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README.md
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## Dataset Features
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- **`image`**
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RGB JPEG images of individual insect specimens.
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- **Metadata fields**
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- **Indexing fields**
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- `processid`: A unique number assigned by BOLD (International Barcode of Life Consortium).
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- `sampleid`: A unique identifier given by the collector.
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- **Taxonomic labels**
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- `phylum`, `class`, `order`, `family`, `subfamily`, `genus`, `species`: Hierarchical taxonomic classification
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- **Genetic information**
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- `dna_bin`: Barcode Index Number
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- `dna_barcode`: DNA barcode sequence
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- **Geographic data**
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- `country`, `province_state`: Collection location
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- `coord-lat`, `coord-lon`: Latitude and longitude coordinates
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- **Specimen size data**
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- `image_measurement_value`: Measured image property (e.g., pixel area)
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- `area_fraction`: Fraction of the image occupied by the specimen
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- `scale_factor`: Relative size normalization factor
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- **Split and localization**
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- `split`: Data partition label (e.g., train, test, val)
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- `chunk`: Subdirectory label for scalable storage
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## Usage
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### 📑 Configurations
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| **`name`** | **Available `split` values** |
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|--------------------------------------------- |------------------------------------------------------------------- |
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| `cropped_256`, `original_256` | `pretrain`, `train`, `validation`, `test`, `val_unseen`, `test_unseen`, `key_unseen`, `other_heldout` |
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}
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```
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## Dataset Fields
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| **Field Group** | **Field(s)** | **Description** |
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|---------------------|------------------------------------------------------------------------------|---------------------------------------------------------------|
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| **Image** | `image` | RGB JPEG image of an individual insect specimen. |
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| **Indexing** | `processid`, `sampleid` | Unique identifiers from BOLD and the collector. |
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| **Taxonomy** | `phylum`, `class`, `order`, `family`, `subfamily`, `genus`, `species` | Hierarchical taxonomic classification. |
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| **Genetics** | `dna_bin`, `dna_barcode` | Barcode Index Number and DNA sequence. |
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| **Geography** | `country`, `province_state`, `coord-lat`, `coord-lon` | Collection location and geographic coordinates. |
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| **Specimen Size** | `image_measurement_value`, `area_fraction`, `scale_factor` | Image-based size measures and normalization factors. |
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| **Splits & Storage**| `split`, `chunk` | Data partition (e.g., train/test) and storage subdirectory. |
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## Usage
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### 📑 Configurations
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Each configuration loads specimen images along with associated metadata fields:
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| **`name`** | **Available `split` values** |
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|--------------------------------------------- |------------------------------------------------------------------- |
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| `cropped_256`, `original_256` | `pretrain`, `train`, `validation`, `test`, `val_unseen`, `test_unseen`, `key_unseen`, `other_heldout` |
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