Datasets:
Update README.md
Browse files
README.md
CHANGED
|
@@ -547,7 +547,7 @@ size_categories:
|
|
| 547 |
|
| 548 |
# CAFA 5
|
| 549 |
|
| 550 |
-
This is the [CAFA 5](https://www.kaggle.com/competitions/cafa-5-protein-function-prediction) dataset of 142k protein sequences annotated with their gene ontology (GO) terms
|
| 551 |
|
| 552 |
The code to export this dataset can be found [here](https://github.com/andrewdalpino/CAFA5).
|
| 553 |
|
|
|
|
| 547 |
|
| 548 |
# CAFA 5
|
| 549 |
|
| 550 |
+
This is the [CAFA 5](https://www.kaggle.com/competitions/cafa-5-protein-function-prediction) dataset of 142k protein sequences annotated with their gene ontology (GO) terms. The samples are divided into three subsets each containing a set of GO terms that are associated with one of the three subgraphs of the gene ontology - Molecular Function, Biological Process, and Cellular Component. In addition, we provide a stratified train/test split that utilizes term embeddings to distribute term labels equally. The term embeddings are included in the dataset and can be used to stratify custom splits or to search for sequences with similar gene ontologies.
|
| 551 |
|
| 552 |
The code to export this dataset can be found [here](https://github.com/andrewdalpino/CAFA5).
|
| 553 |
|