Datasets:

angelolab
/

ark_example

Tasks:

Image Segmentation

Sub-tasks:

instance-segmentation

Size:

n<1K

Tags:

MIBI

Multiplexed-Imaging

License:

Dataset card Files Files and versions

xet

Community

ark_example / data

Commit History

updated cell_output_dir names

04aa699

Sricharan Reddy Varra commited on Jan 6, 2023

removed .DS_Store and __MACOSX, add missing pixel_som file

05a5b51

Sricharan Reddy Varra commited on Jan 6, 2023

removed .DS_Store and __MACOSX

8c33fad

Sricharan Reddy Varra commited on Jan 6, 2023

updated cell output (again x2)

4ed8d55

Sricharan Reddy Varra commited on Jan 6, 2023

updated cell output (again)

6d8d0f1

Sricharan Reddy Varra commited on Jan 6, 2023

updated pixel output

16b326e

Sricharan Reddy Varra commited on Jan 5, 2023

updated cell output

61218d6

Sricharan Reddy Varra commited on Jan 5, 2023

removed .DS_Store and __MACOSX

8053247

Sricharan Reddy Varra commited on Jan 4, 2023

fixed fov4, removed modified channels

b0180f9

Sricharan Reddy Varra commited on Jan 4, 2023

updated image data

9e29215

Sricharan Reddy Varra commited on Jan 4, 2023

updated cell json file

fb3be10

Sricharan Reddy Varra commited on Dec 21, 2022

merge main

5fdb2b5

Sricharan Reddy Varra commited on Dec 21, 2022

Remove example prefix from example cell clustering files (#9)

b6a1c98

alex-l-kong commited on Dec 19, 2022

Change 'segmentation_dir' to 'segmentation/deepcell_output' in cell_clustering_params.json (#7)

12636e1

alex-l-kong commited on Dec 14, 2022

removed .DS_Store and __MACOSX

9066db2

Sricharan Reddy Varra commited on Dec 13, 2022

dataset with cropped fov0, compressed channel tiffs also

3ce2e0e

Sricharan Reddy Varra commited on Dec 13, 2022

Segmentation Dataset - Fix Marker Thresholds File (#6)

2d414a1

srivarra commited on Nov 18, 2022

Spatial Analysis Datasets (#5)

f54bf1d

srivarra commited on Nov 16, 2022

seg_suffix_change (#4)

9b38f7e

alex-l-kong commited on Nov 11, 2022

use_tiff_suffix (#3)

c3c84bf

alex-l-kong commited on Nov 2, 2022

example_dataset_updates (#1)

3bf04b3

srivarra commited on Oct 26, 2022

dataset name change

6ddab34

Sricharan Reddy Varra commited on Sep 22, 2022

fov unzip folder name fix

453973a

Sricharan Reddy Varra commited on Sep 1, 2022

fov unzip name fix

9a5161e

Sricharan Reddy Varra commited on Aug 31, 2022

zip name change

1ccf0e7

Sricharan Reddy Varra commited on Aug 31, 2022

dataset rename, tma->fov mapping

67d838f

Sricharan Reddy Varra commited on Aug 31, 2022

py file change

515c2c5

Sricharan Reddy Varra commited on Aug 30, 2022

py file change

fb8b707

Sricharan Reddy Varra commited on Aug 30, 2022

fovs.zip fix

4193aa0

Sricharan Reddy Varra commited on Aug 29, 2022

added fov zip file

53517ab

Sricharan Reddy Varra commited on Aug 29, 2022

Commit History

updated cell_output_dir names 04aa699

removed .DS_Store and __MACOSX, add missing pixel_som file 05a5b51

removed .DS_Store and __MACOSX 8c33fad

updated cell output (again x2) 4ed8d55

updated cell output (again) 6d8d0f1

updated pixel output 16b326e

updated cell output 61218d6

removed .DS_Store and __MACOSX 8053247

fixed fov4, removed modified channels b0180f9

updated image data 9e29215

updated cell json file fb3be10

merge main 5fdb2b5

Remove example prefix from example cell clustering files (#9) b6a1c98

Change 'segmentation_dir' to 'segmentation/deepcell_output' in cell_clustering_params.json (#7) 12636e1

removed .DS_Store and __MACOSX 9066db2

dataset with cropped fov0, compressed channel tiffs also 3ce2e0e

Segmentation Dataset - Fix Marker Thresholds File (#6) 2d414a1

Spatial Analysis Datasets (#5) f54bf1d

seg_suffix_change (#4) 9b38f7e

use_tiff_suffix (#3) c3c84bf

example_dataset_updates (#1) 3bf04b3

dataset name change 6ddab34

fov unzip folder name fix 453973a

fov unzip name fix 9a5161e

zip name change 1ccf0e7

dataset rename, tma->fov mapping 67d838f

py file change 515c2c5

py file change fb8b707

fovs.zip fix 4193aa0

added fov zip file 53517ab

updated cell_output_dir names

04aa699

removed .DS_Store and __MACOSX, add missing pixel_som file

05a5b51

removed .DS_Store and __MACOSX

8c33fad

updated cell output (again x2)

4ed8d55

updated cell output (again)

6d8d0f1

updated pixel output

16b326e

updated cell output

61218d6

removed .DS_Store and __MACOSX

8053247

fixed fov4, removed modified channels

b0180f9

updated image data

9e29215

updated cell json file

fb3be10

merge main

5fdb2b5

Remove example prefix from example cell clustering files (#9)

b6a1c98

Change 'segmentation_dir' to 'segmentation/deepcell_output' in cell_clustering_params.json (#7)

12636e1

removed .DS_Store and __MACOSX

9066db2

dataset with cropped fov0, compressed channel tiffs also

3ce2e0e

Segmentation Dataset - Fix Marker Thresholds File (#6)

2d414a1

Spatial Analysis Datasets (#5)

f54bf1d

seg_suffix_change (#4)

9b38f7e

use_tiff_suffix (#3)

c3c84bf

example_dataset_updates (#1)

3bf04b3

dataset name change

6ddab34

fov unzip folder name fix

453973a

fov unzip name fix

9a5161e

zip name change

1ccf0e7

dataset rename, tma->fov mapping

67d838f

py file change

515c2c5

py file change

fb8b707

fovs.zip fix

4193aa0

added fov zip file

53517ab