Datasets:
File size: 9,687 Bytes
083d6a5 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 | {
"name": "refbook",
"version": "0.1.0",
"created": "2026-10-30",
"description": "GRCh38 roots, layers and reproduced flavor recipes",
"files": {
"roots.parquet": {
"bytes": 170203,
"sha256": "b707ece6bf4a7b0fd8dfb47d8dfec59f8b7f2fcaa2cc24415680a4e6af6e4e2f",
"role": "roots"
},
"roots_external.parquet": {
"bytes": 49224,
"sha256": "92210bb7d1846e85d72ba3d94fe9e7a2a5539d8e0ca7e8c1a06e2ec07d2da340",
"role": "roots"
},
"root_blocks.parquet": {
"bytes": 940938111,
"sha256": "66530cc830967e43e31ccf109412e6a73f3bc8657cbc8c8acfb3d2c7529f68e2",
"role": "bases"
},
"assembly_members.parquet": {
"bytes": 50947,
"sha256": "ec88247877222ea4b9e00da5f015229865603b24c760a8a3c689705e9067e547",
"role": "assemblies"
},
"aliases.parquet": {
"bytes": 60299,
"sha256": "cfd899e631250cb8b2b5b5c9db1fa14a3fdf93fac0581b03aefe3c29c496d6c2",
"role": "aliases"
},
"layer_agp.parquet": {
"bytes": 1105983,
"sha256": "e067007a2432a751bc80fa3a7e8bfc50eb16ae9a149716eb824b123d0401544a",
"role": "layer"
},
"layer_regions.parquet": {
"bytes": 9272,
"sha256": "39d2cc96d045d1a3a9a48878a66f1d1e681429de5020fa441494b29ed18b6df5",
"role": "layer"
},
"layer_placements.parquet": {
"bytes": 19768,
"sha256": "f9f01fcaec50b290ffbe754910806b9c76d0eb6f4f427d65d7a5a2f68a62dd48",
"role": "layer"
},
"layer_hardmask_grc.parquet": {
"bytes": 3992,
"sha256": "44a241ab0404e672a12710dacfea7d0143e9bac29a9fa94c77456274f8cea5c9",
"role": "layer"
},
"layer_iupac.parquet": {
"bytes": 1585,
"sha256": "303b91aa8fb88373d9bf01d078b3d297d4528473eb73080b237576ddcb6341b6",
"role": "layer"
},
"layer_n_runs.parquet": {
"bytes": 12527,
"sha256": "8f3b36d86875d5a791025d430c133e224c3ac8799179a2c33a33271ca7e8a46a",
"role": "layer"
},
"layer_softmask_ncbi.parquet": {
"bytes": 70366465,
"sha256": "21c186a5dee02f4da1fc529f94495c412633d08dc587b00460f16c9a22adc6ed",
"role": "layer"
},
"recipes.parquet": {
"bytes": 13208,
"sha256": "07b49e59172ba05a4976bcdd8556ea80cbe1e177574163040cb81733087d330b",
"role": "flavors"
},
"flavor_sequences.parquet": {
"bytes": 284792,
"sha256": "aad71c798dd5ba718388277b5c8ba488b6b7f710418aec465b86cbdaaf37d112",
"role": "flavors"
},
"family_tree.json": {
"bytes": 36384,
"sha256": "57d1cba11a00e1177d4edbf80c93d544a0536bc0aea124c4cea3ae3241b1a9f4",
"role": "flavors"
},
"seqcol/1000G_GRCh38_full_analysis_set_plus_decoy_hla.json": {
"bytes": 241763,
"sha256": "62165f80b786e84bcff3ebdce1b09ff8697b5f96dc52eb2856eae708cf9faa2d",
"role": "seqcol"
},
"seqcol/Broad_Homo_sapiens_assembly38.json": {
"bytes": 241763,
"sha256": "62165f80b786e84bcff3ebdce1b09ff8697b5f96dc52eb2856eae708cf9faa2d",
"role": "seqcol"
},
"seqcol/Ensembl116_primary_assembly.json": {
"bytes": 11505,
"sha256": "ba71f02e7bc53a2dd46b2fff2e0860bc1319f92b2f9c909bfb753062ca2618f2",
