{ "files": [ { "comparable_keys": 10485, "label_counts": {}, "path": "carbon/source-mix-windows.jsonl", "records": 20000, "sha256": "sha256:66e924d75f0090141fa9f587eed34d7a6a80f23e0436bcecc817dd54f28d4129", "size_bytes": 84215725, "split": "train_carbon" }, { "comparable_keys": 1118, "label_counts": {}, "path": "gnomad/v4.1/variants.parquet", "records": 1118, "sha256": "sha256:49db46b995b54cfe65280653e7b00dc7c6022d053c15e6819d7a5c18615f0b8d", "size_bytes": 48694, "split": "train_gnomad_common" }, { "comparable_keys": 976, "label_counts": {}, "path": "placed/gnomad-common-windows.jsonl", "records": 976, "sha256": "sha256:ec76046771a163fbc22f326df26e2a332767eaa045dd919718c1cf86c4fbe0ac", "size_bytes": 4186560, "split": "train_placed_gnomad_common" }, { "comparable_keys": 4315200, "label_counts": { "B": 202286, "LB": 1124417, "LP": 150056, "OTHER": 409873, "P": 173544, "VUS": 2255024 }, "path": "clinvar/2026-04-15/variants.parquet", "records": 4315200, "sha256": "sha256:4d690346cdade5113a722f9f72cbe4781bd74ee41c6313a3d04d990a02209e3f", "size_bytes": 62502357, "split": "eval_clinvar" } ], "generated_at": "2026-06-05T09:35:13Z", "generated_by": "tools.release.dataset_integrity", "leakage_checks": [ { "examples": [], "failure_reason": "", "name": "no_shared_comparable_keys_between_train_and_eval", "overlap_count": 0, "split_a": "train_carbon", "split_a_comparable_keys": 10485, "split_b": "eval_clinvar", "split_b_comparable_keys": 4315200, "status": "passed" }, { "examples": [], "failure_reason": "", "name": "no_shared_comparable_keys_between_train_and_eval", "overlap_count": 0, "split_a": "train_gnomad_common", "split_a_comparable_keys": 1118, "split_b": "eval_clinvar", "split_b_comparable_keys": 4315200, "status": "passed" }, { "examples": [], "failure_reason": "", "name": "no_shared_comparable_keys_between_train_and_eval", "overlap_count": 0, "split_a": "train_placed_gnomad_common", "split_a_comparable_keys": 976, "split_b": "eval_clinvar", "split_b_comparable_keys": 4315200, "status": "passed" } ], "manifest_sha256": "sha256:c3aa8f22b79e76fa5b6e3a43e02675cfc02d56dc7dc9fa36128c81874537016c", "schema_version": "1.0.0", "snapshot_id": "geno-lewm-data-v0.1.0-r1", "splits": { "eval_clinvar": { "declared_records": 4315200, "description": "held-out ClinVar SNV labels for first-experiment evaluation", "files": [ "clinvar/2026-04-15/variants.parquet" ], "label_counts": { "B": 202286, "LB": 1124417, "LP": 150056, "OTHER": 409873, "P": 173544, "VUS": 2255024 }, "labelled_records": 4315200, "observed_records": 4315200, "unlabelled_records": 0 }, "train_carbon": { "declared_records": 20000, "description": "Carbon source-mix genomic windows for representation and transition training", "files": [ "carbon/source-mix-windows.jsonl" ], "label_counts": {}, "labelled_records": 0, "observed_records": 20000, "unlabelled_records": 20000 }, "train_gnomad_common": { "declared_records": 1118, "description": "gnomAD common SNVs for edit sampling and common-variant context", "files": [ "gnomad/v4.1/variants.parquet" ], "label_counts": {}, "labelled_records": 0, "observed_records": 1118, "unlabelled_records": 1118 }, "train_placed_gnomad_common": { "declared_records": 976, "description": "reference-placed chr22 windows generated from gnomAD common variants for real-coordinate training", "files": [ "placed/gnomad-common-windows.jsonl" ], "label_counts": {}, "labelled_records": 0, "observed_records": 976, "unlabelled_records": 976 } } }