35 | |
| active_seq_same_well/imaging_lats.parquet,347717660,7ad7de5f087c1045438e42a05bdf5a69d694da075004edbb4e092d3cf349bfc8,126662,451 | |
| active_seq_same_well/joined_same_well_data_with_public_compound_id.parquet,56796600,988488fdf9bf852a90855092537554356d1994de9edff43a7e229d77b57a082c,18727,550 | |
| active_seq_same_well/matches_table.parquet,404992,781c3cb6dc827a8200546da9c33027e23b463b4f9a5d4f441accefa298f04572,20222,8 | |
| active_seq_same_well/rnaseq_lats.parquet,12168449,a1cd57f42ae0b2c7b9c6d85628550dbb56d49ed07962ac47263b9be49167bd59,61101,33 | |
| active_seq_same_well/rnaseq_obs.parquet,3547977,7ec180fbb9a3f1e5d45d619d5e5d7f29083d098c0b7bebb6cdf30bd104c6a8d4,61101,27 | |
| external_reference/README.md,1151,b3c81e3e23e8242b2f54c7f1d77ef306c3015584cc246c8b4ccaf597293d4e6a,, | |
| external_reference/check_lincs_metadata.py,758,fa0fa078f78f1d72d2915d0ae9ed0754bca0a3961e62f8b1e366ca33c989c09f,, | |
| external_reference/download_datasets.ps1,1921,01e3a81401a5e82f1a6a44acda25fc99b61e506cab1bdc3d466c96aa2715d431,, | |
| external_reference/extract_h5ad_metadata.py,1454,f37db19c350af8305722b68d0a34cff44edb46c845d8e209e23765cab2fe267b,, | |
| external_reference/fetch_zenodo.py,617,575890d1669125e1e116d8f9439c938aa3cf30fb62e4269f49040b0c524daf4a,, | |
| external_reference/moa_annotation_zic_named_controls_20260525.json,11762,3df775fdf1fdd410d4960bc00ce25435b7e98105d6a56d60dbdebf719acb21c2,, | |
| external_reference/update_catalog.py,1426,0103886f485aee6279117186734bfdff8ec04e953a6065737ec62f62f487d629,, | |
| external_reference/benchmark_outputs/lincs_zscreen_legacy_overlap_20260428/external_cell_line_overlap.parquet,2267,6495c69b0f85eba451fcd0ef9bfa4bdafccbcc9b8197081aefd4a4041a9116d5,6,3 | |
| external_reference/benchmark_outputs/lincs_zscreen_legacy_overlap_20260428/needed_lincs_signatures.parquet,6866,75a1c60c712dbfb8855c0955a87fc67cab6a6ea50ff67e595f6e247c8145524a,108,8 | |
| external_reference/benchmark_outputs/lincs_zscreen_legacy_overlap_20260428/overlap_summary.parquet,4207,36982a5281d6ef8a5ab1e62f5bb5a8ac7d492d4d3fcd5e8cb9c3db9c09315b89,2,5 | |
| external_reference/benchmark_outputs/lincs_zscreen_legacy_overlap_20260428/zscreen_lincs_l1000_all_pairs.parquet,26710,6061db5679f74aee247f50e366d2d20ebe70a924e0302eb49f01a7f9057b9f74,1570,8 | |
| external_reference/benchmark_outputs/lincs_zscreen_legacy_overlap_20260428/zscreen_lincs_l1000_compound_overlap.parquet,4843,4acb96856f94fb2c6ff2ad8ae5723c75c17b9bc49f4bc6ee9b9a2544bd534459,14,6 | |
| external_reference/benchmark_outputs/lincs_zscreen_legacy_overlap_20260428/zscreen_lincs_l1000_correlation_summary.parquet,5478,ce1908b06b4dc0520bd40b5aaa79214cbb12024454f3ef2e0c7e9ab3de83febe,1,8 | |
| external_reference/benchmark_outputs/lincs_zscreen_legacy_overlap_20260428/zscreen_lincs_l1000_null_per_compound.parquet,5478,ec5a4524723df9000989868166a70e8338d80b1ae3b76466e01cb14a378bc9e8,10,7 | |
| external_reference/benchmark_outputs/lincs_zscreen_legacy_overlap_20260428/zscreen_lincs_l1000_null_summary.parquet,5711,2c3a7ddbfe8fe4db97f0e9993fcbe359fd551afa9648aeaa9cfb36f47161732b,2,8 | |
| external_reference/benchmark_outputs/lincs_zscreen_legacy_overlap_20260428/zscreen_lincs_l1000_signature_correlation_headline.parquet,10311,dc6ede684531742de1980970449999fde34a495b47f620135663d95157e733ff,11,14 | |