"role": "seqcol"
},
"seqcol/Ensembl116_toplevel.json": {
"bytes": 45252,
"sha256": "26c57b057e05a477beb905561a3d7bcb4338bdb19cac8138e62d83cfcf1ecd05",
"role": "seqcol"
},
"seqcol/GENCODE50_p14.json": {
"bytes": 42779,
"sha256": "bb274a6618fdac31b0ffc48f6544123fbfee6ae7367d37f68db731c8e374ccf6",
"role": "seqcol"
},
"seqcol/GENCODE50_primary_assembly.json": {
"bytes": 11579,
"sha256": "ffd695a41faa63487598444d9326c7fcd3a70e1c995fc8bb2dc73b005699beaf",
"role": "seqcol"
},
"seqcol/GRCh38_full_analysis_set.json": {
"bytes": 31334,
"sha256": "d8dfc719ab8e0b801bc283cd8f24948db021ca8e8c3bf44c93dd9040fdc50469",
"role": "seqcol"
},
"seqcol/GRCh38_full_plus_hs38d1_analysis_set.json": {
"bytes": 208687,
"sha256": "1d9ce2befd9a0be8058d1ca97ff1c57f746f0cff3e397fa58779f9fe20963209",
"role": "seqcol"
},
"seqcol/GRCh38_no_alt_analysis_set.json": {
"bytes": 12925,
"sha256": "df33738663ac49639a951895410bd247e52398077123ab1df6c30499b0a02e25",
"role": "seqcol"
},
"seqcol/GRCh38_no_alt_plus_hs38d1_analysis_set.json": {
"bytes": 190278,
"sha256": "8afd3a004e8d3028b27dceb6de82193bdb8d56575a3a242d623ff4d3d5275fdb",
"role": "seqcol"
},
"seqcol/UCSC_hg38.analysisSet.json": {
"bytes": 12925,
"sha256": "61bcc4b882b4e783423e799c497990a37d7b71e2efa4341e11a2633435d64b36",
"role": "seqcol"
},
"seqcol/UCSC_hg38.json": {
"bytes": 31277,
"sha256": "ad8ad7b78431f8789a217346ac09a373af630691f213d81d29521890b4d423e8",
"role": "seqcol"
},
"seqcol/UCSC_hg38.p14.json": {
"bytes": 49301,
"sha256": "42da25f00dd8c23d401220cc59ed0a04085438c25f5b5d178bf5ef6cfee9a52c",
"role": "seqcol"
},
"seqcol/iGenomes_GATK_GRCh38.json": {
"bytes": 241763,
"sha256": "62165f80b786e84bcff3ebdce1b09ff8697b5f96dc52eb2856eae708cf9faa2d",
"role": "seqcol"
},
"seqcol/iGenomes_NCBI_GRCh38.json": {
"bytes": 12925,
"sha256": "df33738663ac49639a951895410bd247e52398077123ab1df6c30499b0a02e25",
"role": "seqcol"
},
"seqcol/iGenomes_NCBI_GRCh38Decoy.json": {
"bytes": 161658,
"sha256": "61508375816d8572d86067a6f6a85874d69e2e9484497a6706f56e2351d241ea",
"role": "seqcol"
},
"seqcol/iGenomes_UCSC_hg38.json": {
"bytes": 12925,
"sha256": "61bcc4b882b4e783423e799c497990a37d7b71e2efa4341e11a2633435d64b36",
"role": "seqcol"
},
"evidence/observed/1000G_GRCh38_full_analysis_set_plus_decoy_hla.parquet": {
"bytes": 245769,
"sha256": "39819d8ce92c5d62561081d54e5e932c54c4fc7a58b610c77bc3bf36403ada57",
"role": "evidence"
},
"evidence/observed/Broad_Homo_sapiens_assembly38.dict.parquet": {
"bytes": 246598,
"sha256": "b2eff9853e6785247a81a9b39e26b0c02342527a05386ac413631b4df4f18c41",
"role": "evidence"
},
"evidence/observed/Broad_Homo_sapiens_assembly38.parquet": {
"bytes": 338647,
"sha256": "d167b74b119c37cdd5f6996d61a1757285d56fd4302fa645840fe13ab94d2684",
"role": "evidence"
},
"evidence/observed/Ensembl116_primary_assembly.parquet": {
