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#ifndef EIGEN_PASTIXSUPPORT_H |
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#define EIGEN_PASTIXSUPPORT_H |
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namespace Eigen { |
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#if defined(DCOMPLEX) |
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#define PASTIX_COMPLEX COMPLEX |
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#define PASTIX_DCOMPLEX DCOMPLEX |
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#else |
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#define PASTIX_COMPLEX std::complex<float> |
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#define PASTIX_DCOMPLEX std::complex<double> |
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#endif |
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template<typename _MatrixType, bool IsStrSym = false> class PastixLU; |
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template<typename _MatrixType, int Options> class PastixLLT; |
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template<typename _MatrixType, int Options> class PastixLDLT; |
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namespace internal |
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{ |
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template<class Pastix> struct pastix_traits; |
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template<typename _MatrixType> |
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struct pastix_traits< PastixLU<_MatrixType> > |
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{ |
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typedef _MatrixType MatrixType; |
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typedef typename _MatrixType::Scalar Scalar; |
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typedef typename _MatrixType::RealScalar RealScalar; |
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typedef typename _MatrixType::StorageIndex StorageIndex; |
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}; |
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template<typename _MatrixType, int Options> |
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struct pastix_traits< PastixLLT<_MatrixType,Options> > |
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{ |
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typedef _MatrixType MatrixType; |
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typedef typename _MatrixType::Scalar Scalar; |
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typedef typename _MatrixType::RealScalar RealScalar; |
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typedef typename _MatrixType::StorageIndex StorageIndex; |
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}; |
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template<typename _MatrixType, int Options> |
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struct pastix_traits< PastixLDLT<_MatrixType,Options> > |
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{ |
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typedef _MatrixType MatrixType; |
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typedef typename _MatrixType::Scalar Scalar; |
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typedef typename _MatrixType::RealScalar RealScalar; |
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typedef typename _MatrixType::StorageIndex StorageIndex; |
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}; |
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inline void eigen_pastix(pastix_data_t **pastix_data, int pastix_comm, int n, int *ptr, int *idx, float *vals, int *perm, int * invp, float *x, int nbrhs, int *iparm, double *dparm) |
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{ |
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if (n == 0) { ptr = NULL; idx = NULL; vals = NULL; } |
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if (nbrhs == 0) {x = NULL; nbrhs=1;} |
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s_pastix(pastix_data, pastix_comm, n, ptr, idx, vals, perm, invp, x, nbrhs, iparm, dparm); |
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} |
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inline void eigen_pastix(pastix_data_t **pastix_data, int pastix_comm, int n, int *ptr, int *idx, double *vals, int *perm, int * invp, double *x, int nbrhs, int *iparm, double *dparm) |
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{ |
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if (n == 0) { ptr = NULL; idx = NULL; vals = NULL; } |
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if (nbrhs == 0) {x = NULL; nbrhs=1;} |
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d_pastix(pastix_data, pastix_comm, n, ptr, idx, vals, perm, invp, x, nbrhs, iparm, dparm); |
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} |
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inline void eigen_pastix(pastix_data_t **pastix_data, int pastix_comm, int n, int *ptr, int *idx, std::complex<float> *vals, int *perm, int * invp, std::complex<float> *x, int nbrhs, int *iparm, double *dparm) |
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{ |
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if (n == 0) { ptr = NULL; idx = NULL; vals = NULL; } |
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if (nbrhs == 0) {x = NULL; nbrhs=1;} |
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c_pastix(pastix_data, pastix_comm, n, ptr, idx, reinterpret_cast<PASTIX_COMPLEX*>(vals), perm, invp, reinterpret_cast<PASTIX_COMPLEX*>(x), nbrhs, iparm, dparm); |
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} |
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inline void eigen_pastix(pastix_data_t **pastix_data, int pastix_comm, int n, int *ptr, int *idx, std::complex<double> *vals, int *perm, int * invp, std::complex<double> *x, int nbrhs, int *iparm, double *dparm) |
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{ |
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if (n == 0) { ptr = NULL; idx = NULL; vals = NULL; } |
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if (nbrhs == 0) {x = NULL; nbrhs=1;} |
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z_pastix(pastix_data, pastix_comm, n, ptr, idx, reinterpret_cast<PASTIX_DCOMPLEX*>(vals), perm, invp, reinterpret_cast<PASTIX_DCOMPLEX*>(x), nbrhs, iparm, dparm); |
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} |
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template <typename MatrixType> |
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void c_to_fortran_numbering (MatrixType& mat) |
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{ |
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if ( !(mat.outerIndexPtr()[0]) ) |
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{ |
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int i; |
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for(i = 0; i <= mat.rows(); ++i) |
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++mat.outerIndexPtr()[i]; |
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for(i = 0; i < mat.nonZeros(); ++i) |
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++mat.innerIndexPtr()[i]; |
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} |
