bealam111 commited on
Commit
1fa95f4
·
verified ·
1 Parent(s): 8971565

Renumber colon sequences from 1

Browse files
README.md CHANGED
@@ -7,6 +7,8 @@ Each sequence is stored as one `.tar` WebDataset shard.
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  ```text
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  dataset/
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  colon/
 
 
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  sequence_2/
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  dataset-colon-sequence_2.tar
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  sequence_3/
@@ -15,8 +17,6 @@ dataset/
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  dataset-colon-sequence_4.tar
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  sequence_5/
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  dataset-colon-sequence_5.tar
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- sequence_6/
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- dataset-colon-sequence_6.tar
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  sample_dataset/
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  colon/
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  sequence_1/
@@ -62,7 +62,7 @@ import webdataset as wds
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  url = (
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  "https://huggingface.co/datasets/bealam111/EndoX_Dataset/resolve/"
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- "self-contained-upload/dataset/colon/sequence_2/dataset-colon-sequence_2.tar"
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  )
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  dataset = (
@@ -87,8 +87,7 @@ Download one sequence with the Hugging Face CLI:
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  ```bash
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  hf download bealam111/EndoX_Dataset \
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  --type dataset \
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- --revision self-contained-upload \
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- --include "dataset/colon/sequence_2/dataset-colon-sequence_2.tar" \
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  --local-dir ./EndoX_Dataset
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  ```
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@@ -100,8 +99,8 @@ The `.tar` files use WebDataset names such as `0000.rgb.png` so each frame can b
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  from pathlib import Path
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  import shutil
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- sequence_dir = Path("./EndoX_Dataset/dataset/colon/sequence_2")
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- tar_path = sequence_dir / "dataset-colon-sequence_2.tar"
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  extract_dir = sequence_dir / "extracted"
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  shutil.unpack_archive(tar_path, extract_dir)
 
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  ```text
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  dataset/
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  colon/
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+ sequence_1/
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+ dataset-colon-sequence_1.tar
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  sequence_2/
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  dataset-colon-sequence_2.tar
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  sequence_3/
 
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  dataset-colon-sequence_4.tar
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  sequence_5/
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  dataset-colon-sequence_5.tar
 
 
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  sample_dataset/
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  colon/
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  sequence_1/
 
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  url = (
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  "https://huggingface.co/datasets/bealam111/EndoX_Dataset/resolve/"
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+ "main/dataset/colon/sequence_1/dataset-colon-sequence_1.tar"
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  )
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  dataset = (
 
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  ```bash
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  hf download bealam111/EndoX_Dataset \
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  --type dataset \
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+ --include "dataset/colon/sequence_1/dataset-colon-sequence_1.tar" \
 
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  --local-dir ./EndoX_Dataset
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  ```
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  from pathlib import Path
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  import shutil
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+ sequence_dir = Path("./EndoX_Dataset/dataset/colon/sequence_1")
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+ tar_path = sequence_dir / "dataset-colon-sequence_1.tar"
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  extract_dir = sequence_dir / "extracted"
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  shutil.unpack_archive(tar_path, extract_dir)
dataset/colon/{sequence_6/dataset-colon-sequence_6.tar → sequence_1/dataset-colon-sequence_1.tar} RENAMED
@@ -1,3 +1,3 @@
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dataset/colon/sequence_2/dataset-colon-sequence_2.tar CHANGED
@@ -1,3 +1,3 @@
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dataset/colon/sequence_3/dataset-colon-sequence_3.tar CHANGED
@@ -1,3 +1,3 @@
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dataset/colon/sequence_4/dataset-colon-sequence_4.tar CHANGED
@@ -1,3 +1,3 @@
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dataset/colon/sequence_5/dataset-colon-sequence_5.tar CHANGED
@@ -1,3 +1,3 @@
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