Add chemical_features
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chemical_features/README.md
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# Chemical Feature Layer
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This folder contains the public compound-level chemistry feature table used to connect Z-Screen biological measurements to compound and building-block chemistry.
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## File
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- `compound_chemistry_feature_master.parquet`
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## Contents
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The table is keyed by `public_compound_id` and includes public building-block identifiers, support metadata, molecular descriptors where available, and numeric chemistry embeddings. In the current release audit, the table contains 144,645 rows and 961 columns.
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Major feature groups include:
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- Public compound and building-block identifiers.
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- Cell-line and library support metadata.
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- Formula and InChIKey fields where available.
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- Whole-molecule Chemeleon embedding features.
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- Whole-molecule ChemBERTa embedding features.
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- Per-building-block Chemeleon embedding feature blocks for BB0 through BB4.
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## How To Use
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This layer supports chemical-neighborhood analysis, SAR-like enrichment, analog search, and linking biological response patterns to public compound/building-block IDs. It is most appropriate for prioritization and hypothesis generation.
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chemical_features/compound_chemistry_feature_master.parquet
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version https://git-lfs.github.com/spec/v1
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oid sha256:d250f889dd9814c44cbce8f30a998f447a00829d6633acd2f1d363102392fc69
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size 295191655
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