anon2435 commited on
Commit
c5ba2c4
·
verified ·
1 Parent(s): 395ede5

Upload CoPeP reviewer sample

Browse files
.gitattributes CHANGED
@@ -1,60 +1 @@
1
- *.7z filter=lfs diff=lfs merge=lfs -text
2
- *.arrow filter=lfs diff=lfs merge=lfs -text
3
- *.avro filter=lfs diff=lfs merge=lfs -text
4
- *.bin filter=lfs diff=lfs merge=lfs -text
5
- *.bz2 filter=lfs diff=lfs merge=lfs -text
6
- *.ckpt filter=lfs diff=lfs merge=lfs -text
7
- *.ftz filter=lfs diff=lfs merge=lfs -text
8
- *.gz filter=lfs diff=lfs merge=lfs -text
9
- *.h5 filter=lfs diff=lfs merge=lfs -text
10
- *.joblib filter=lfs diff=lfs merge=lfs -text
11
- *.lfs.* filter=lfs diff=lfs merge=lfs -text
12
- *.lz4 filter=lfs diff=lfs merge=lfs -text
13
- *.mds filter=lfs diff=lfs merge=lfs -text
14
- *.mlmodel filter=lfs diff=lfs merge=lfs -text
15
- *.model filter=lfs diff=lfs merge=lfs -text
16
- *.msgpack filter=lfs diff=lfs merge=lfs -text
17
- *.npy filter=lfs diff=lfs merge=lfs -text
18
- *.npz filter=lfs diff=lfs merge=lfs -text
19
- *.onnx filter=lfs diff=lfs merge=lfs -text
20
- *.ot filter=lfs diff=lfs merge=lfs -text
21
  *.parquet filter=lfs diff=lfs merge=lfs -text
22
- *.pb filter=lfs diff=lfs merge=lfs -text
23
- *.pickle filter=lfs diff=lfs merge=lfs -text
24
- *.pkl filter=lfs diff=lfs merge=lfs -text
25
- *.pt filter=lfs diff=lfs merge=lfs -text
26
- *.pth filter=lfs diff=lfs merge=lfs -text
27
- *.rar filter=lfs diff=lfs merge=lfs -text
28
- *.safetensors filter=lfs diff=lfs merge=lfs -text
29
- saved_model/**/* filter=lfs diff=lfs merge=lfs -text
30
- *.tar.* filter=lfs diff=lfs merge=lfs -text
31
- *.tar filter=lfs diff=lfs merge=lfs -text
32
- *.tflite filter=lfs diff=lfs merge=lfs -text
33
- *.tgz filter=lfs diff=lfs merge=lfs -text
34
- *.wasm filter=lfs diff=lfs merge=lfs -text
35
- *.xz filter=lfs diff=lfs merge=lfs -text
36
- *.zip filter=lfs diff=lfs merge=lfs -text
37
- *.zst filter=lfs diff=lfs merge=lfs -text
38
- *tfevents* filter=lfs diff=lfs merge=lfs -text
39
- # Audio files - uncompressed
40
- *.pcm filter=lfs diff=lfs merge=lfs -text
41
- *.sam filter=lfs diff=lfs merge=lfs -text
42
- *.raw filter=lfs diff=lfs merge=lfs -text
43
- # Audio files - compressed
44
- *.aac filter=lfs diff=lfs merge=lfs -text
45
- *.flac filter=lfs diff=lfs merge=lfs -text
46
- *.mp3 filter=lfs diff=lfs merge=lfs -text
47
- *.ogg filter=lfs diff=lfs merge=lfs -text
48
- *.wav filter=lfs diff=lfs merge=lfs -text
49
- # Image files - uncompressed
50
- *.bmp filter=lfs diff=lfs merge=lfs -text
51
- *.gif filter=lfs diff=lfs merge=lfs -text
52
- *.png filter=lfs diff=lfs merge=lfs -text
53
- *.tiff filter=lfs diff=lfs merge=lfs -text
54
- # Image files - compressed
55
- *.jpg filter=lfs diff=lfs merge=lfs -text
56
- *.jpeg filter=lfs diff=lfs merge=lfs -text
57
- *.webp filter=lfs diff=lfs merge=lfs -text
58
- # Video files - compressed
59
- *.mp4 filter=lfs diff=lfs merge=lfs -text
60
- *.webm filter=lfs diff=lfs merge=lfs -text
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
  *.parquet filter=lfs diff=lfs merge=lfs -text
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
