Datasets:
Sricharan Reddy Varra
commited on
Commit
·
3d4387e
1
Parent(s):
56f4643
added post-clustering files
Browse files- ark_example.py +2 -9
- data/post_clustering.zip +3 -0
ark_example.py
CHANGED
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@@ -33,7 +33,6 @@ TMA24_R9C1 -> fov10
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"""
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from ensurepip import version
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import datasets
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import pathlib
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@@ -66,6 +65,7 @@ _URL_DATA = {
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"example_pixel_output_dir": "./data/pixie/example_pixel_output_dir.zip",
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"example_cell_output_dir": "./data/pixie/example_cell_output_dir.zip",
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"spatial_lda": "./data/spatial_analysis/spatial_lda.zip",
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}
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_URL_DATASET_CONFIGS = {
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@@ -108,6 +108,7 @@ _URL_DATASET_CONFIGS = {
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"image_data": _URL_DATA["image_data"],
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"cell_table": _URL_DATA["cell_table"],
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"deepcell_output": _URL_DATA["deepcell_output"],
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}
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}
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@@ -118,14 +119,6 @@ class ArkExample(datasets.GeneratorBasedBuilder):
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VERSION = datasets.Version("0.0.4")
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# This is an example of a dataset with multiple configurations.
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# If you don't want/need to define several sub-sets in your dataset,
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# just remove the BUILDER_CONFIG_CLASS and the BUILDER_CONFIGS attributes.
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# If you need to make complex sub-parts in the datasets with configurable options
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# You can create your own builder configuration class to store attribute, inheriting from datasets.BuilderConfig
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# BUILDER_CONFIG_CLASS = MyBuilderConfig
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# You will be able to load one or the other configurations in the following list with
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BUILDER_CONFIGS = [
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datasets.BuilderConfig(
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"""
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import datasets
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import pathlib
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"example_pixel_output_dir": "./data/pixie/example_pixel_output_dir.zip",
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"example_cell_output_dir": "./data/pixie/example_cell_output_dir.zip",
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"spatial_lda": "./data/spatial_analysis/spatial_lda.zip",
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"post_clustering": "./data/post_clustering.zip"
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}
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_URL_DATASET_CONFIGS = {
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"image_data": _URL_DATA["image_data"],
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"cell_table": _URL_DATA["cell_table"],
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"deepcell_output": _URL_DATA["deepcell_output"],
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"post_clustering": _URL_DATA["post_clustering"],
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}
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}
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VERSION = datasets.Version("0.0.4")
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# You will be able to load one or the other configurations in the following list with
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BUILDER_CONFIGS = [
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datasets.BuilderConfig(
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data/post_clustering.zip
ADDED
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@@ -0,0 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:7a606bc9dfeee018dea5e94eaf022e9023db154d41a775471f4ded439216cbbf
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size 9719104
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