debugging

SPIDER.py

@@ -67,7 +67,6 @@ def subset_file_list(all_files: List[str], subset_ids: Set[int]):
 def standardize_3D_image(
     image: np.ndarray,
     resize_shape: Tuple[int, int, int],
-    nearest_neighbor_interpolation: bool = False,
 ) -> np.ndarray:
     """Aligns dimensions of image to be (height, width, channels); resizes
     images to values specified in resize_shape; and rescales pixel values
@@ -97,6 +96,7 @@ def standardize_3D_mask(
         resize_shape,
         order=0,
         preserve_range=True,
+        mode='edge',
     )
     # Rescale to UInt8 type (required for PyArrow and PIL)
     mask = skimage.img_as_ubyte(mask)
@@ -515,8 +515,6 @@ class SPIDER(datasets.GeneratorBasedBuilder):
             image_array_standardized = standardize_3D_image(
                 image_array_original,
                 resize_shape,
-                nearest_neighbor_interpolation=False,
-                mode='edge',
             )
 
             # Load .mha mask file