README.md ADDED
@@ -0,0 +1,43 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ---
2
+ license: cc-by-4.0
3
+ pretty_name: CoPeP Reviewer Sample
4
+ task_categories:
5
+ - other
6
+ tags:
7
+ - protein
8
+ - biology
9
+ - continual-learning
10
+ - parquet
11
+ configs:
12
+ - config_name: default
13
+ data_files:
14
+ - split: train
15
+ path: train/train_sample.parquet
16
+ - split: validation
17
+ path: val/val.parquet
18
+ ---
19
+
20
+ # CoPeP Reviewer Sample
21
+
22
+ This repository contains a compact deterministic sample of `anon2435/CoPeP` for
23
+ reviewer inspection. It is intended for checking file format, schema, and example
24
+ records without downloading the full dataset.
25
+
26
+ ## Contents
27
+
28
+ - `train/train_sample.parquet`: deterministic stratified train-row sample.
29
+ - `val/val.parquet`: full validation parquet from the anonymous CoPeP release.
30
+ - `dataset_manifest.json`: sampling details, row counts, and limitations.
31
+
32
+ The train sample preserves the main dataset train-row schema:
33
+ `name`, `sequence`, `seq_hash`, `task_0` through `task_9`, and `row_idx`.
34
+
35
+ ## Sampling
36
+
37
+ Rows are grouped by first observed temporal task, defined as the first true
38
+ `task_0` through `task_9` column. Up to 10,000 rows are selected per group using
39
+ a deterministic score derived from `seq_hash`, `row_idx`, and a fixed seed.
40
+
41
+ This sample is not a drop-in replacement for the full dataset. It does not
42
+ include task split files, because those files reference row indices in the full
43
+ training table.
dataset_manifest.json ADDED
@@ -0,0 +1,26 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "repo_id": "anon2435/CoPeP-sample",
3
+ "source_repo_id": "anon2435/CoPeP",
4
+ "sample_type": "deterministic_stratified_review_sample",
5
+ "sampling_seed_hex": "0xc0de2026",
6
+ "sampling_method": "Rows are grouped by first observed temporal task, defined as the first true task_0...task_9 column. For each group, rows with the smallest deterministic splitmix64((seq_hash XOR row_idx) plus seed) scores are selected.",
7
+ "target_rows_per_first_observed_task": 10000,
8
+ "train_rows": 100000,
9
+ "first_observed_task_counts": {
10
+ "task_0": 10000,
11
+ "task_1": 10000,
12
+ "task_2": 10000,
13
+ "task_3": 10000,
14
+ "task_4": 10000,
15
+ "task_5": 10000,
16
+ "task_6": 10000,
17
+ "task_7": 10000,
18
+ "task_8": 10000,
19
+ "task_9": 10000
20
+ },
21
+ "files": {
22
+ "train": "train/train_sample.parquet",
23
+ "validation": "val/val.parquet"
24
+ },
25
+ "limitations": "This sample is for reviewer inspection of schema and example records. It is not a drop-in replacement for full CoPeP training, temporal split evaluation, or benchmark reproduction."
26
+ }
train/train_sample.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:5f1ef78de77ad24509b9ee86a27179bf2f8e135d7a253542177d089c48a7a7fa
3
+ size 23328181
val/val.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:685b388577f1b1a0e5989ec020701c7a93f05454f5995774b87f32940db31089
3
+ size 5549540