| """Wrappers for forwarding stdout/stderr over zmq""" |
|
|
| |
| |
|
|
| import asyncio |
| import atexit |
| import contextvars |
| import io |
| import os |
| import sys |
| import threading |
| import traceback |
| import warnings |
| from binascii import b2a_hex |
| from collections import defaultdict, deque |
| from collections.abc import Callable |
| from io import StringIO, TextIOBase |
| from threading import local |
| from typing import Any |
|
|
| import zmq |
| from jupyter_client.session import extract_header |
| from tornado.ioloop import IOLoop |
| from zmq.eventloop.zmqstream import ZMQStream |
|
|
| |
| |
| |
|
|
| MASTER = 0 |
| CHILD = 1 |
|
|
| PIPE_BUFFER_SIZE = 1000 |
|
|
| |
| |
| |
|
|
|
|
| class IOPubThread: |
| """An object for sending IOPub messages in a background thread |
| |
| Prevents a blocking main thread from delaying output from threads. |
| |
| IOPubThread(pub_socket).background_socket is a Socket-API-providing object |
| whose IO is always run in a thread. |
| """ |
|
|
| def __init__(self, socket, pipe=False): |
| """Create IOPub thread |
| |
| Parameters |
| ---------- |
| socket : zmq.PUB Socket |
| the socket on which messages will be sent. |
| pipe : bool |
| Whether this process should listen for IOPub messages |
| piped from subprocesses. |
| """ |
| self.socket = socket |
| self._stopped = False |
| self.background_socket = BackgroundSocket(self) |
| self._master_pid = os.getpid() |
| self._pipe_flag = pipe |
| self.io_loop = IOLoop(make_current=False) |
| if pipe: |
| self._setup_pipe_in() |
| self._local = threading.local() |
| self._events: deque[Callable[..., Any]] = deque() |
| self._event_pipes: dict[threading.Thread, Any] = {} |
| self._event_pipe_gc_lock: threading.Lock = threading.Lock() |
| self._event_pipe_gc_seconds: float = 10 |
| self._event_pipe_gc_task: asyncio.Task[Any] | None = None |
| self._setup_event_pipe() |
| self.thread = threading.Thread(target=self._thread_main, name="IOPub") |
| self.thread.daemon = True |
| self.thread.pydev_do_not_trace = True |
| self.thread.is_pydev_daemon_thread = True |
| self.thread.name = "IOPub" |
|
|
| def _thread_main(self): |
| """The inner loop that's actually run in a thread""" |
|
|
| def _start_event_gc(): |
| self._event_pipe_gc_task = asyncio.ensure_future(self._run_event_pipe_gc()) |
|
|
| self.io_loop.run_sync(_start_event_gc) |
|
|
| if not self._stopped: |
| |
| |
| self.io_loop.start() |
|
|
| if self._event_pipe_gc_task is not None: |
| |
| async def _cancel(): |
| self._event_pipe_gc_task.cancel() |
|
|
| if not self._stopped: |
| self.io_loop.run_sync(_cancel) |
| else: |
| self._event_pipe_gc_task.cancel() |
|
|
| self.io_loop.close(all_fds=True) |
|
|
| def _setup_event_pipe(self): |
| """Create the PULL socket listening for events that should fire in this thread.""" |
| ctx = self.socket.context |
| pipe_in = ctx.socket(zmq.PULL) |
| pipe_in.linger = 0 |
|
|
| _uuid = b2a_hex(os.urandom(16)).decode("ascii") |
| iface = self._event_interface = "inproc://%s" % _uuid |
| pipe_in.bind(iface) |
| self._event_puller = ZMQStream(pipe_in, self.io_loop) |
| self._event_puller.on_recv(self._handle_event) |
|
|
| async def _run_event_pipe_gc(self): |
| """Task to run event pipe gc continuously""" |
| while True: |
| await asyncio.sleep(self._event_pipe_gc_seconds) |
| try: |
| await self._event_pipe_gc() |
| except Exception as e: |
| print(f"Exception in IOPubThread._event_pipe_gc: {e}", file=sys.__stderr__) |
|
|
| async def _event_pipe_gc(self): |
| """run a single garbage collection on event pipes""" |
| if not self._event_pipes: |
| |
| return |
| with self._event_pipe_gc_lock: |
| for thread, socket in list(self._event_pipes.items()): |
| if not thread.is_alive(): |
| socket.close() |
| del self._event_pipes[thread] |
|
|
| @property |
| def _event_pipe(self): |
| """thread-local event pipe for signaling events that should be processed in the thread""" |
| try: |
| event_pipe = self._local.event_pipe |
| except AttributeError: |
