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@@ -275,4 +275,121 @@ configs:
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  data_files:
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  - split: test
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  path: 2019_source/test-*
 
 
 
 
 
 
 
 
 
 
 
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  ---
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  data_files:
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  - split: test
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  path: 2019_source/test-*
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+ license: cc-by-sa-4.0
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+ task_categories:
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+ - text-retrieval
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+ - text-classification
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+ language:
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+ - en
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+ tags:
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+ - medical
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+ pretty_name: TREC_Precision-Medicine
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+ size_categories:
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+ - 100K<n<1M
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  ---
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+
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+ # TREC Precision Medicine (2017, 2018 and 2019)
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+
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+ | | Links |
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+ |:-------------------------------:|:-------------:|
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+ | **Homepage:** | [TREC](https://www.trec-cds.org/) |
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+ | **Paper:** | [2017](https://trec.nist.gov/pubs/trec26/papers/Overview-PM.pdf) / [2018](https://trec.nist.gov/pubs/trec27/papers/Overview-PM.pdf) / [2019](https://trec.nist.gov/pubs/trec28/papers/OVERVIEW.PM.pdf) / [2020](https://trec.nist.gov/pubs/trec29/papers/OVERVIEW.PM.pdf) |
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+ | **Contact (Original Authors):** | Kirk Roberts (Kirk.Roberts@uth.tmc.edu ) |
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+ | **Contact (Curator):** | [Artur Guimarães](https://araag2.netlify.app/) (artur.guimas@gmail.com) |
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+
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+
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+ ### Dataset Summary
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+
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+ `This track focused on oncologists looking for evidence-based treatment literature and clinical trials.`
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+
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+ ### Data Instances
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+
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+ #### Source Format
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+
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+ ```json
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+ {
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+ "query_id":"1",
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+ "disease":"melanoma",
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+ "gene":"BRAF (E586K)",
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+ "demographic":"64-year-old female",
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+ "doc_id":"NCT00001685",
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+ "relevance":0,
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+ "iteration":"0"
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+ }
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+ ```
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+
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+ ### Data Fields
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+
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+ #### Source Format
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+
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+ TO:DO
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+
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+ ### Data Splits
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+
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+ TO:DO
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+
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+ ## Additional Information
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+
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+ ### Dataset Curators
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+
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+ #### Original Paper
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+
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+ - Kirk Roberts - School of Biomedical Informatics, The University of Texas Health Science Center, Houston, TX
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+ Lister Hill National Center for Biomedical Communications, U.S. National Library of Medicine, Bethesda, MD
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+ - Dina Demner-Fushman - Lister Hill National Center for Biomedical Communications, U.S. National Library of Medicine, Bethesda, MD
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+ - Ellen M. Voorhees - Information Technology Laboratory, National Institute of Standards and Technology, Gaithersburg, MD
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+ - William R. Hersh and Steven Bedrick - Department of Medical Informatics & Clinical Epidemiology, Oregon Health and Science University, Portland, OR
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+ - Alexander J. Lazar - Departments of Pathology & Genomic Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX
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+ - Shubham Pant - Department of Investigational Cancer Therapeutics, The University of Texas MD Anderson Cancer Center, Houston, TX
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+
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+ #### Huggingface Curator
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+
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+ - [Artur Guimarães](https://araag2.netlify.app/) (artur.guimas@gmail.com) - INESC-ID / University of Lisbon - Instituto Superior Técnico
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+
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+ ### Licensing Information
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+
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+ [CC BY-SA 4.0](https://creativecommons.org/licenses/by-sa/4.0/deed.en)
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+
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+ ### Citation Information
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+
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+ ```bibtex
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+ @inproceedings{roberts2017overview,
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+ title={Overview of the TREC 2017 precision medicine track},
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+ author={Roberts, Kirk and Demner-Fushman, Dina and Voorhees, Ellen M and Hersh, William R and Bedrick, Steven and Lazar, Alexander J and Pant, Shubham},
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+ booktitle={The... text REtrieval conference: TREC. Text REtrieval Conference},
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+ volume={26},
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+ pages={https--trec},
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+ year={2017}
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+ }
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+
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+ @inproceedings{roberts2018overview,
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+ title={Overview of the TREC 2018 Precision Medicine Track},
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+ author={Roberts, Kirk and Demner-Fushman, Dina and Voorhees, Ellen M and Hersh, William R and Bedrick, Steven and Lazar, Alexander J},
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+ booktitle={27th Text REtrieval Conference, TREC 2018},
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+ year={2018}
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+ }
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+
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+ @inproceedings{roberts2019overview,
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+ title={Overview of the TREC 2019 precision medicine track},
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+ author={Roberts, Kirk and Demner-Fushman, Dina and Voorhees, Ellen M and Hersh, William R and Bedrick, Steven and Lazar, Alexander J and Pant, Shubham and Meric-Bernstam, Funda},
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+ booktitle={The... Text REtrieval Conference: TREC. Text REtrieval Conference},
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+ volume={1250},
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+ pages={https--trec},
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+ year={2019}
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+ }
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+
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+ @inproceedings{roberts2020overview,
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+ title={Overview of the TREC 2020 precision medicine track},
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+ author={Roberts, Kirk and Demner-Fushman, Dina and Voorhees, Ellen M and Bedrick, Steven and Hersh, William R},
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+ booktitle={The... text REtrieval conference: TREC. Text REtrieval Conference},
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+ volume={1266},
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+ pages={https--trec},
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+ year={2020}
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+ }
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+
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+ ```
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+
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+
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+ ### Contributions
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+
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+ Thanks to [araag2](https://github.com/araag2) for adding this dataset.