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/** @file kdtree.h
** @brief KD-tree
** @author Andrea Vedaldi
**/
/* AUTORIGHTS
Copyright (C) 2007-09 Andrea Vedaldi and Brian Fulkerson
This file is part of VLFeat, available in the terms of the GNU
General Public License version 2.
*/
#ifndef VL_KDTREE_H
#define VL_KDTREE_H
#include "generic.h"
#define VL_KDTREE_SPLIT_HEALP_SIZE 5
typedef struct _VlKDTreeNode VlKDTreeNode ;
typedef struct _VlKDTreeSplitDimension VlKDTreeSplitDimension ;
typedef struct _VlKDTreeDataIndexEntry VlKDTreeDataIndexEntry ;
typedef struct _VlKDForestSearchState VlKDForestSearchState ;
struct _VlKDTreeNode
{
int unsigned parent ;
int lowerChild ;
int upperChild ;
int unsigned splitDimension ;
float splitThreshold ;
float lowerBound ;
float upperBound ;
} ;
struct _VlKDTreeSplitDimension
{
int unsigned dimension ;
float mean ;
float variance ;
} ;
struct _VlKDTreeDataIndexEntry
{
int index ;
float value ;
} ;
/** @brief Thresholding method */
typedef enum _VlKDTreeThresholdingMethod
{
VL_KDTREE_MEDIAN,
VL_KDTREE_MEAN
} VlKDTreeThresholdingMethod ;
/** @brief Neighbor of a query point */
typedef struct _VlKDForestNeighbor {
float distance ; /**< distance to the query point */
unsigned int index ; /**< index of the neighbor in the KDTree data */
} VlKDForestNeighbor ;
typedef struct _VlKDTree
{
VlKDTreeNode * nodes ;
int unsigned numUsedNodes ;
int unsigned numAllocatedNodes ;
VlKDTreeDataIndexEntry * dataIndex ;
int depth ;
} VlKDTree ;
struct _VlKDForestSearchState
{
VlKDTree * tree ;
unsigned int nodeIndex ;
float distanceLowerBound ;
} ;
/** @brief KDForest object */
typedef struct _VlKDForest
{
int numDimensions ;
/* indexed data */
float const * data ;
int numData ;
/* tree structure */
VlKDTree ** trees ;
unsigned int numTrees ;
/* build */
VlKDTreeThresholdingMethod thresholdingMethod ;
VlKDTreeSplitDimension splitHeapArray [VL_KDTREE_SPLIT_HEALP_SIZE] ;
int unsigned splitHeapNumNodes ;
int unsigned splitHeapSize ;
/* querying */
VlKDForestSearchState * searchHeapArray ;
int unsigned searchHeapNumNodes ;
int unsigned searchId ;
int unsigned * searchIdBook ;
int unsigned searchMaxNumComparisons ;
int unsigned searchNumComparisons;
int unsigned searchNumRecursions ;
int unsigned searchNumSimplifications ;
} VlKDForest ;
/** @name Creatind and disposing
** @{ */
VL_EXPORT VlKDForest * vl_kdforest_new (int unsigned numDimensions, int unsigned numTrees) ;
VL_EXPORT void vl_kdforest_delete (VlKDForest * self) ;
/** @} */
/** @name Building and querying
** @{ */
VL_EXPORT void vl_kdforest_build (VlKDForest * self, int numData, float const * data) ;
VL_EXPORT int vl_kdforest_query (VlKDForest * self,
VlKDForestNeighbor * neighbors,
int unsigned numNeighbors,
float const * query) ;
/** @} */
/** @name Retrieving and setting parameters
** @{ */
VL_INLINE int unsigned vl_kdforest_get_depth_of_tree (VlKDForest const * self, int unsigned treeIndex) ;
VL_INLINE int unsigned vl_kdforest_get_num_nodes_of_tree (VlKDForest const * self, int unsigned treeIndex) ;
VL_INLINE int unsigned vl_kdforest_get_num_trees (VlKDForest const * self) ;
VL_INLINE void vl_kdforest_set_max_num_comparisons (VlKDForest * self, int unsigned n) ;
VL_INLINE int unsigned vl_kdforest_get_max_num_comparisons (VlKDForest * self) ;
VL_INLINE void vl_kdforest_set_thresholding_method (VlKDForest * self, VlKDTreeThresholdingMethod method) ;
VL_INLINE VlKDTreeThresholdingMethod vl_kdforest_get_thresholding_method (VlKDForest const * self) ;
/** @} */
/** ------------------------------------------------------------------
** @brief Get the number of nodes of a given tree
** @param self KDForest object.
** @param treeIndex index of the tree.
** @return number of trees.
**/
int unsigned
vl_kdforest_get_num_nodes_of_tree (VlKDForest const * self, int unsigned treeIndex)
{
assert (treeIndex < self->numTrees) ;
return self->trees[treeIndex]->numUsedNodes ;
}
/** ------------------------------------------------------------------
** @brief Get the detph of a given tree
** @param self KDForest object.
** @param treeIndex index of the tree.
** @return number of trees.
**/
int unsigned
vl_kdforest_get_depth_of_tree (VlKDForest const * self, int unsigned treeIndex)
{
assert (treeIndex < self->numTrees) ;
return self->trees[treeIndex]->depth ;
}
/** ------------------------------------------------------------------
** @brief Get the number of trees in the forest
**
** @param self KDForest object.
** @return number of trees.
**/
int unsigned
vl_kdforest_get_num_trees (VlKDForest const * self)
{
return self->numTrees ;
}
/** ------------------------------------------------------------------
** @brief Set the maximum number of comparisons for a search
**
** @param self KDForest object.
** @param n maximum number of leaves.
**
** This function sets the maximum number of comparisons for a
** nearest neighbor search. Setting it to 0 means unbounded comparisons.
**
** @sa ::vl_kdforest_query, ::vl_kdforest_get_max_num_comparisons.
**/
void
vl_kdforest_set_max_num_comparisons (VlKDForest * self, int unsigned n)
{
self->searchMaxNumComparisons = n ;
}
/** ------------------------------------------------------------------
** @brief Get the maximum number of comparisons for a search
**
** @param self KDForest object.
** @return maximum number of leaves.
**
** @sa ::vl_kdforest_set_max_num_comparisons.
**/
int unsigned
vl_kdforest_get_max_num_comparisons (VlKDForest * self)
{
return self->searchMaxNumComparisons ;
}
/** ------------------------------------------------------------------
** @brief Set the thresholding method
** @param self KDForest object.
** @param method one of ::VlKDTreeThresholdingMethod.
**
** @sa ::vl_kdforest_get_thresholding_method
**/
VL_INLINE void
vl_kdforest_set_thresholding_method (VlKDForest * self, VlKDTreeThresholdingMethod method)
{
assert(VL_KDTREE_MEDIAN <= method && method <= VL_KDTREE_MEAN) ;
self->thresholdingMethod = method ;
}
/** ------------------------------------------------------------------
** @brief Get the thresholding method
**
** @param self KDForest object.
** @return thresholding method.
**
** @sa ::vl_kdforest_set_thresholding_method
**/
VL_INLINE VlKDTreeThresholdingMethod
vl_kdforest_get_thresholding_method (VlKDForest const * self)
{
return self->thresholdingMethod ;
}
/* VL_KDTREE_H */
#endif