from __future__ import annotations """ Dynamic k-NN Graph Construction (DGCNN-style). Core idea — "dynamic" graph: At every layer the graph is rebuilt based on the *current* feature space, NOT just the initial (x, y) coordinates. Layer 1: neighbours = physically close minutiae (embedding ≈ projected coords) Layer L: neighbours = *semantically* similar minutiae (learned features) → two minutiae far apart spatially can become neighbours if their learned representations are similar. Graph⁽ˡ⁾: N(i) = KNN(hᵢ⁽ˡ⁾, {hⱼ⁽ˡ⁾}ⱼ₌₁ᴺ, k) This enables the model to discover semantic similarity beyond spatial proximity as depth increases — a key advantage over static graph approaches. Exported API: knn(x, k, mask, metric) → (B, N, k) neighbour indices gather_neighbours(x, idx) → (B, N, k, D) gathered features graph_divergence(idx_a, idx_b, mask) → (B,) mean Jaccard distance per sample """ import torch def knn( x: torch.Tensor, k: int, mask: torch.Tensor | None = None, metric: str = "euclidean", ) -> torch.Tensor: """Compute k-nearest-neighbour indices in feature space. Args: x: (B, N, D) point features — the current layer's representation. k: number of neighbours (including self). mask: (B, N) bool — True for real minutiae, False for padding. Padded points are pushed infinitely far away so they are never chosen as neighbours. metric: ``"euclidean"`` or ``"cosine"`` distance. Returns: idx: (B, N, k) indices of the k nearest neighbours per node. """ # Push padded positions to infinity so they're never nearest if mask is not None: large = torch.finfo(x.dtype).max / 2 x = x.masked_fill(~mask.unsqueeze(-1), large) if metric == "cosine": x_norm = torch.nn.functional.normalize(x, dim=-1) sim = torch.bmm(x_norm, x_norm.transpose(1, 2)) # (B, N, N) _, idx = sim.topk(k, dim=-1, largest=True) else: # Squared Euclidean: ||a−b||² = ||a||² + ||b||² − 2⟨a,b⟩ inner = torch.bmm(x, x.transpose(1, 2)) # (B, N, N) xx = (x * x).sum(dim=-1, keepdim=True) # (B, N, 1) dist = xx + xx.transpose(1, 2) - 2.0 * inner # (B, N, N) _, idx = dist.topk(k, dim=-1, largest=False) # smallest dist return idx def graph_divergence( idx_a: torch.Tensor, idx_b: torch.Tensor, mask: torch.Tensor | None = None, ) -> torch.Tensor: """Measure how much the k-NN graph changed between two layers. For each node i, computes Jaccard distance between its neighbour sets: divergence(i) = 1 − |N_a(i) ∩ N_b(i)| / |N_a(i) ∪ N_b(i)| Returns the mean divergence per sample in the batch. Args: idx_a: (B, N, k) — neighbour indices from layer l. idx_b: (B, N, k) — neighbour indices from layer l+1. mask: (B, N) bool — True for real minutiae. Padded nodes excluded. Returns: div: (B,) — mean Jaccard distance per sample (0 = identical, 1 = disjoint). """ B, N, k = idx_a.shape # Convert neighbour indices to one-hot sets for intersection/union # (B, N, k) → (B, N, N) binary adjacency via scatter def _to_adj(idx: torch.Tensor) -> torch.Tensor: adj = torch.zeros(B, N, N, device=idx.device, dtype=torch.float32) src = torch.ones_like(idx, dtype=torch.float32) adj.scatter_(2, idx, src) return adj adj_a = _to_adj(idx_a) # (B, N, N) adj_b = _to_adj(idx_b) intersection = (adj_a * adj_b).sum(dim=-1) # (B, N) union = ((adj_a + adj_b) > 0).float().sum(dim=-1) # (B, N) jaccard = intersection / union.clamp(min=1.0) # (B, N) divergence = 1.0 - jaccard # (B, N) if mask is not None: divergence = divergence * mask.float() div_per_sample = divergence.sum(dim=-1) / mask.float().sum(dim=-1).clamp(min=1.0) else: div_per_sample = divergence.mean(dim=-1) return div_per_sample # (B,) def gather_neighbours( x: torch.Tensor, idx: torch.Tensor, ) -> torch.Tensor: """Gather features of k neighbours for every node. Args: x: (B, N, D) — node features (any dimension). idx: (B, N, k) — neighbour indices from :func:`knn`. Returns: out: (B, N, k, D) — neighbour features per node. """ B, N, D = x.shape k = idx.shape[-1] idx_exp = idx.unsqueeze(-1).expand(B, N, k, D) # (B, N, k, D) x_exp = x.unsqueeze(1).expand(B, N, N, D) # (B, N, N, D) return torch.gather(x_exp, 2, idx_exp) # (B, N, k, D)