| |
| ctx = self.socket.context |
| event_pipe = ctx.socket(zmq.PUSH) |
| event_pipe.linger = 0 |
| event_pipe.connect(self._event_interface) |
| self._local.event_pipe = event_pipe |
| |
| |
| |
| with self._event_pipe_gc_lock: |
| self._event_pipes[threading.current_thread()] = event_pipe |
| return event_pipe |
|
|
| def _handle_event(self, msg): |
| """Handle an event on the event pipe |
| |
| Content of the message is ignored. |
| |
| Whenever *an* event arrives on the event stream, |
| *all* waiting events are processed in order. |
| """ |
| |
| |
| n_events = len(self._events) |
| for _ in range(n_events): |
| event_f = self._events.popleft() |
| event_f() |
|
|
| def _setup_pipe_in(self): |
| """setup listening pipe for IOPub from forked subprocesses""" |
| ctx = self.socket.context |
|
|
| |
| self._pipe_uuid = os.urandom(16) |
|
|
| pipe_in = ctx.socket(zmq.PULL) |
| pipe_in.linger = 0 |
|
|
| try: |
| self._pipe_port = pipe_in.bind_to_random_port("tcp://127.0.0.1") |
| except zmq.ZMQError as e: |
| warnings.warn( |
| "Couldn't bind IOPub Pipe to 127.0.0.1: %s" % e |
| + "\nsubprocess output will be unavailable.", |
| stacklevel=2, |
| ) |
| self._pipe_flag = False |
| pipe_in.close() |
| return |
| self._pipe_in = ZMQStream(pipe_in, self.io_loop) |
| self._pipe_in.on_recv(self._handle_pipe_msg) |
|
|
| def _handle_pipe_msg(self, msg): |
| """handle a pipe message from a subprocess""" |
| if not self._pipe_flag or not self._is_master_process(): |
| return |
| if msg[0] != self._pipe_uuid: |
| print("Bad pipe message: %s", msg, file=sys.__stderr__) |
| return |
| self.send_multipart(msg[1:]) |
|
|
| def _setup_pipe_out(self): |
| |
| ctx = zmq.Context() |
| pipe_out = ctx.socket(zmq.PUSH) |
| pipe_out.linger = 3000 |
| pipe_out.connect("tcp://127.0.0.1:%i" % self._pipe_port) |
| return ctx, pipe_out |
|
|
| def _is_master_process(self): |
| return os.getpid() == self._master_pid |
|
|
| def _check_mp_mode(self): |
| """check for forks, and switch to zmq pipeline if necessary""" |
| if not self._pipe_flag or self._is_master_process(): |
| return MASTER |
| return CHILD |
|
|
| def start(self): |
| """Start the IOPub thread""" |
| self.thread.name = "IOPub" |
| self.thread.start() |
| |
| |
| atexit.register(self.stop) |
|
|
| def stop(self): |
| """Stop the IOPub thread""" |
| self._stopped = True |
| if not self.thread.is_alive(): |
| return |
| self.io_loop.add_callback(self.io_loop.stop) |
|
|
| self.thread.join(timeout=30) |
| if self.thread.is_alive(): |
| |
| msg = "IOPub thread did not terminate in 30 seconds" |
| raise TimeoutError(msg) |
| |
| |
| |
| for _thread, event_pipe in self._event_pipes.items(): |
| event_pipe.close() |
|
|
| def close(self): |
| """Close the IOPub thread.""" |
| if self.closed: |
| return |
| self.socket.close() |
| self.socket = None |
|
|
| @property |
| def closed(self): |
| return self.socket is None |
|
|
| def schedule(self, f): |
| """Schedule a function to be called in our IO thread. |
| |
| If the thread is not running, call immediately. |
| """ |
| if self.thread.is_alive(): |
| self._events.append(f) |
| |
| self._event_pipe.send(b"") |
| else: |
| f() |
|
|
| def send_multipart(self, *args, **kwargs): |
| """send_multipart schedules actual zmq send in my thread. |
| |
| If my thread isn't running (e.g. forked process), send immediately. |
| """ |
| self.schedule(lambda: self._really_send(*args, **kwargs)) |
|
|
| def _really_send(self, msg, *args, **kwargs): |
| """The callback that actually sends messages""" |
| if self.closed: |
| return |
|
|
| mp_mode = self._check_mp_mode() |
|
|
| if mp_mode != CHILD: |
| |
| self.socket.send_multipart(msg, *args, **kwargs) |
| else: |
| |
| |
| |
| ctx, pipe_out = self._setup_pipe_out() |
| pipe_out.send_multipart([self._pipe_uuid, *msg], *args, **kwargs) |
| pipe_out.close() |
| ctx.term() |
|
|
|
|
| class BackgroundSocket: |
| """Wrapper around IOPub thread that provides zmq send[_multipart]""" |
|
|
| io_thread = None |
|
|
| def __init__(self, io_thread): |
