Update IBDColEpi.py

IBDColEpi.py

@@ -11,9 +11,6 @@
 # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 # See the License for the specific language governing permissions and
 # limitations under the License.
-# TODO: Address all TODOs and remove all explanatory comments
-"""TODO: Add a description here."""
-
 
 import csv
 import json
@@ -22,7 +19,6 @@ import os
 import datasets
 
 
-# TODO: Add BibTeX citation
 # Find for instance the citation on arxiv or on the dataset repo/website
 _CITATION = """\
 @ARTICLE{10.3389/fmed.2021.816281,
@@ -38,19 +34,14 @@ ABSTRACT={Application of deep learning on histopathological whole slide images (
 }
 """
 
-# TODO: Add description of the dataset here
-# You can copy an official description
 _DESCRIPTION = """\
 IBDColEpi: 140 HE and 111 CD3-stained colon biopsies of active and inactivate inflammatory bowel disease with epithelium annotated.
 """
 
-# TODO: Add a link to an official homepage for the dataset here
 _HOMEPAGE = "https://github.com/andreped/NoCodeSeg"
 
-# TODO: Add the licence for the dataset here if you can find it
 _LICENSE = "MIT"
 
-# TODO: Add link to the official dataset URLs here
 # The HuggingFace Datasets library doesn't host the datasets but only points to the original files.
 # This can be an arbitrary nested dict/list of URLs (see below in `_split_generators` method)
 base_path = "https://huggingface.co/datasets/andreped/IBDColEpi/resolve/main/"
@@ -58,7 +49,6 @@ _URLS = {"part_0" + str(x): base_path + "WSI_part_0" + str(x) + ".zip" for x in
 _URLS["part_10"] = base_path + "WSI_part_10.zip"
 _URLS["wsi-annotations"] = base_path + "TIFF-annotations.zip"
 
-# TODO: Name of the dataset usually matches the script name with CamelCase instead of snake_case
 class IBDColEpi(datasets.GeneratorBasedBuilder):
     """140 HE and 111 CD3-stained colon biopsies of active and inactivate inflammatory bowel disease with epithelium annotated."""
 
@@ -91,7 +81,6 @@ class IBDColEpi(datasets.GeneratorBasedBuilder):
         self.DATA_DIR = None
 
     def _info(self):
-        # TODO: This method specifies the datasets.DatasetInfo object which contains informations and typings for the dataset
         if self.config.name.startswith("part"):  # This is the name of the configuration selected in BUILDER_CONFIGS above
             features = datasets.Features(
                 {
@@ -130,7 +119,7 @@ class IBDColEpi(datasets.GeneratorBasedBuilder):
         return self.DATA_DIR
     
     def _split_generators(self, dl_manager):
-        # TODO: This method is tasked with downloading/extracting the data and defining the splits depending on the configuration
+        # This method is tasked with downloading/extracting the data and defining the splits depending on the configuration
         # If several configurations are possible (listed in BUILDER_CONFIGS), the configuration selected by the user is in self.config.name
 
         # dl_manager is a datasets.download.DownloadManager that can be used to download and extract URLS
@@ -139,8 +128,6 @@ class IBDColEpi(datasets.GeneratorBasedBuilder):
         urls = _URLS[self.config.name]
         self.DATA_DIR = dl_manager.download_and_extract(urls)
 
-        # @TODO: use custom data downloader instead because DataverseNO is trash
-
         # append AeroPath
         # self.DATA_DIR = os.path.join(self.DATA_DIR, "IBDColEpi")