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| #ifndef EIGEN_PASTIXSUPPORT_H |
| #define EIGEN_PASTIXSUPPORT_H |
|
|
| namespace Eigen { |
|
|
| #if defined(DCOMPLEX) |
| #define PASTIX_COMPLEX COMPLEX |
| #define PASTIX_DCOMPLEX DCOMPLEX |
| #else |
| #define PASTIX_COMPLEX std::complex<float> |
| #define PASTIX_DCOMPLEX std::complex<double> |
| #endif |
|
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| |
| |
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| |
| |
| template<typename _MatrixType, bool IsStrSym = false> class PastixLU; |
| template<typename _MatrixType, int Options> class PastixLLT; |
| template<typename _MatrixType, int Options> class PastixLDLT; |
|
|
| namespace internal |
| { |
| |
| template<class Pastix> struct pastix_traits; |
|
|
| template<typename _MatrixType> |
| struct pastix_traits< PastixLU<_MatrixType> > |
| { |
| typedef _MatrixType MatrixType; |
| typedef typename _MatrixType::Scalar Scalar; |
| typedef typename _MatrixType::RealScalar RealScalar; |
| typedef typename _MatrixType::StorageIndex StorageIndex; |
| }; |
|
|
| template<typename _MatrixType, int Options> |
| struct pastix_traits< PastixLLT<_MatrixType,Options> > |
| { |
| typedef _MatrixType MatrixType; |
| typedef typename _MatrixType::Scalar Scalar; |
| typedef typename _MatrixType::RealScalar RealScalar; |
| typedef typename _MatrixType::StorageIndex StorageIndex; |
| }; |
|
|
| template<typename _MatrixType, int Options> |
| struct pastix_traits< PastixLDLT<_MatrixType,Options> > |
| { |
| typedef _MatrixType MatrixType; |
| typedef typename _MatrixType::Scalar Scalar; |
| typedef typename _MatrixType::RealScalar RealScalar; |
| typedef typename _MatrixType::StorageIndex StorageIndex; |
| }; |
| |
| inline void eigen_pastix(pastix_data_t **pastix_data, int pastix_comm, int n, int *ptr, int *idx, float *vals, int *perm, int * invp, float *x, int nbrhs, int *iparm, double *dparm) |
| { |
| if (n == 0) { ptr = NULL; idx = NULL; vals = NULL; } |
| if (nbrhs == 0) {x = NULL; nbrhs=1;} |
| s_pastix(pastix_data, pastix_comm, n, ptr, idx, vals, perm, invp, x, nbrhs, iparm, dparm); |
| } |
| |
| inline void eigen_pastix(pastix_data_t **pastix_data, int pastix_comm, int n, int *ptr, int *idx, double *vals, int *perm, int * invp, double *x, int nbrhs, int *iparm, double *dparm) |
| { |
| if (n == 0) { ptr = NULL; idx = NULL; vals = NULL; } |
| if (nbrhs == 0) {x = NULL; nbrhs=1;} |
| d_pastix(pastix_data, pastix_comm, n, ptr, idx, vals, perm, invp, x, nbrhs, iparm, dparm); |
| } |
| |
| inline void eigen_pastix(pastix_data_t **pastix_data, int pastix_comm, int n, int *ptr, int *idx, std::complex<float> *vals, int *perm, int * invp, std::complex<float> *x, int nbrhs, int *iparm, double *dparm) |
| { |
| if (n == 0) { ptr = NULL; idx = NULL; vals = NULL; } |
| if (nbrhs == 0) {x = NULL; nbrhs=1;} |
| c_pastix(pastix_data, pastix_comm, n, ptr, idx, reinterpret_cast<PASTIX_COMPLEX*>(vals), perm, invp, reinterpret_cast<PASTIX_COMPLEX*>(x), nbrhs, iparm, dparm); |
| } |
| |
| inline void eigen_pastix(pastix_data_t **pastix_data, int pastix_comm, int n, int *ptr, int *idx, std::complex<double> *vals, int *perm, int * invp, std::complex<double> *x, int nbrhs, int *iparm, double *dparm) |
