# Generated by scripts/apply_shared_task_images.py for task_052_protein_md_structure_prep.
# The task-native Dockerfile is preserved at environment/env/Dockerfile.
# task-native-dockerfile-sha256: 32430eac937544a83a7c530aa0817142e1f1d6d5674c208e0792f67b4c5ac59f
FROM --platform=linux/amd64 frontierchallenge/cpu-open:2026.08

USER root
WORKDIR /app
RUN rm -rf /app/input /app/data /app/output /sop \
    && mkdir -p /app/input /app/data /app/output /sop \
    && ln -sf /opt/conda/envs/general/bin/python /usr/local/bin/python \
    && ln -sf /opt/conda/envs/general/bin/python /usr/local/bin/python3 \
    && ln -sf /opt/conda/envs/general/bin/pip /usr/local/bin/pip \
    && ln -sf /opt/conda/envs/general/bin/pip /usr/local/bin/pip3
COPY data/ /app/input/
RUN ln -s /app/input /sop/input \
    && ln -s /app/output /sop/output \
    && chown -R "$MAMBA_USER:$MAMBA_USER" /app /sop
USER $MAMBA_USER
CMD ["bash"]