AgroNT Evaluation Task: - chromatin_access_MH63_agront - chromatin_access_ZS97_agront - poly_a_japonica_agront - poly_a_indica_agront - bulk_gene_exp_agront Short-sequence Task: - chromatin_access_512 - Epigenetic_Marks_Prediction-Histone - smallRNA - splice_sites_labels - RiceVar_512 - enhancer_strength Long-sequence Task: - enhancer_regions - lncRNA - rice_nlr - RiceVar_6k - RiceVar_8k Single-nucleotide Task: - CDS_multilabel - bulk_single_base_Callus Sweep Region Identification Task: - sweep_region_psr - sweep_region_sor - sweep_region_8k - sweep_region_32k - sweep_region_100k Varieties Classification Task: - varieties_classification_8k - varieties_classification_32k - varieties_classification_128k dataset_feature: chromatin_access_MH63_agront: seq_for_item: 1 seq_key: sequence label_key: label eval_task: labels data_split: ['train', 'test','eval'] sample_num: 100000 min_length: 1000 max_length: 1000 dataset_ratio: [0.8, 0.1, 0.1] chromatin_access_ZS97_agront: seq_for_item: 1 seq_key: sequence label_key: label eval_task: labels data_split: ['train', 'test','eval'] sample_num: 100000 min_length: 1000 max_length: 1000 dataset_ratio: [0.8, 0.1, 0.1] poly_a_japonica_agront: seq_for_item: 1 seq_key: sequence label_key: label eval_task: classification data_split: ['train', 'test'] sample_num: 140853 min_length: 400 max_length: 400 dataset_ratio: [0.86, 0.14] label_train_counter: [(0, 80414), (1, 40207)] label_test_counter: [(0, 13488), (1, 6744)] poly_a_indica_agront: seq_for_item: 1 seq_key: sequence label_key: label eval_task: classification data_split: ['train', 'test'] sample_num: 114915 min_length: 400 max_length: 400 dataset_ratio: [0.85, 0.15] label_train_counter: [(0, 65426), (1, 32713)] label_test_counter: [(0, 11184), (1, 5592)] bulk_gene_exp_agront: seq_for_item: 1 seq_key: sequence label_key: label eval_task: regression data_split: ['train', 'test','eval'] sample_num: 38648 min_length: 6000 max_length: 6000 dataset_ratio: [0.8, 0.1, 0.1] chromatin_access_512: seq_for_item: 1 seq_key: sequence label_key: label eval_task: labels data_split: ['train', 'test','eval'] sample_num: 9991 min_length: 511 max_length: 511 dataset_ratio: [0.8, 0.1, 0.1] Epigenetic_Marks_Prediction-Histone: seq_for_item: 1 seq_key: sequence label_key: label eval_task: labels data_split: ['train', 'test', 'eval'] sample_num: 100000 min_length: 708 max_length: 1024 dataset_ratio: [0.80, 0.10, 0.10] smallRNA: seq_for_item: 1 seq_key: sequence label_key: label eval_task: classification data_split: ['train', 'test', 'eval'] sample_num: 189654 min_length: 16 max_length: 366 dataset_ratio: [0.80, 0.10, 0.10] label_train_counter: [(0, 79942), (1, 71780)] label_test_counter: [(0, 10085), (1, 8880)] label_eval_counter: [(0, 9973), (1, 8993)] splice_sites_labels: seq_for_item: 1 seq_key: sequence label_key: label eval_task: classification data_split: ['train', 'test', 'eval'] sample_num: 100000 min_length: 399 max_length: 399 dataset_ratio: [0.8, 0.1, 0.1] label_train_counter: [(0, 72720), (1, 13788), (2, 13492)] label_test_counter: [(0, 6652), (1, 1728), (2, 1620)] label_eval_counter: [(0, 6603), (1, 1727), (2, 1670)] RiceVar_512: seq_for_item: 1 seq_key: sequence label_key: label eval_task: classification data_split: ['train', 'test'] sample_num: 14979 min_length: 512 max_length: 512 dataset_ratio: [0.90, 0.10] label_train_counter: [(0, 11667), (1, 1813)] label_test_counter: [(0, 1312), (1, 187)] enhancer_strength: seq_for_item: 1 seq_key: sequence label_key: label eval_task: regression data_split: ['train', 'test', 'eval'] sample_num: 12539 min_length: 700 max_length: 700 dataset_ratio: [0.8, 0.1, 0.1] enhancer_regions: seq_for_item: 1 seq_key: sequence label_key: label eval_task: classification data_split: ['train', 'test'] sample_num: 10822 min_length: 367 max_length: 5803 dataset_ratio: [0.71, 0.29] label_train_counter: [(0, 3833), (1, 3833)] label_test_counter: [(0, 1578), (1, 1578)] lncRNA: seq_for_item: 1 seq_key: sequence