| { |
| if (n == 0) { ptr = NULL; idx = NULL; vals = NULL; } |
| if (nbrhs == 0) {x = NULL; nbrhs=1;} |
| z_pastix(pastix_data, pastix_comm, n, ptr, idx, reinterpret_cast<PASTIX_DCOMPLEX*>(vals), perm, invp, reinterpret_cast<PASTIX_DCOMPLEX*>(x), nbrhs, iparm, dparm); |
| } |
|
|
| |
| template <typename MatrixType> |
| void c_to_fortran_numbering (MatrixType& mat) |
| { |
| if ( !(mat.outerIndexPtr()[0]) ) |
| { |
| int i; |
| for(i = 0; i <= mat.rows(); ++i) |
| ++mat.outerIndexPtr()[i]; |
| for(i = 0; i < mat.nonZeros(); ++i) |
| ++mat.innerIndexPtr()[i]; |
| } |
| } |
| |
| |
| template <typename MatrixType> |
| void fortran_to_c_numbering (MatrixType& mat) |
| { |
| |
| if ( mat.outerIndexPtr()[0] == 1 ) |
| { |
| int i; |
| for(i = 0; i <= mat.rows(); ++i) |
| --mat.outerIndexPtr()[i]; |
| for(i = 0; i < mat.nonZeros(); ++i) |
| --mat.innerIndexPtr()[i]; |
| } |
| } |
| } |
|
|
| |
| |
| template <class Derived> |
| class PastixBase : public SparseSolverBase<Derived> |
| { |
| protected: |
| typedef SparseSolverBase<Derived> Base; |
| using Base::derived; |
| using Base::m_isInitialized; |
| public: |
| using Base::_solve_impl; |
| |
| typedef typename internal::pastix_traits<Derived>::MatrixType _MatrixType; |
| typedef _MatrixType MatrixType; |
| typedef typename MatrixType::Scalar Scalar; |
| typedef typename MatrixType::RealScalar RealScalar; |
| typedef typename MatrixType::StorageIndex StorageIndex; |
| typedef Matrix<Scalar,Dynamic,1> Vector; |
| typedef SparseMatrix<Scalar, ColMajor> ColSpMatrix; |
| enum { |
| ColsAtCompileTime = MatrixType::ColsAtCompileTime, |
| MaxColsAtCompileTime = MatrixType::MaxColsAtCompileTime |
| }; |
| |
| public: |
| |
| PastixBase() : m_initisOk(false), m_analysisIsOk(false), m_factorizationIsOk(false), m_pastixdata(0), m_size(0) |
| { |
| init(); |
| } |
| |
| ~PastixBase() |
| { |
| clean(); |
| } |
| |
| template<typename Rhs,typename Dest> |
| bool _solve_impl(const MatrixBase<Rhs> &b, MatrixBase<Dest> &x) const; |
| |
| |
| |
| |
| |
| |
| Array<StorageIndex,IPARM_SIZE,1>& iparm() |
| { |
| return m_iparm; |
| } |
| |
| |
| |
| |
| |
| int& iparm(int idxparam) |
| { |
| return m_iparm(idxparam); |
| } |
| |
| |
| |
| |
| |
| Array<double,DPARM_SIZE,1>& dparm() |
| { |
| return m_dparm; |
| } |
| |
| |
| |
| |
| |
| double& dparm(int idxparam) |
| { |
| return m_dparm(idxparam); |
| } |
| |
| inline Index cols() const { return m_size; } |
| inline Index rows() const { return m_size; } |
| |
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| |
| ComputationInfo info() const |
| { |
| eigen_assert(m_isInitialized && "Decomposition is not initialized."); |
| return m_info; |
| } |
| |
| protected: |
|
|
| |
| void init(); |
| |
| |
| void analyzePattern(ColSpMatrix& mat); |
| |
| |
| void factorize(ColSpMatrix& mat); |
| |
| |
| void clean() |
| { |
| eigen_assert(m_initisOk && "The Pastix structure should be allocated first"); |
| m_iparm(IPARM_START_TASK) = API_TASK_CLEAN; |
| m_iparm(IPARM_END_TASK) = API_TASK_CLEAN; |