"bytes": 16349,
"sha256": "ed00b70a03d1d9f3b1711a1becf728b7e0f42ec5f44febd89dacaf76eea65f21",
"role": "evidence"
},
"evidence/observed/Ensembl116_toplevel.parquet": {
"bytes": 52854,
"sha256": "4acebabac64961e3a793c2d0b758cc197bd7bb4d0a146f8e6447240c2a36a462",
"role": "evidence"
},
"evidence/observed/GENCODE50_p14.parquet": {
"bytes": 47973,
"sha256": "a62e68f8be8ddaa179d9af22256e3efd79884f32d7f6a35a30354babd0bbaba5",
"role": "evidence"
},
"evidence/observed/GENCODE50_primary_assembly.parquet": {
"bytes": 14961,
"sha256": "ce043b7068fbfe3b92a6faa6b0115d318435a510b33db9d634f52a58229388fb",
"role": "evidence"
},
"evidence/observed/GRCh38_full_analysis_set.parquet": {
"bytes": 57518,
"sha256": "2d6f5ca6816512900285226a8f7b924630b983648d86d3c9de646273b625af21",
"role": "evidence"
},
"evidence/observed/GRCh38_full_plus_hs38d1_analysis_set.parquet": {
"bytes": 297340,
"sha256": "e176c4948a4ccc6d34b066db588982518afed090f7b461ce9470e46eca78bce7",
"role": "evidence"
},
"evidence/observed/GRCh38_no_alt_analysis_set.parquet": {
"bytes": 25693,
"sha256": "ed900775fd190ef109285d41938c3202c67201b44712891ed0430dc5a6c748d8",
"role": "evidence"
},
"evidence/observed/GRCh38_no_alt_plus_hs38d1_analysis_set.parquet": {
"bytes": 263294,
"sha256": "875cb169e40546b22ae712ec4fcd3cf57220b55c36816ca6fb2715e2d44b6a9a",
"role": "evidence"
},
"evidence/observed/UCSC_hg38.analysisSet.parquet": {
"bytes": 16032,
"sha256": "593063e7914f1a721d140427a498e9c2bc06b5ea8f41e2734b12d0fdb61501a8",
"role": "evidence"
},
"evidence/observed/UCSC_hg38.p14.parquet": {
"bytes": 50480,
"sha256": "b4ed6cd571bfe5b103735c4f3e3f3cf9e1e26d7e9a9f85f9b9b1d36cf9eaeb83",
"role": "evidence"
},
"evidence/observed/UCSC_hg38.parquet": {
"bytes": 33242,
"sha256": "7d9c09717e6bc9ebd31be22bd4d655012f44f64c0999b92eced26f75ee410dce",
"role": "evidence"
},
"evidence/observed/iGenomes_GATK_GRCh38.parquet": {
"bytes": 246598,
"sha256": "a517555e819da7437fcd962ceccb05ca0be0392cbc72fb9b0e2c1eb4d3fc386b",
"role": "evidence"
},
"evidence/observed/iGenomes_NCBI_GRCh38.parquet": {
"bytes": 18315,
"sha256": "14ce137fe85526c29247cbaf31541a4def8e3d51d6d4d982765d6291b5b1edb8",
"role": "evidence"
},
"evidence/observed/iGenomes_NCBI_GRCh38Decoy.parquet": {
"bytes": 181841,
"sha256": "0ee10de3ab128f7fcc872111e25dbae9b30067e0983f0b59a2351620fdae3519",
"role": "evidence"
},
"evidence/observed/iGenomes_UCSC_hg38.parquet": {
"bytes": 18427,
"sha256": "336e72ad45782e3b88d4bc381908fa27fa02bf1660f5c9040fbd4db67af423a5",
"role": "evidence"
},
"evidence/verify_roots.tsv": {
"bytes": 190210,
"sha256": "4db3fe8e7c979239be77c0794794730d1be716791db8adf43cc1369e9b4eaaa7",
"role": "evidence"
},
"evidence/check_gaps.tsv": {
"bytes": 14857,
"sha256": "85f40e866935aecaca107bb8d32725b313af3fff5ce9fd4ca7d9dc0c4995f8a2",
"role": "evidence"
}
}
}
|