label_key: label eval_task: classification data_split: ['train', 'test', 'eval'] sample_num: 3238 min_length: 201 max_length: 6000 dataset_ratio: [0.80, 0.10, 0.10] label_train_counter: [(0, 1643), (1, 947)] label_test_counter: [(0, 201), (1, 124)] label_eval_counter: [(0, 208), (1, 115)] rice_nlr: seq_for_item: 1 seq_key: sequence label_key: label eval_task: classification data_split: ['train', 'test','eval'] sample_num: 22114 min_length: 156 max_length: 6000 dataset_ratio: [0.8, 0.1, 0.1] label_train_counter: [(0, 12974), (1, 4717)] label_test_counter: [(0, 1630), (1, 582)] label_eval_counter: [(0, 1616), (1, 595)] RiceVar_6k: seq_for_item: 1 seq_key: sequence label_key: label eval_task: classification data_split: ['train', 'test'] sample_num: 19979 min_length: 6000 max_length: 6000 dataset_ratio: [0.90, 0.10] label_train_counter: [(0, 16209), (1, 1773)] label_test_counter: [(0, 1773), (1, 224)] RiceVar_8k: seq_for_item: 1 seq_key: sequence label_key: label eval_task: classification data_split: ['train', 'test'] sample_num: 14955 min_length: 8192 max_length: 8192 dataset_ratio: [0.90, 0.10] label_train_counter: [(0, 11658), (1, 1777)] label_test_counter: [(0, 1300), (1, 220)] CDS_multilabel: seq_for_item: 1 seq_key: sequence label_key: label eval_task: labels data_split: ['train', 'test'] sample_num: 40396 min_length: 512 max_length: 512 dataset_ratio: [0.62, 0.38] bulk_single_base_Callus: seq_for_item: 1 seq_key: sequence label_key: label eval_task: regression data_split: ['train', 'test','eval'] sample_num: 123989 min_length: 6000 max_length: 6000 dataset_ratio: [0.8, 0.1, 0.1] sweep_region_psr: seq_for_item: 1 seq_key: sequence label_key: label eval_task: classification data_split: ['train', 'test', 'eval'] sample_num: 57836 min_length: 6000 max_length: 6000 dataset_ratio: [0.8, 0.1, 0.1] label_train_counter: [(0, 30776), (1, 15492)] label_test_counter: [(0, 3920), (1, 1865)] label_eval_counter: [(0, 3858), (1, 1925)] sweep_region_sor: seq_for_item: 1 seq_key: sequence label_key: label eval_task: classification data_split: ['train', 'test', 'eval'] sample_num: 48620 min_length: 6000 max_length: 6000 dataset_ratio: [0.8, 0.1, 0.1] label_train_counter: [(0, 25892), (1, 13004)] label_test_counter: [(0, 3271), (1, 1591)] label_eval_counter: [(0, 3249), (1, 1613)] sweep_region_8k: seq_for_item: 1 seq_key: sequence label_key: label eval_task: classification data_split: ['train', 'test'] sample_num: 21579 min_length: 8000 max_length: 8000 dataset_ratio: [0.8, 0.1, 0.1] label_train_counter: [(0, 11498), (1, 5765)] label_test_counter: [(0, 1413), (1, 744)] label_eval_counter: [(0, 1475), (1, 684)] sweep_region_32k: seq_for_item: 1 seq_key: sequence label_key: label eval_task: classification data_split: ['train', 'test'] sample_num: 9840 min_length: 32000 max_length: 32000 dataset_ratio: [0.8, 0.1, 0.1] label_train_counter: [(0, 5262), (1, 2610)] label_test_counter: [(0, 656), (1, 328)] label_eval_counter: [(0, 642), (1, 342)] sweep_region_100k: seq_for_item: 1 seq_key: sequence label_key: label eval_task: classification data_split: ['train', 'test'] sample_num: 7200 min_length: 100000 max_length: 100000 dataset_ratio: [0.8, 0.1, 0.1] label_train_counter: [(0, 3859), (1, 1901)] label_test_counter: [(0, 472), (1, 248)] label_eval_counter: [(0, 469), (1, 251)] varieties_classification_8k: seq_for_item: 1 seq_key: sequence label_key: label eval_task: labels data_split: ['train', 'test','eval'] sample_num: 300013 min_length: 8000 max_length: 8000 dataset_ratio: [0.8, 0.1, 0.1] varieties_classification_32k: seq_for_item: 1 seq_key: sequence label_key: label eval_task: labels data_split: ['train', 'test','eval'] sample_num: 149906 min_length: 32000 max_length: 32000 dataset_ratio: [0.8, 0.1, 0.1] varieties_classification_128k: seq_for_item: 1 seq_key: sequence label_key: label eval_task: labels data_split: ['train', 'test','eval'] sample_num: 149474 min_length: 128000 max_length: 128000 dataset_ratio: [0.8, 0.1, 0.1]