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} |
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template <typename MatrixType> |
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void fortran_to_c_numbering (MatrixType& mat) |
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{ |
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if ( mat.outerIndexPtr()[0] == 1 ) |
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{ |
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int i; |
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for(i = 0; i <= mat.rows(); ++i) |
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--mat.outerIndexPtr()[i]; |
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for(i = 0; i < mat.nonZeros(); ++i) |
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--mat.innerIndexPtr()[i]; |
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} |
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} |
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} |
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template <class Derived> |
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class PastixBase : public SparseSolverBase<Derived> |
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{ |
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protected: |
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typedef SparseSolverBase<Derived> Base; |
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using Base::derived; |
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using Base::m_isInitialized; |
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public: |
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using Base::_solve_impl; |
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typedef typename internal::pastix_traits<Derived>::MatrixType _MatrixType; |
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typedef _MatrixType MatrixType; |
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typedef typename MatrixType::Scalar Scalar; |
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typedef typename MatrixType::RealScalar RealScalar; |
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typedef typename MatrixType::StorageIndex StorageIndex; |
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typedef Matrix<Scalar,Dynamic,1> Vector; |
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typedef SparseMatrix<Scalar, ColMajor> ColSpMatrix; |
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enum { |
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ColsAtCompileTime = MatrixType::ColsAtCompileTime, |
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MaxColsAtCompileTime = MatrixType::MaxColsAtCompileTime |
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}; |
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public: |
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PastixBase() : m_initisOk(false), m_analysisIsOk(false), m_factorizationIsOk(false), m_pastixdata(0), m_size(0) |
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{ |
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init(); |
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} |
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~PastixBase() |
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{ |
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clean(); |
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} |
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template<typename Rhs,typename Dest> |
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bool _solve_impl(const MatrixBase<Rhs> &b, MatrixBase<Dest> &x) const; |
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Array<StorageIndex,IPARM_SIZE,1>& iparm() |
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{ |
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return m_iparm; |
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} |
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int& iparm(int idxparam) |
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{ |
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return m_iparm(idxparam); |
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} |
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Array<double,DPARM_SIZE,1>& dparm() |
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{ |
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return m_dparm; |
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} |
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double& dparm(int idxparam) |
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{ |
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return m_dparm(idxparam); |
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} |
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inline Index cols() const { return m_size; } |
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inline Index rows() const { return m_size; } |
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ComputationInfo info() const |
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{ |
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eigen_assert(m_isInitialized && "Decomposition is not initialized."); |
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return m_info; |
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} |
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protected: |
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void init(); |
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void analyzePattern(ColSpMatrix& mat); |
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void factorize(ColSpMatrix& mat); |
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void clean() |
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{ |
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eigen_assert(m_initisOk && "The Pastix structure should be allocated first"); |
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m_iparm(IPARM_START_TASK) = API_TASK_CLEAN; |
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m_iparm(IPARM_END_TASK) = API_TASK_CLEAN; |
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internal::eigen_pastix(&m_pastixdata, MPI_COMM_WORLD, 0, 0, 0, (Scalar*)0, |
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m_perm.data(), m_invp.data(), 0, 0, m_iparm.data(), m_dparm.data()); |
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} |
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void compute(ColSpMatrix& mat); |
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int m_initisOk; |
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int m_analysisIsOk; |
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int m_factorizationIsOk; |
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mutable ComputationInfo m_info; |
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mutable pastix_data_t *m_pastixdata; |
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mutable int m_comm; |
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mutable Array<int,IPARM_SIZE,1> m_iparm; |
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mutable Array<double,DPARM_SIZE,1> m_dparm; |
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mutable Matrix<StorageIndex,Dynamic,1> m_perm; |
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mutable Matrix<StorageIndex,Dynamic,1> m_invp; |