| """Initialize the socket.""" |
| self.io_thread = io_thread |
|
|
| def __getattr__(self, attr): |
| """Wrap socket attr access for backward-compatibility""" |
| if attr.startswith("__") and attr.endswith("__"): |
| |
| super().__getattr__(attr) |
| assert self.io_thread is not None |
| if hasattr(self.io_thread.socket, attr): |
| warnings.warn( |
| f"Accessing zmq Socket attribute {attr} on BackgroundSocket" |
| f" is deprecated since ipykernel 4.3.0" |
| f" use .io_thread.socket.{attr}", |
| DeprecationWarning, |
| stacklevel=2, |
| ) |
| return getattr(self.io_thread.socket, attr) |
| return super().__getattr__(attr) |
|
|
| def __setattr__(self, attr, value): |
| """Set an attribute on the socket.""" |
| if attr == "io_thread" or (attr.startswith("__") and attr.endswith("__")): |
| super().__setattr__(attr, value) |
| else: |
| warnings.warn( |
| f"Setting zmq Socket attribute {attr} on BackgroundSocket" |
| f" is deprecated since ipykernel 4.3.0" |
| f" use .io_thread.socket.{attr}", |
| DeprecationWarning, |
| stacklevel=2, |
| ) |
| assert self.io_thread is not None |
| setattr(self.io_thread.socket, attr, value) |
|
|
| def send(self, msg, *args, **kwargs): |
| """Send a message to the socket.""" |
| return self.send_multipart([msg], *args, **kwargs) |
|
|
| def send_multipart(self, *args, **kwargs): |
| """Schedule send in IO thread""" |
| assert self.io_thread is not None |
| return self.io_thread.send_multipart(*args, **kwargs) |
|
|
|
|
| class OutStream(TextIOBase): |
| """A file like object that publishes the stream to a 0MQ PUB socket. |
| |
| Output is handed off to an IO Thread |
| """ |
|
|
| |
| |
| flush_timeout = 10 |
| |
| flush_interval = 0.2 |
| topic = None |
| encoding = "UTF-8" |
| _exc: Any | None = None |
|
|
| def fileno(self): |
| """ |
| Things like subprocess will peak and write to the fileno() of stderr/stdout. |
| """ |
| if getattr(self, "_original_stdstream_copy", None) is not None: |
| return self._original_stdstream_copy |
| msg = "fileno" |
| raise io.UnsupportedOperation(msg) |
|
|
| def _watch_pipe_fd(self): |
| """ |
| We've redirected standards streams 0 and 1 into a pipe. |
| |
| We need to watch in a thread and redirect them to the right places. |
| |
| 1) the ZMQ channels to show in notebook interfaces, |
| 2) the original stdout/err, to capture errors in terminals. |
| |
| We cannot schedule this on the ioloop thread, as this might be blocking. |
| |
| """ |
|
|
| if self._fid is None: |
| return |
|
|
| try: |
| bts = os.read(self._fid, PIPE_BUFFER_SIZE) |
| while bts and self._should_watch: |
| self.write(bts.decode(errors="replace")) |
| os.write(self._original_stdstream_copy, bts) |
| bts = os.read(self._fid, PIPE_BUFFER_SIZE) |
| except Exception: |
| self._exc = sys.exc_info() |
|
|
| def __init__( |
| self, |
| session, |
| pub_thread, |
| name, |
| pipe=None, |
| echo=None, |
| *, |
| watchfd=True, |
| isatty=False, |
| ): |
| """ |
| Parameters |
| ---------- |
| session : object |
| the session object |
| pub_thread : threading.Thread |
| the publication thread |
| name : str {'stderr', 'stdout'} |
| the name of the standard stream to replace |
| pipe : object |
| the pipe object |
| echo : bool |
| whether to echo output |
| watchfd : bool (default, True) |
| Watch the file descriptor corresponding to the replaced stream. |
| This is useful if you know some underlying code will write directly |
| the file descriptor by its number. It will spawn a watching thread, |
| that will swap the give file descriptor for a pipe, read from the |
| pipe, and insert this into the current Stream. |
| isatty : bool (default, False) |
| Indication of whether this stream has terminal capabilities (e.g. can handle colors) |
| |
| """ |
| if pipe is not None: |
| warnings.warn( |
| "pipe argument to OutStream is deprecated and ignored since ipykernel 4.2.3.", |
| DeprecationWarning, |
| stacklevel=2, |
| ) |
| |
| self.session = session |
| self._fid = None |
| if not isinstance(pub_thread, IOPubThread): |