| internal::eigen_pastix(&m_pastixdata, MPI_COMM_WORLD, 0, 0, 0, (Scalar*)0, |
| m_perm.data(), m_invp.data(), 0, 0, m_iparm.data(), m_dparm.data()); |
| } |
| |
| void compute(ColSpMatrix& mat); |
| |
| int m_initisOk; |
| int m_analysisIsOk; |
| int m_factorizationIsOk; |
| mutable ComputationInfo m_info; |
| mutable pastix_data_t *m_pastixdata; |
| mutable int m_comm; |
| mutable Array<int,IPARM_SIZE,1> m_iparm; |
| mutable Array<double,DPARM_SIZE,1> m_dparm; |
| mutable Matrix<StorageIndex,Dynamic,1> m_perm; |
| mutable Matrix<StorageIndex,Dynamic,1> m_invp; |
| mutable int m_size; |
| }; |
|
|
| |
| |
| |
| |
| template <class Derived> |
| void PastixBase<Derived>::init() |
| { |
| m_size = 0; |
| m_iparm.setZero(IPARM_SIZE); |
| m_dparm.setZero(DPARM_SIZE); |
| |
| m_iparm(IPARM_MODIFY_PARAMETER) = API_NO; |
| pastix(&m_pastixdata, MPI_COMM_WORLD, |
| 0, 0, 0, 0, |
| 0, 0, 0, 1, m_iparm.data(), m_dparm.data()); |
| |
| m_iparm[IPARM_MATRIX_VERIFICATION] = API_NO; |
| m_iparm[IPARM_VERBOSE] = API_VERBOSE_NOT; |
| m_iparm[IPARM_ORDERING] = API_ORDER_SCOTCH; |
| m_iparm[IPARM_INCOMPLETE] = API_NO; |
| m_iparm[IPARM_OOC_LIMIT] = 2000; |
| m_iparm[IPARM_RHS_MAKING] = API_RHS_B; |
| m_iparm(IPARM_MATRIX_VERIFICATION) = API_NO; |
| |
| m_iparm(IPARM_START_TASK) = API_TASK_INIT; |
| m_iparm(IPARM_END_TASK) = API_TASK_INIT; |
| internal::eigen_pastix(&m_pastixdata, MPI_COMM_WORLD, 0, 0, 0, (Scalar*)0, |
| 0, 0, 0, 0, m_iparm.data(), m_dparm.data()); |
| |
| |
| if(m_iparm(IPARM_ERROR_NUMBER)) { |
| m_info = InvalidInput; |
| m_initisOk = false; |
| } |
| else { |
| m_info = Success; |
| m_initisOk = true; |
| } |
| } |
|
|
| template <class Derived> |
| void PastixBase<Derived>::compute(ColSpMatrix& mat) |
| { |
| eigen_assert(mat.rows() == mat.cols() && "The input matrix should be squared"); |
| |
| analyzePattern(mat); |
| factorize(mat); |
| |
| m_iparm(IPARM_MATRIX_VERIFICATION) = API_NO; |
| } |
|
|
|
|
| template <class Derived> |
| void PastixBase<Derived>::analyzePattern(ColSpMatrix& mat) |
| { |
| eigen_assert(m_initisOk && "The initialization of PaSTiX failed"); |
| |
| |
| if(m_size>0) |
| clean(); |
| |
| m_size = internal::convert_index<int>(mat.rows()); |
| m_perm.resize(m_size); |
| m_invp.resize(m_size); |
| |
| m_iparm(IPARM_START_TASK) = API_TASK_ORDERING; |
| m_iparm(IPARM_END_TASK) = API_TASK_ANALYSE; |
| internal::eigen_pastix(&m_pastixdata, MPI_COMM_WORLD, m_size, mat.outerIndexPtr(), mat.innerIndexPtr(), |
| mat.valuePtr(), m_perm.data(), m_invp.data(), 0, 0, m_iparm.data(), m_dparm.data()); |
| |
| |
| if(m_iparm(IPARM_ERROR_NUMBER)) |
| { |
| m_info = NumericalIssue; |
| m_analysisIsOk = false; |
| } |
| else |
| { |
| m_info = Success; |
| m_analysisIsOk = true; |
| } |
| } |
|
|
| template <class Derived> |
| void PastixBase<Derived>::factorize(ColSpMatrix& mat) |
| { |
| |
| eigen_assert(m_analysisIsOk && "The analysis phase should be called before the factorization phase"); |
| m_iparm(IPARM_START_TASK) = API_TASK_NUMFACT; |
| m_iparm(IPARM_END_TASK) = API_TASK_NUMFACT; |
| m_size = internal::convert_index<int>(mat.rows()); |
| |
| internal::eigen_pastix(&m_pastixdata, MPI_COMM_WORLD, m_size, mat.outerIndexPtr(), mat.innerIndexPtr(), |
