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1 Parent(s): e28c39d

replace inaccurate name.

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Files changed (2) hide show
  1. README.md +3 -3
  2. demos.ipynb +1 -8
README.md CHANGED
@@ -310,7 +310,7 @@ sourced from the POPSICLE Yeast Segmentation Dataset deposition
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  | `nucleus` | `nucleus` |
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  | `nuclear-envelope` | `nuclear envelope` |
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  | `vesicle` | `vesicle` |
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- | `endomembrane` | `membrane-enclosed lumen` |
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  | `mitochondrion` | `mitochondrion` |
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  #### Splits
@@ -322,13 +322,13 @@ sourced from the POPSICLE Yeast Segmentation Dataset deposition
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  Class distribution is uneven — large structures like `cytoplasm` are
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  present in nearly every run, while small organelles (`vesicle`,
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- `endomembrane`) are sparse and `mitochondrion` / `nucleus` are present
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  in only a subset:
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  | Class | Total runs |
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  |---------------------|-----------:|
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  | `cytoplasm` | 19 |
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- | `endomembrane` | 18 |
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  | `vesicle` | 18 |
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  | `mitochondrion` | 9 |
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  | `nuclear-envelope` | 8 |
 
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  | `nucleus` | `nucleus` |
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  | `nuclear-envelope` | `nuclear envelope` |
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  | `vesicle` | `vesicle` |
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+ | `membrane-tubule` | `membrane-enclosed lumen` |
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  | `mitochondrion` | `mitochondrion` |
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  #### Splits
 
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  Class distribution is uneven — large structures like `cytoplasm` are
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  present in nearly every run, while small organelles (`vesicle`,
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+ `membrane-tubule`) are sparse and `mitochondrion` / `nucleus` are present
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  in only a subset:
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  | Class | Total runs |
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  |---------------------|-----------:|
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  | `cytoplasm` | 19 |
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+ | `membrane-tubule` | 18 |
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  | `vesicle` | 18 |
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  | `mitochondrion` | 9 |
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  | `nuclear-envelope` | 8 |
demos.ipynb CHANGED
@@ -193,14 +193,7 @@
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  {
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  "cell_type": "markdown",
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  "metadata": {},
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- "source": [
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- "## Yeast — multi-class organelle segmentation\n",
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- "\n",
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- "Six organelle classes (cytoplasm, nucleus, nuclear-envelope,\n",
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- "vesicle, endomembrane, mitochondrion) on 20 *S. pombe* tomograms\n",
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- "split 16/4 train/test. Low-data, class-imbalanced eukaryotic\n",
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- "counterpart to the bacterial benchmark.\n"
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- ],
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  "id": "aaf332964b36fdb3"
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  },
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  {
 
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  {
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  "cell_type": "markdown",
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  "metadata": {},
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+ "source": "## Yeast — multi-class organelle segmentation\n\nSix organelle classes (cytoplasm, nucleus, nuclear-envelope,\nvesicle, membrane-tubule, mitochondrion) on 20 *S. pombe* tomograms\nsplit 16/4 train/test. Low-data, class-imbalanced eukaryotic\ncounterpart to the bacterial benchmark.",
 
 
 
 
 
 
 
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  "id": "aaf332964b36fdb3"
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  },
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  {