| |
| warnings.warn( |
| "Since IPykernel 4.3, OutStream should be created with " |
| "IOPubThread, not %r" % pub_thread, |
| DeprecationWarning, |
| stacklevel=2, |
| ) |
| pub_thread = IOPubThread(pub_thread) |
| pub_thread.start() |
| self.pub_thread = pub_thread |
| self.name = name |
| self.topic = b"stream." + name.encode() |
| self._parent_header: contextvars.ContextVar[dict[str, Any]] = contextvars.ContextVar( |
| "parent_header" |
| ) |
| self._parent_header.set({}) |
| self._parent_header_global = {} |
| self._master_pid = os.getpid() |
| self._flush_pending = False |
| self._subprocess_flush_pending = False |
| self._io_loop = pub_thread.io_loop |
| self._buffer_lock = threading.RLock() |
| self._buffers = defaultdict(StringIO) |
| self.echo = None |
| self._isatty = bool(isatty) |
| self._should_watch = False |
| self._local = local() |
|
|
| if ( |
| ( |
| watchfd |
| and ( |
| (sys.platform.startswith("linux") or sys.platform.startswith("darwin")) |
| |
| and ("PYTEST_CURRENT_TEST" not in os.environ) |
| ) |
| ) |
| |
| or watchfd == "force" |
| ): |
| self._should_watch = True |
| self._setup_stream_redirects(name) |
|
|
| if echo: |
| if hasattr(echo, "read") and hasattr(echo, "write"): |
| |
| |
| if self._should_watch: |
| try: |
| echo_fd = echo.fileno() |
| except Exception: |
| echo_fd = None |
|
|
| if echo_fd is not None and echo_fd == self._original_stdstream_fd: |
| |
| |
| echo = io.TextIOWrapper( |
| io.FileIO( |
| self._original_stdstream_copy, |
| "w", |
| ) |
| ) |
| self.echo = echo |
| else: |
| msg = "echo argument must be a file-like object" |
| raise ValueError(msg) |
|
|
| @property |
| def parent_header(self): |
| try: |
| |
| return self._parent_header.get() |
| except LookupError: |
| |
| return self._parent_header_global |
|
|
| @parent_header.setter |
| def parent_header(self, value): |
| self._parent_header_global = value |
| return self._parent_header.set(value) |
|
|
| def isatty(self): |
| """Return a bool indicating whether this is an 'interactive' stream. |
| |
| Returns: |
| Boolean |
| """ |
| return self._isatty |
|
|
| def _setup_stream_redirects(self, name): |
| pr, pw = os.pipe() |
| fno = self._original_stdstream_fd = getattr(sys, name).fileno() |
| self._original_stdstream_copy = os.dup(fno) |
| os.dup2(pw, fno) |
|
|
| self._fid = pr |
|
|
| self._exc = None |
| self.watch_fd_thread = threading.Thread(target=self._watch_pipe_fd) |
| self.watch_fd_thread.daemon = True |
| self.watch_fd_thread.start() |
|
|
| def _is_master_process(self): |
| return os.getpid() == self._master_pid |
|
|
| def set_parent(self, parent): |
| """Set the parent header.""" |
| self.parent_header = extract_header(parent) |
|
|
| def close(self): |
| """Close the stream.""" |
| if self._should_watch: |
| self._should_watch = False |
| |
| |
| os.write(self._original_stdstream_fd, b"\0") |
| self.watch_fd_thread.join() |
| |
| os.dup2(self._original_stdstream_copy, self._original_stdstream_fd) |
| os.close(self._original_stdstream_copy) |
| if self._exc: |
| etype, value, tb = self._exc |
| traceback.print_exception(etype, value, tb) |
| self.pub_thread = None |
|
|
| @property |
| def closed(self): |
| return self.pub_thread is None |
|
|
| def _schedule_flush(self): |
| """schedule a flush in the IO thread |
| |
| call this on write, to indicate that flush should be called soon. |
| """ |
| if self._flush_pending: |
| return |
| self._flush_pending = True |
|
|
| |
| def _schedule_in_thread(): |
| self._io_loop.call_later(self.flush_interval, self._flush) |
|
|
| self.pub_thread.schedule(_schedule_in_thread) |
|
|
| def flush(self): |
| """trigger actual zmq send |
| |
| send will happen in the background thread |
| """ |
| if ( |
| self.pub_thread |
| and self.pub_thread.thread is not None |
| and self.pub_thread.thread.is_alive() |
| and self.pub_thread.thread.ident != threading.current_thread().ident |
| ): |
| |
| self.pub_thread.schedule(self._flush) |
| |
| evt = threading.Event() |