| external_reference/benchmark_outputs/lincs_zscreen_legacy_overlap_20260428/zscreen_lincs_l1000_signature_correlation_long.parquet,13551,2d7c7ee68647f2e9a6bd3437d7d09260cd8e2284a0b98c408a81b9b5e73c3532,115,14 | |
| external_reference/benchmark_outputs/lincs_zscreen_legacy_overlap_20260428/zscreen_overlap_compound_rank_signatures_top_genes.parquet,262614,51346a4b17cd87d0b180893ca7667c0dda278f415dd2ca8cecbe5332ec91f5b5,15000,12 | |
| external_reference/benchmark_outputs/lincs_zscreen_legacy_overlap_20260428/zscreen_overlap_compound_signature_metadata.parquet,5951,210904cff147a0950a3960e4cc9e3dadfaf0d98ae816ba2858efa890d3f4e54e,30,7 | |
| external_reference/benchmark_outputs/lincs_zscreen_legacy_overlap_20260428/zscreen_tahoe_compound_overlap.parquet,4905,b52bf28397ba81734f8dbc38abff776f1098c5afdd892cb0981880c5ae95435a,4,7 | |
| external_reference/catalog/control_transcriptome_expansion_20260525_catalog_addendum.csv,1918,fc86793cefc235eba32073674e4983e16f977e5cf0266261c745940e64828a1d,, | |
| external_reference/catalog/control_transcriptome_expansion_20260525_catalog_addendum.md,3336,31d03d416f62a75fb22d1b498dde10fa5fd718eaf64153cac0965bb5b065dcc8,, | |
| external_reference/catalog/external_reference_dataset_catalog.csv,7513,e84f177165d8f9f64241bf6e5ff42fa9e263bec0c0b887922c704683a987b504,, | |
| external_reference/catalog/external_reference_file_manifest.csv,14391,49b3e8b8895b0688e0d7775ab33e08e0222b9f55fc30fa7622bc601632ea1565,, | |
| external_reference/catalog/processing_provenance.md,2806,933f081c4cc6d5d6498c2399a76d90657c45ab01c9bff872a1b7bf660e26982d,, | |
| external_reference/catalog/source_aliases.csv,712,5ef45cbfecdf451165bcba9e037682ed88657879846fbfbe5ff3d16ee836722f,, | |
| external_reference/compound_atlases/control_transcriptome_expansion_20260525/PACKAGE_LOCAL_FILE_MANIFEST_20260525.csv,1879,f75026d91eb8085290d39662abb0fdfc900c28d757ada08bb9c7f90e26621261,, | |
| external_reference/compound_atlases/control_transcriptome_expansion_20260525/README.md,2466,b25fee762422f6dbbb0cc4fcce5c82a7f369289529c1f6ae5bf2f57e031d3e2b,, | |
| external_reference/compound_atlases/control_transcriptome_expansion_20260525/VALIDATION_control_transcriptome_expansion_20260525.json,1375,174884aa2469471cd50dba3424170cf6c01885733e0b3617626b1f57842a9ce0,, | |
| external_reference/compound_atlases/control_transcriptome_expansion_20260525/control_30_rank_signatures_top_genes_same_schema_20260525.parquet,28025549,addc03a0ec9fc7a84e62618c01d9294c45546fe295a7301f0a03f3a9736036d2,2741454,11 | |
| external_reference/compound_atlases/control_transcriptome_expansion_20260525/control_30_signature_metadata_same_schema_20260525.parquet,58116,18da15cbd81c9d5b7758e95dcefe8e14759ae7077a41d59f24f7300a77ea8b75,5513,7 | |
| external_reference/compound_atlases/control_transcriptome_expansion_20260525/control_40_rank_signatures_top_genes_same_schema_20260525.parquet,28498234,b8e7f9c45c56ab10d78582be682eaf71bfd4ba65046da65e5c87183572f35cb8,2795454,11 | |
| external_reference/compound_atlases/control_transcriptome_expansion_20260525/control_40_signature_metadata_same_schema_20260525.parquet,59728,9d8c4f97f4374cc878d1392e5aba167757b22ab38cbce1ebbad14a3eaa6fc487,5621,7 | |