| mat.valuePtr(), m_perm.data(), m_invp.data(), 0, 0, m_iparm.data(), m_dparm.data()); |
| |
| |
| if(m_iparm(IPARM_ERROR_NUMBER)) |
| { |
| m_info = NumericalIssue; |
| m_factorizationIsOk = false; |
| m_isInitialized = false; |
| } |
| else |
| { |
| m_info = Success; |
| m_factorizationIsOk = true; |
| m_isInitialized = true; |
| } |
| } |
|
|
| |
| template<typename Base> |
| template<typename Rhs,typename Dest> |
| bool PastixBase<Base>::_solve_impl(const MatrixBase<Rhs> &b, MatrixBase<Dest> &x) const |
| { |
| eigen_assert(m_isInitialized && "The matrix should be factorized first"); |
| EIGEN_STATIC_ASSERT((Dest::Flags&RowMajorBit)==0, |
| THIS_METHOD_IS_ONLY_FOR_COLUMN_MAJOR_MATRICES); |
| int rhs = 1; |
| |
| x = b; |
| |
| for (int i = 0; i < b.cols(); i++){ |
| m_iparm[IPARM_START_TASK] = API_TASK_SOLVE; |
| m_iparm[IPARM_END_TASK] = API_TASK_REFINE; |
| |
| internal::eigen_pastix(&m_pastixdata, MPI_COMM_WORLD, internal::convert_index<int>(x.rows()), 0, 0, 0, |
| m_perm.data(), m_invp.data(), &x(0, i), rhs, m_iparm.data(), m_dparm.data()); |
| } |
| |
| |
| m_info = m_iparm(IPARM_ERROR_NUMBER)==0 ? Success : NumericalIssue; |
| |
| return m_iparm(IPARM_ERROR_NUMBER)==0; |
| } |
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| template<typename _MatrixType, bool IsStrSym> |
| class PastixLU : public PastixBase< PastixLU<_MatrixType> > |
| { |
| public: |
| typedef _MatrixType MatrixType; |
| typedef PastixBase<PastixLU<MatrixType> > Base; |
| typedef typename Base::ColSpMatrix ColSpMatrix; |
| typedef typename MatrixType::StorageIndex StorageIndex; |
| |
| public: |
| PastixLU() : Base() |
| { |
| init(); |
| } |
| |
| explicit PastixLU(const MatrixType& matrix):Base() |
| { |
| init(); |
| compute(matrix); |
| } |
| |
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| void compute (const MatrixType& matrix) |
| { |
| m_structureIsUptodate = false; |
| ColSpMatrix temp; |
| grabMatrix(matrix, temp); |
| Base::compute(temp); |
| } |
| |
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| void analyzePattern(const MatrixType& matrix) |
| { |
| m_structureIsUptodate = false; |
| ColSpMatrix temp; |
| grabMatrix(matrix, temp); |
| Base::analyzePattern(temp); |
| } |
|
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| void factorize(const MatrixType& matrix) |
| { |
| ColSpMatrix temp; |
| grabMatrix(matrix, temp); |
| Base::factorize(temp); |
| } |
| protected: |
| |
| void init() |
| { |
| m_structureIsUptodate = false; |
| m_iparm(IPARM_SYM) = API_SYM_NO; |
| m_iparm(IPARM_FACTORIZATION) = API_FACT_LU; |
| } |
| |
| void grabMatrix(const MatrixType& matrix, ColSpMatrix& out) |
| { |
| if(IsStrSym) |
| out = matrix; |
| else |
| { |
| if(!m_structureIsUptodate) |
| { |
| |
| m_transposedStructure = matrix.transpose(); |
| |
| |
| for (Index j=0; j<m_transposedStructure.outerSize(); ++j) |
| for(typename ColSpMatrix::InnerIterator it(m_transposedStructure, j); it; ++it) |
| it.valueRef() = 0.0; |
|
|
| m_structureIsUptodate = true; |
| } |
| |
| out = m_transposedStructure + matrix; |
| } |
| internal::c_to_fortran_numbering(out); |