| self.pub_thread.schedule(evt.set) |
| |
| if not evt.wait(self.flush_timeout): |
| |
| |
| print("IOStream.flush timed out", file=sys.__stderr__) |
| else: |
| self._flush() |
|
|
| def _flush(self): |
| """This is where the actual send happens. |
| |
| _flush should generally be called in the IO thread, |
| unless the thread has been destroyed (e.g. forked subprocess). |
| """ |
| self._flush_pending = False |
| self._subprocess_flush_pending = False |
|
|
| if self.echo is not None: |
| try: |
| self.echo.flush() |
| except OSError as e: |
| if self.echo is not sys.__stderr__: |
| print(f"Flush failed: {e}", file=sys.__stderr__) |
|
|
| for parent, data in self._flush_buffers(): |
| if data: |
| |
| |
| |
| self.session.pid = os.getpid() |
| content = {"name": self.name, "text": data} |
| msg = self.session.msg("stream", content, parent=parent) |
|
|
| |
| |
| |
| for hook in self._hooks: |
| msg = hook(msg) |
| if msg is None: |
| return |
|
|
| self.session.send( |
| self.pub_thread, |
| msg, |
| ident=self.topic, |
| ) |
|
|
| def write(self, string: str) -> int | None: |
| """Write to current stream after encoding if necessary |
| |
| Returns |
| ------- |
| len : int |
| number of items from input parameter written to stream. |
| |
| """ |
| parent = self.parent_header |
|
|
| if not isinstance(string, str): |
| msg = f"write() argument must be str, not {type(string)}" |
| raise TypeError(msg) |
|
|
| if self.echo is not None: |
| try: |
| self.echo.write(string) |
| except OSError as e: |
| if self.echo is not sys.__stderr__: |
| print(f"Write failed: {e}", file=sys.__stderr__) |
|
|
| if self.pub_thread is None: |
| msg = "I/O operation on closed file" |
| raise ValueError(msg) |
|
|
| is_child = not self._is_master_process() |
| |
| with self._buffer_lock: |
| self._buffers[frozenset(parent.items())].write(string) |
| if is_child: |
| |
| |
| if self._subprocess_flush_pending: |
| return None |
| self._subprocess_flush_pending = True |
| |
| self.pub_thread.schedule(self._flush) |
| else: |
| self._schedule_flush() |
|
|
| return len(string) |
|
|
| def writelines(self, sequence): |
| """Write lines to the stream.""" |
| if self.pub_thread is None: |
| msg = "I/O operation on closed file" |
| raise ValueError(msg) |
| for string in sequence: |
| self.write(string) |
|
|
| def writable(self): |
| """Test whether the stream is writable.""" |
| return True |
|
|
| def _flush_buffers(self): |
| """clear the current buffer and return the current buffer data.""" |
| buffers = self._rotate_buffers() |
| for frozen_parent, buffer in buffers.items(): |
| data = buffer.getvalue() |
| buffer.close() |
| yield dict(frozen_parent), data |
|
|
| def _rotate_buffers(self): |
| """Returns the current buffer and replaces it with an empty buffer.""" |
| with self._buffer_lock: |
| old_buffers = self._buffers |
| self._buffers = defaultdict(StringIO) |
| return old_buffers |
|
|
| @property |
| def _hooks(self): |
| if not hasattr(self._local, "hooks"): |
| |
| self._local.hooks = [] |
| return self._local.hooks |
|
|
| def register_hook(self, hook): |
| """ |
| Registers a hook with the thread-local storage. |
| |
| Parameters |
| ---------- |
| hook : Any callable object |
| |
| Returns |
| ------- |
| Either a publishable message, or `None`. |
| The hook callable must return a message from |
| the __call__ method if they still require the |
| `session.send` method to be called after transformation. |
| Returning `None` will halt that execution path, and |
| session.send will not be called. |
| """ |
| self._hooks.append(hook) |
|
|
| def unregister_hook(self, hook): |
| """ |
| Un-registers a hook with the thread-local storage. |
| |
| Parameters |
| ---------- |
| hook : Any callable object which has previously been |
| registered as a hook. |
| |
| Returns |
| ------- |
| bool - `True` if the hook was removed, `False` if it wasn't |
| found. |
| """ |
| try: |
| self._hooks.remove(hook) |
| return True |
| except ValueError: |
| return False |
|
|