| external_reference/compound_atlases/control_transcriptome_expansion_20260525/control_transcriptome_expansion_file_manifest_20260525.csv,1887,6d519121ce86bc5d350138c47647b59dfed1c20827492460c8e9c3c39701142f,, | |
| external_reference/compound_atlases/control_transcriptome_expansion_20260525/lincs_l1000_fetch_manifest_additional_29_sigcom_20260525.csv,2139169,b3f94bedfc4db446a7d8fc3255f65f6f5042f31a54bb1e573392ea1ee1aacce5,, | |
| external_reference/compound_atlases/control_transcriptome_expansion_20260525/lincs_l1000_rank_signatures_top_genes_additional_29_sigcom_20260525.parquet,26438754,c56bcd089328b0918064975746d54f0d6093b73cf12ce52f21e7f6c1272bf7bc,2731500,11 | |
| external_reference/compound_atlases/control_transcriptome_expansion_20260525/lincs_l1000_signature_metadata_additional_29_sigcom_20260525.parquet,56950,d22c98eb957424a5403f6fe68b4f06d7e08843a5fd1ece8a4fd8f097a8ebfe1e,5463,7 | |
| external_reference/compound_atlases/control_transcriptome_expansion_20260525/summary_control_transcriptome_expansion_20260525.json,1430,70a3a1e5af631813b9cd4fc26d8e468f5cad71c4b23c866ad50ba63c2074d0f2,, | |
| external_reference/compound_atlases/control_transcriptome_expansion_20260525/tahoe_100m_fetch_manifest_capmatinib_harmonizome_20260525.csv,14813,0cc9ffe912758d279048bc51090895ba8fac9c3625e786ee7fcad76aaacdb425,, | |
| external_reference/compound_atlases/control_transcriptome_expansion_20260525/tahoe_100m_rank_signatures_top_genes_capmatinib_harmonizome_20260525.parquet,136141,62634eacbdb85170e557064c34a643a0f5900488ab8ee5ef2ccfa9f7c0735d5f,9954,11 | |
| external_reference/compound_atlases/control_transcriptome_expansion_20260525/tahoe_100m_signature_metadata_capmatinib_harmonizome_20260525.parquet,5621,f8348b307f78f0f00e1467028e160814cfe9a53bbc925201c91d655c09718053,50,7 | |
| external_reference/compound_atlases/lincs_l1000/processed/lincs_l1000_fetch_manifest_additional_29_sigcom_20260525.csv,2139169,b3f94bedfc4db446a7d8fc3255f65f6f5042f31a54bb1e573392ea1ee1aacce5,, | |
| external_reference/compound_atlases/lincs_l1000/processed/lincs_l1000_rank_signatures_top_genes.parquet,611161,cf5c7b6ac5585e979a9d2d5babf364f4c633ddf8b271992e55ec46b5c3c0e3b9,54000,11 | |
| external_reference/compound_atlases/lincs_l1000/processed/lincs_l1000_rank_signatures_top_genes_additional_29_sigcom_20260525.parquet,32745804,d32bb69bb2a459b37cea0ee606e90bf1b89355cdc5daf687f1fcf4d0fd65ee45,2731500,11 | |
| external_reference/compound_atlases/lincs_l1000/processed/lincs_l1000_signature_metadata.parquet,6243,f879d750b93b4371e2db4b5c632b2df780b7420b58ada57771a39d13c9943931,108,7 | |
| external_reference/compound_atlases/lincs_l1000/processed/lincs_l1000_signature_metadata_additional_29_sigcom_20260525.parquet,56950,d22c98eb957424a5403f6fe68b4f06d7e08843a5fd1ece8a4fd8f097a8ebfe1e,5463,7 | |
| external_reference/compound_atlases/tahoe_100m/metadata/tahoe_cell_line_metadata.parquet,18832,ef2e45bf249658d9c8faed4f189bd6767c29ac478c1144a6d6461230a2b1f4c8,1000,10 | |
| external_reference/compound_atlases/tahoe_100m/metadata/tahoe_drug_metadata.parquet,33269,d6c16e39c867f8210176e4a37e189e636a05f52b1617896283356167906426db,379,9 | |
| external_reference/compound_atlases/tahoe_100m/metadata/tahoe_sample_metadata.parquet,76198,fb5321712ed7f8601447feb59d0d3ff751aabed7e1fcf3b33f488f9338ef56ae,1344,8 | |