| } |
| |
| using Base::m_iparm; |
| using Base::m_dparm; |
| |
| ColSpMatrix m_transposedStructure; |
| bool m_structureIsUptodate; |
| }; |
|
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| template<typename _MatrixType, int _UpLo> |
| class PastixLLT : public PastixBase< PastixLLT<_MatrixType, _UpLo> > |
| { |
| public: |
| typedef _MatrixType MatrixType; |
| typedef PastixBase<PastixLLT<MatrixType, _UpLo> > Base; |
| typedef typename Base::ColSpMatrix ColSpMatrix; |
| |
| public: |
| enum { UpLo = _UpLo }; |
| PastixLLT() : Base() |
| { |
| init(); |
| } |
| |
| explicit PastixLLT(const MatrixType& matrix):Base() |
| { |
| init(); |
| compute(matrix); |
| } |
|
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| void compute (const MatrixType& matrix) |
| { |
| ColSpMatrix temp; |
| grabMatrix(matrix, temp); |
| Base::compute(temp); |
| } |
|
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| void analyzePattern(const MatrixType& matrix) |
| { |
| ColSpMatrix temp; |
| grabMatrix(matrix, temp); |
| Base::analyzePattern(temp); |
| } |
| |
| |
| |
| void factorize(const MatrixType& matrix) |
| { |
| ColSpMatrix temp; |
| grabMatrix(matrix, temp); |
| Base::factorize(temp); |
| } |
| protected: |
| using Base::m_iparm; |
| |
| void init() |
| { |
| m_iparm(IPARM_SYM) = API_SYM_YES; |
| m_iparm(IPARM_FACTORIZATION) = API_FACT_LLT; |
| } |
| |
| void grabMatrix(const MatrixType& matrix, ColSpMatrix& out) |
| { |
| out.resize(matrix.rows(), matrix.cols()); |
| |
| out.template selfadjointView<Lower>() = matrix.template selfadjointView<UpLo>(); |
| internal::c_to_fortran_numbering(out); |
| } |
| }; |
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| template<typename _MatrixType, int _UpLo> |
| class PastixLDLT : public PastixBase< PastixLDLT<_MatrixType, _UpLo> > |
| { |
| public: |
| typedef _MatrixType MatrixType; |
| typedef PastixBase<PastixLDLT<MatrixType, _UpLo> > Base; |
| typedef typename Base::ColSpMatrix ColSpMatrix; |
| |
| public: |
| enum { UpLo = _UpLo }; |
| PastixLDLT():Base() |
| { |
| init(); |
| } |
| |
| explicit PastixLDLT(const MatrixType& matrix):Base() |
| { |
| init(); |
| compute(matrix); |
| } |
|
|
| |
| |
| |
| void compute (const MatrixType& matrix) |
| { |
| ColSpMatrix temp; |
| grabMatrix(matrix, temp); |
| Base::compute(temp); |
| } |
|
|
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| void analyzePattern(const MatrixType& matrix) |
| { |
| ColSpMatrix temp; |
| grabMatrix(matrix, temp); |
| Base::analyzePattern(temp); |
| } |
| |
| |
| |
| void factorize(const MatrixType& matrix) |
| { |
| ColSpMatrix temp; |
| grabMatrix(matrix, temp); |
| Base::factorize(temp); |
| } |
|
|
| protected: |
| using Base::m_iparm; |
| |
| void init() |
| { |
| m_iparm(IPARM_SYM) = API_SYM_YES; |
| m_iparm(IPARM_FACTORIZATION) = API_FACT_LDLT; |
| } |
| |
| void grabMatrix(const MatrixType& matrix, ColSpMatrix& out) |
| { |
| |
| out.resize(matrix.rows(), matrix.cols()); |
| out.template selfadjointView<Lower>() = matrix.template selfadjointView<UpLo>(); |
| internal::c_to_fortran_numbering(out); |
| } |
| }; |
|
|
| } |
|
|
| #endif |
|
|