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mutable int m_size; |
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}; |
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template <class Derived> |
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void PastixBase<Derived>::init() |
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{ |
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m_size = 0; |
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m_iparm.setZero(IPARM_SIZE); |
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m_dparm.setZero(DPARM_SIZE); |
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m_iparm(IPARM_MODIFY_PARAMETER) = API_NO; |
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pastix(&m_pastixdata, MPI_COMM_WORLD, |
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0, 0, 0, 0, |
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0, 0, 0, 1, m_iparm.data(), m_dparm.data()); |
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m_iparm[IPARM_MATRIX_VERIFICATION] = API_NO; |
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m_iparm[IPARM_VERBOSE] = API_VERBOSE_NOT; |
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m_iparm[IPARM_ORDERING] = API_ORDER_SCOTCH; |
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m_iparm[IPARM_INCOMPLETE] = API_NO; |
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m_iparm[IPARM_OOC_LIMIT] = 2000; |
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m_iparm[IPARM_RHS_MAKING] = API_RHS_B; |
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m_iparm(IPARM_MATRIX_VERIFICATION) = API_NO; |
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m_iparm(IPARM_START_TASK) = API_TASK_INIT; |
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m_iparm(IPARM_END_TASK) = API_TASK_INIT; |
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internal::eigen_pastix(&m_pastixdata, MPI_COMM_WORLD, 0, 0, 0, (Scalar*)0, |
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0, 0, 0, 0, m_iparm.data(), m_dparm.data()); |
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if(m_iparm(IPARM_ERROR_NUMBER)) { |
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m_info = InvalidInput; |
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m_initisOk = false; |
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} |
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else { |
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m_info = Success; |
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m_initisOk = true; |
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} |
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} |
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template <class Derived> |
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void PastixBase<Derived>::compute(ColSpMatrix& mat) |
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{ |
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eigen_assert(mat.rows() == mat.cols() && "The input matrix should be squared"); |
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analyzePattern(mat); |
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factorize(mat); |
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m_iparm(IPARM_MATRIX_VERIFICATION) = API_NO; |
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} |
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template <class Derived> |
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void PastixBase<Derived>::analyzePattern(ColSpMatrix& mat) |
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{ |
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eigen_assert(m_initisOk && "The initialization of PaSTiX failed"); |
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if(m_size>0) |
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clean(); |
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m_size = internal::convert_index<int>(mat.rows()); |
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m_perm.resize(m_size); |
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m_invp.resize(m_size); |
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m_iparm(IPARM_START_TASK) = API_TASK_ORDERING; |
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m_iparm(IPARM_END_TASK) = API_TASK_ANALYSE; |
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internal::eigen_pastix(&m_pastixdata, MPI_COMM_WORLD, m_size, mat.outerIndexPtr(), mat.innerIndexPtr(), |
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mat.valuePtr(), m_perm.data(), m_invp.data(), 0, 0, m_iparm.data(), m_dparm.data()); |
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if(m_iparm(IPARM_ERROR_NUMBER)) |
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{ |
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m_info = NumericalIssue; |
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m_analysisIsOk = false; |
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} |
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else |
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{ |
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m_info = Success; |
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m_analysisIsOk = true; |
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} |
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} |
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template <class Derived> |
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void PastixBase<Derived>::factorize(ColSpMatrix& mat) |
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{ |
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eigen_assert(m_analysisIsOk && "The analysis phase should be called before the factorization phase"); |
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m_iparm(IPARM_START_TASK) = API_TASK_NUMFACT; |
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m_iparm(IPARM_END_TASK) = API_TASK_NUMFACT; |
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m_size = internal::convert_index<int>(mat.rows()); |
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internal::eigen_pastix(&m_pastixdata, MPI_COMM_WORLD, m_size, mat.outerIndexPtr(), mat.innerIndexPtr(), |
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mat.valuePtr(), m_perm.data(), m_invp.data(), 0, 0, m_iparm.data(), m_dparm.data()); |
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if(m_iparm(IPARM_ERROR_NUMBER)) |
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{ |
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m_info = NumericalIssue; |
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m_factorizationIsOk = false; |
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m_isInitialized = false; |
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} |
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else |
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{ |
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m_info = Success; |
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m_factorizationIsOk = true; |
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m_isInitialized = true; |
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} |
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} |
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template<typename Base> |
