messages listlengths 3 3 | source stringlengths 0 122 | method stringlengths 0 172 |
|---|---|---|
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:23721268 | Logistic Regression |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:26664131 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:arxiv:2211.16116v1 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:gbif:d1afa46f-b17d-3a0b-95bb-2ecfd9d0b462 | DeepSDM with Transformer-based Habitat Distribution Model |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:arxiv:2310.17186v1 | Network Analysis |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:biorxiv:10.1101/2025.08.29.673018 | TimeSeriesAnalysis-DynamicInteractions |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:22471208 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:biorxiv:10.1101/2024.06.29.601333 | Nonlinear Evolutionary Models (NEM) |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | MaxEnt |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:25740225 | ANOVA with post-hoc tests |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:21535340 | Multiple Regression |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:24026826 | Geometric Morphometrics (GMM) |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:27851757 | Linear Regression |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | Tropical Ecology | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | Bayesian SSD (Species Sensitivity Distribution) |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | Database Migration Methodology (DMM) |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:biorxiv:10.1101/2020.01.01.891705 | Phylogenetic Clustering for LFTs |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:gbif:6777f6f9-a5e4-386f-b44d-5fe4e0e83e98 | Maxent |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | Web Ecology | Poisson Regression with Offset |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:31542562 | Comparative Morphometric Analysis with Statistical Inference |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:27008788 | Dynamic Occupancy Model with Neighbor Effects |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:biorxiv:10.1101/2023.06.30.547307 | Target Enrichment Sequencing using UCEs |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:arxiv:1906.09904v1 | Idealized Numerical Simulations with KPP Parameterization |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:32421556 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:arxiv:2203.05707v1 | Ensemble Feature Selection with Threshold-Based Classification |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | ODE-Based Adaptive Dynamics |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | Bayesian Optimal Control HMM |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:gbif:8e0b8400-9a87-31f9-95d8-f0d6fd657da4 | MaxEnt |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:25982549 | Bayesian Risk Analysis |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:25199542 | Hierarchical Model with Regression Analysis |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:biorxiv:10.1101/2020.10.29.327619 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | Bayesian Phylogenetic Analysis with Ancestral Area Estimation |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:26286667 | Bayesian Phylogeographic Inference |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | Scientific Reports | Occupancy Model with GLM |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:25075615 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:gbif:3bc17831-79d0-3484-98e5-b2bd292761e6 | Maxent |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:32470331 | Generalized Linear Model (GLM) combined with Diversity Analysis |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:biorxiv:10.64898/2026.03.30.715298 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | Annals of the Entomological Society of America | MaxEnt |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:gbif:4b71ac58-be90-3325-9dc2-d81979ae8af5 | Maxent |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:33909545 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:biorxiv:10.1101/2020.11.02.364596 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:biorxiv:10.1101/2023.11.28.568986 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:29176806 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:gbif:28dd61dd-e030-3ac9-b7e8-b9081e89661b | MaxEnt |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:gbif:5e4804a6-3f0d-317b-a529-f4b81383c843 | DAPC (Discriminant Analysis of Principal Components) |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:19683949 | Interaction Network Analysis |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:biorxiv:10.1101/2022.02.01.478068 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | Machine Learning for Emulsion Size Prediction |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:arxiv:2606.04551v1 | QBD Process |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:gbif:e630d080-2257-3bab-83e1-4d2fef6a1179 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:23891547 | Hidden Markov Model (HMM) |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:27002631 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:17257101 | Trait Decomposition Analysis (TDA) |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | Hidden Markov Model (HMM) |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:31509066 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:gbif:b985f315-270f-3e21-83c9-cf20f4162ee1 | Maxent |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:28725369 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:biorxiv:10.1101/2025.05.30.657092 | Logistic Regression |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | Forests | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:32895733 | Ecological Diversity Analysis |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:23236905 | Hidden Markov Models (HMM) and Extensions |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:gbif:5364deaf-71f5-3843-a7b1-5f295086502d | Pyrosequencing Analysis |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:27008774 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:arxiv:1909.02253v4 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | Hierarchical Bayesian Model |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:biorxiv:10.1101/2021.12.31.474647 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:26536842 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | System Validation and Model Perturbation |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:31695869 | Bayesian MCMC via JAGS |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:19285511 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:gbif:cb92001a-d396-3c5b-b6a8-0c290e4419aa | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:26815366 | Bray-Curtis Beta Diversity Analysis |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | PLSRegression |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:33617665 | Interrupted Time Series Analysis (ITS) |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:19937150 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | bioRxiv | Database Creation |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | MaxEnt |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:16979203 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | HSMM |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:31188494 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:26243248 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:30924730 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:31104597 | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:16204860 | Logistic Regression with Cost-Benefit Analysis |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:20380214 | Random Forests
Landscape Genetics |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:32806340 | PERMANOVA |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:24340185 | Hierarchical Nest Survival Model |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:28894157 | Species Distribution Models (SDM) |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:26725258 | MaxEnt (Maximum Entropy) |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:29120090 | Bayesian Multiscale Occupancy Model |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | Ecological Applications | |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:27029937 | Cross-classified random effects |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | BoostedRegressionTrees (BRT) |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | PubMed | Ancestral State Estimation with Bayesian Biogeography |
[
{
"role": "system",
"content": "You are an expert ecological modeler and scientific Python/R programmer.\nGiven a paper's title and abstract, generate a Chain-of-Thought trace for fine-tuning an AI model on ecological reasoning.\n\nOutput ONLY a JSON object with these exact keys:\n{\n \"paper_pmid\": \"the... | pubmed:27283305 | StochasticSimulation |
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