| external_reference/compound_atlases/tahoe_100m/processed/tahoe_100m_fetch_manifest_capmatinib_harmonizome_20260525.csv,14813,0cc9ffe912758d279048bc51090895ba8fac9c3625e786ee7fcad76aaacdb425,, | |
| external_reference/compound_atlases/tahoe_100m/processed/tahoe_100m_rank_signatures_top_genes_capmatinib_harmonizome_20260525.parquet,136141,62634eacbdb85170e557064c34a643a0f5900488ab8ee5ef2ccfa9f7c0735d5f,9954,11 | |
| external_reference/compound_atlases/tahoe_100m/processed/tahoe_100m_signature_metadata_capmatinib_harmonizome_20260525.parquet,5621,f8348b307f78f0f00e1467028e160814cfe9a53bbc925201c91d655c09718053,50,7 | |
| external_reference/crispr_perturbation_atlases/norman_weissman_2019_k562_crispra/norman_rank_signatures_top_genes.parquet,1653090,fb2a81dd6fbbb878532047867322f7e01c2d7fb0962132d792ef3802606a83b6,118000,14 | |
| external_reference/crispr_perturbation_atlases/norman_weissman_2019_k562_crispra/norman_signature_metadata.parquet,12288,a646b3080372e19dc366b29bfb91625736e5300958256563345f168e2a3e3cba,236,9 | |
| external_reference/crispr_perturbation_atlases/replogle_2022_k562_gwps/replogle_rank_signatures_top_genes.parquet,44043143,5bbffd31324230d8dc807b40ba5c8df7e00f69486943765ffe5628c23a8c2a28,4301500,17 | |
| external_reference/crispr_perturbation_atlases/replogle_2022_k562_gwps/replogle_signature_metadata.parquet,418587,f4e966c0ca7694a606a4ec2e1f2de058266a5aceb8995e72dbd8d28732900ef5,8603,12 | |
| external_reference/crispr_perturbation_atlases/replogle_2022_rpe1/rpe1_rank_signatures_top_genes.parquet,12717844,d9fceffe316af088b1cf9447322eb28722b1bdf9f151d5d4ba9c86b98e4b4d9a,1061000,12 | |
| external_reference/crispr_perturbation_atlases/replogle_2022_rpe1/rpe1_signature_metadata.parquet,72126,6f33e1853506ac82db7fd95b040c2e743f93211e36f2cc87de0826a194b1fad3,2122,8 | |
| external_reference/crispr_perturbation_atlases/scperturb_thp1_selected/scperturb_rank_signatures_top_genes.parquet,536976,84430bc595775ec54b86100748fd9cbc69f590e427be2fc5120c2c2cd60212c9,39000,15 | |
| external_reference/crispr_perturbation_atlases/scperturb_thp1_selected/scperturb_signature_metadata.parquet,8859,3fc9444d49b117eed77c348f5654763783b1fb0e624f09ebae3739a3417751fb,78,10 | |
| external_reference/crispr_perturbation_atlases/scperturb_thp1_selected/source_manifest/scperturb_zenodo_files.csv,6220,ec69d040a2304571118299a0d165813a525fedfb5c234af4291269335f7ed819,, | |
| external_reference/crispr_perturbation_atlases/scperturb_thp1_selected/source_manifest/scperturb_zenodo_files.json,15299,b7643a934abc0ea70431cae440a01e76efb2f87feafe1e17c4b66ee73b8b48e7,, | |
| external_reference/gene_sets/disease_reversal_signatures.json,24266,583dd5d0dd03a940e35785f8e712362d7f76aa11c8677b316d894b66c68a9e00,, | |
| external_reference/gene_sets/gladyshev_aging_signatures.json,949,3b34ac1d747dad9f22944b4d5c68f5d2259a801b1eaaf5a4c37ae43ff650817d,, | |
| external_reference/gene_sets/enrichr/enrichr_KEGG_2021_Human.gmt,209631,566763b3402ee1f06612cc48b57e2a0f3f92a9a9e7d1871cc2da9f940e2d609a,, | |
| external_reference/gene_sets/enrichr/enrichr_MSigDB_Hallmark_2020.gmt,44235,4275592957a1587652092bb398cf77216fde5b8daa2aedaa0e016f7d10bbdb81,, | |
| external_reference/gene_sets/enrichr/enrichr_Reactome_2022.gmt,778913,cfe1adc75aa3137ba74c1b35a3098e88ea1708b204e5edfd788092b7ef5c08f8,, | |