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template<typename Rhs,typename Dest> |
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bool PastixBase<Base>::_solve_impl(const MatrixBase<Rhs> &b, MatrixBase<Dest> &x) const |
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{ |
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eigen_assert(m_isInitialized && "The matrix should be factorized first"); |
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EIGEN_STATIC_ASSERT((Dest::Flags&RowMajorBit)==0, |
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THIS_METHOD_IS_ONLY_FOR_COLUMN_MAJOR_MATRICES); |
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int rhs = 1; |
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x = b; |
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for (int i = 0; i < b.cols(); i++){ |
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m_iparm[IPARM_START_TASK] = API_TASK_SOLVE; |
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m_iparm[IPARM_END_TASK] = API_TASK_REFINE; |
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internal::eigen_pastix(&m_pastixdata, MPI_COMM_WORLD, internal::convert_index<int>(x.rows()), 0, 0, 0, |
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m_perm.data(), m_invp.data(), &x(0, i), rhs, m_iparm.data(), m_dparm.data()); |
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} |
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m_info = m_iparm(IPARM_ERROR_NUMBER)==0 ? Success : NumericalIssue; |
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return m_iparm(IPARM_ERROR_NUMBER)==0; |
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} |
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template<typename _MatrixType, bool IsStrSym> |
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class PastixLU : public PastixBase< PastixLU<_MatrixType> > |
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{ |
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public: |
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typedef _MatrixType MatrixType; |
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typedef PastixBase<PastixLU<MatrixType> > Base; |
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typedef typename Base::ColSpMatrix ColSpMatrix; |
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typedef typename MatrixType::StorageIndex StorageIndex; |
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public: |
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PastixLU() : Base() |
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{ |
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init(); |
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} |
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explicit PastixLU(const MatrixType& matrix):Base() |
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{ |
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init(); |
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compute(matrix); |
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} |
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void compute (const MatrixType& matrix) |
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{ |
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m_structureIsUptodate = false; |
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ColSpMatrix temp; |
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grabMatrix(matrix, temp); |
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Base::compute(temp); |
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} |
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void analyzePattern(const MatrixType& matrix) |
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{ |
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m_structureIsUptodate = false; |
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ColSpMatrix temp; |
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grabMatrix(matrix, temp); |
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Base::analyzePattern(temp); |
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} |
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void factorize(const MatrixType& matrix) |
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{ |
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ColSpMatrix temp; |
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grabMatrix(matrix, temp); |
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Base::factorize(temp); |
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} |
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protected: |
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void init() |
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{ |
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|
m_structureIsUptodate = false; |
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|
m_iparm(IPARM_SYM) = API_SYM_NO; |
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|
m_iparm(IPARM_FACTORIZATION) = API_FACT_LU; |
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} |
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void grabMatrix(const MatrixType& matrix, ColSpMatrix& out) |
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|
{ |
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if(IsStrSym) |
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|
out = matrix; |
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|
else |
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|
{ |
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if(!m_structureIsUptodate) |
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|
{ |
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m_transposedStructure = matrix.transpose(); |
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for (Index j=0; j<m_transposedStructure.outerSize(); ++j) |
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for(typename ColSpMatrix::InnerIterator it(m_transposedStructure, j); it; ++it) |
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it.valueRef() = 0.0; |
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m_structureIsUptodate = true; |
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} |
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out = m_transposedStructure + matrix; |
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} |
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|
internal::c_to_fortran_numbering(out); |
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} |
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using Base::m_iparm; |
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using Base::m_dparm; |
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ColSpMatrix m_transposedStructure; |
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bool m_structureIsUptodate; |
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}; |
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template<typename _MatrixType, int _UpLo> |
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class PastixLLT : public PastixBase< PastixLLT<_MatrixType, _UpLo> > |
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{ |
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public: |
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typedef _MatrixType MatrixType; |
