Renumber colon sequences from 1
Browse files- README.md +6 -7
- dataset/colon/{sequence_6/dataset-colon-sequence_6.tar → sequence_1/dataset-colon-sequence_1.tar} +2 -2
- dataset/colon/sequence_2/dataset-colon-sequence_2.tar +2 -2
- dataset/colon/sequence_3/dataset-colon-sequence_3.tar +2 -2
- dataset/colon/sequence_4/dataset-colon-sequence_4.tar +2 -2
- dataset/colon/sequence_5/dataset-colon-sequence_5.tar +2 -2
README.md
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@@ -7,6 +7,8 @@ Each sequence is stored as one `.tar` WebDataset shard.
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```text
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dataset/
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colon/
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sequence_2/
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dataset-colon-sequence_2.tar
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sequence_3/
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@@ -15,8 +17,6 @@ dataset/
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dataset-colon-sequence_4.tar
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sequence_5/
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dataset-colon-sequence_5.tar
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sequence_6/
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dataset-colon-sequence_6.tar
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sample_dataset/
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colon/
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sequence_1/
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@@ -62,7 +62,7 @@ import webdataset as wds
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url = (
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"https://huggingface.co/datasets/bealam111/EndoX_Dataset/resolve/"
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-
"
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)
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dataset = (
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@@ -87,8 +87,7 @@ Download one sequence with the Hugging Face CLI:
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```bash
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hf download bealam111/EndoX_Dataset \
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--type dataset \
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--
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--include "dataset/colon/sequence_2/dataset-colon-sequence_2.tar" \
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--local-dir ./EndoX_Dataset
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```
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@@ -100,8 +99,8 @@ The `.tar` files use WebDataset names such as `0000.rgb.png` so each frame can b
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from pathlib import Path
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import shutil
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sequence_dir = Path("./EndoX_Dataset/dataset/colon/
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tar_path = sequence_dir / "dataset-colon-
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extract_dir = sequence_dir / "extracted"
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shutil.unpack_archive(tar_path, extract_dir)
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```text
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dataset/
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colon/
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sequence_1/
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dataset-colon-sequence_1.tar
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sequence_2/
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dataset-colon-sequence_2.tar
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sequence_3/
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dataset-colon-sequence_4.tar
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sequence_5/
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dataset-colon-sequence_5.tar
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sample_dataset/
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colon/
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sequence_1/
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url = (
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"https://huggingface.co/datasets/bealam111/EndoX_Dataset/resolve/"
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"main/dataset/colon/sequence_1/dataset-colon-sequence_1.tar"
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)
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dataset = (
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```bash
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hf download bealam111/EndoX_Dataset \
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--type dataset \
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--include "dataset/colon/sequence_1/dataset-colon-sequence_1.tar" \
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--local-dir ./EndoX_Dataset
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```
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from pathlib import Path
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import shutil
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sequence_dir = Path("./EndoX_Dataset/dataset/colon/sequence_1")
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tar_path = sequence_dir / "dataset-colon-sequence_1.tar"
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extract_dir = sequence_dir / "extracted"
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shutil.unpack_archive(tar_path, extract_dir)
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dataset/colon/{sequence_6/dataset-colon-sequence_6.tar → sequence_1/dataset-colon-sequence_1.tar}
RENAMED
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version https://git-lfs.github.com/spec/v1
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oid sha256:
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size
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version https://git-lfs.github.com/spec/v1
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oid sha256:17c1b0e081692e736ad338a1e254abe9d6fee07cef003e4913f73f41d9859d22
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size 11607531520
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dataset/colon/sequence_2/dataset-colon-sequence_2.tar
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@@ -1,3 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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size
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version https://git-lfs.github.com/spec/v1
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oid sha256:1fc91c21a41cdf0c5ddc89ecdfd4084fc5420a8103c45859660b90c06a32c1fd
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size 10666106880
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dataset/colon/sequence_3/dataset-colon-sequence_3.tar
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@@ -1,3 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:
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size
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version https://git-lfs.github.com/spec/v1
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oid sha256:33b237797adde70d4847ce6eaa1bf7d365ecc72057ee5078371ac795292027be
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size 10467379200
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dataset/colon/sequence_4/dataset-colon-sequence_4.tar
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version https://git-lfs.github.com/spec/v1
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oid sha256:
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size
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version https://git-lfs.github.com/spec/v1
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oid sha256:7a5264f5075f62dc4f23ed9b7c1e9a667449a55ef370e9f77ef78e76a0f49ea1
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size 7529185280
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dataset/colon/sequence_5/dataset-colon-sequence_5.tar
CHANGED
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@@ -1,3 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:
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size
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version https://git-lfs.github.com/spec/v1
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oid sha256:dc321a9b6d8040f73984b945989c615b3759fa6a6568da4ebad4ae33c1ddc179
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size 11329187840
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