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upload hub_repos/hprd50/README.md to hub from bigbio repo

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+
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+ ---
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+ language:
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+ - en
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+ license: unknown
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+ license_bigbio_shortname: UNKNOWN
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+ pretty_name: HPRD50
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+ ---
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+
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+
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+ # Dataset Card for HPRD50
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+
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+ ## Dataset Description
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+
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+ - **Homepage:**
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+ - **Pubmed:** True
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+ - **Public:** True
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+ - **Tasks:** Relation Extraction, Named Entity Recognition
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+
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+
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+ HPRD50 is a dataset of randomly selected, hand-annotated abstracts of biomedical papers
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+ referenced by the Human Protein Reference Database (HPRD). It is parsed in XML format,
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+ splitting each abstract into sentences, and in each sentence there may be entities and
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+ interactions between those entities. In this particular dataset, entities are all
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+ proteins and interactions are thus protein-protein interactions.
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+
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+ Moreover, all entities are normalized to the HPRD database. These normalized terms are
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+ stored in each entity's 'type' attribute in the source XML. This means the dataset can
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+ determine e.g. that "Janus kinase 2" and "Jak2" are referencing the same normalized
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+ entity.
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+
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+ Because the dataset contains entities and relations, it is suitable for Named Entity
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+ Recognition and Relation Extraction.
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+
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+
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+
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+ ## Citation Information
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+
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+ ```
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+ @article{fundel2007relex,
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+ title={RelEx—Relation extraction using dependency parse trees},
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+ author={Fundel, Katrin and K{"u}ffner, Robert and Zimmer, Ralf},
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+ journal={Bioinformatics},
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+ volume={23},
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+ number={3},
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+ pages={365--371},
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+ year={2007},
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+ publisher={Oxford University Press}
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+ }
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+
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+ ```