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typedef PastixBase<PastixLLT<MatrixType, _UpLo> > Base; |
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typedef typename Base::ColSpMatrix ColSpMatrix; |
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public: |
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enum { UpLo = _UpLo }; |
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PastixLLT() : Base() |
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{ |
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init(); |
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} |
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explicit PastixLLT(const MatrixType& matrix):Base() |
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{ |
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init(); |
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compute(matrix); |
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} |
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void compute (const MatrixType& matrix) |
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{ |
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ColSpMatrix temp; |
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grabMatrix(matrix, temp); |
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Base::compute(temp); |
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} |
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void analyzePattern(const MatrixType& matrix) |
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{ |
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ColSpMatrix temp; |
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grabMatrix(matrix, temp); |
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Base::analyzePattern(temp); |
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} |
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void factorize(const MatrixType& matrix) |
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{ |
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ColSpMatrix temp; |
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grabMatrix(matrix, temp); |
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Base::factorize(temp); |
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} |
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protected: |
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using Base::m_iparm; |
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void init() |
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{ |
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m_iparm(IPARM_SYM) = API_SYM_YES; |
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m_iparm(IPARM_FACTORIZATION) = API_FACT_LLT; |
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} |
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void grabMatrix(const MatrixType& matrix, ColSpMatrix& out) |
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{ |
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out.resize(matrix.rows(), matrix.cols()); |
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out.template selfadjointView<Lower>() = matrix.template selfadjointView<UpLo>(); |
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internal::c_to_fortran_numbering(out); |
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} |
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}; |
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template<typename _MatrixType, int _UpLo> |
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class PastixLDLT : public PastixBase< PastixLDLT<_MatrixType, _UpLo> > |
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{ |
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public: |
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typedef _MatrixType MatrixType; |
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typedef PastixBase<PastixLDLT<MatrixType, _UpLo> > Base; |
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typedef typename Base::ColSpMatrix ColSpMatrix; |
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public: |
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enum { UpLo = _UpLo }; |
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PastixLDLT():Base() |
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{ |
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init(); |
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} |
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explicit PastixLDLT(const MatrixType& matrix):Base() |
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{ |
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init(); |
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compute(matrix); |
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} |
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void compute (const MatrixType& matrix) |
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{ |
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ColSpMatrix temp; |
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grabMatrix(matrix, temp); |
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Base::compute(temp); |
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} |
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void analyzePattern(const MatrixType& matrix) |
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{ |
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ColSpMatrix temp; |
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grabMatrix(matrix, temp); |
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Base::analyzePattern(temp); |
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} |
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void factorize(const MatrixType& matrix) |
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{ |
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ColSpMatrix temp; |
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grabMatrix(matrix, temp); |
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Base::factorize(temp); |
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} |
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protected: |
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using Base::m_iparm; |
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void init() |
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{ |
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m_iparm(IPARM_SYM) = API_SYM_YES; |
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m_iparm(IPARM_FACTORIZATION) = API_FACT_LDLT; |
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} |
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void grabMatrix(const MatrixType& matrix, ColSpMatrix& out) |
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{ |
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out.resize(matrix.rows(), matrix.cols()); |
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out.template selfadjointView<Lower>() = matrix.template selfadjointView<UpLo>(); |
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internal::c_to_fortran_numbering(out); |
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} |
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}; |
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} |
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#endif |
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