Datasets:
Tasks:
Tabular Classification
Modalities:
Tabular
Languages:
No linguistic content
Size:
100K<n<1M
License:
Create README.md
Browse files
README.md
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---
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language:
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- zxx
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license: cc-by-4.0
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tags:
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- chemistry
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- mass-spectrometry
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- isotopic-patterns
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- binary-classification
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- chlorine
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pretty_name: Cl-Containing Compound (MS1 Features)
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size_categories:
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- 100K<n<1M
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source_datasets:
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- PubChem (molecular formulas)
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task_categories:
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- binary-classification
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task_ids:
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- binary-classification
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configs:
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- config_name: default
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data_files:
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- split: train
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path: 80%_618272_train_binary.rds
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- split: test
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path: 20%_154568_test_binary.rds
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dataset_info:
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features:
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- name: mz0 # mz of M
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dtype: float32
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- name: int2_o_int0 # M+2 / M
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dtype: float32
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- name: int1_o_int0 # M+1 / M
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dtype: float32
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- name: RI2_RI1 # (M+2/M) - (M+1/M)
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dtype: float32
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- name: mz_2_0 # mz(M+2) - mz(M)
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dtype: float32
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- name: mz_1_0 # mz(M+1) - mz(M)
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dtype: float32
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- name: has_cl # 1=Cl-containing, 0=non-Cl
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dtype: int8
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config_name: default
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---
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# Dataset Summary
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Binary classification of chlorine presence based on simulated MS1 isotopic patterns. MS1 peaks (M, M+1, M+2, M+3, M+4) were simulated for PubChem molecular formulas, and six features were engineered: mz0, int2_o_int0, int1_o_int0, RI2_RI1, mz_2_0, mz_1_0. Label has_cl indicates whether the formula contains chlorine.
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- Raw counts: 968,442 non-Cl; 386,420 Cl (1Cl: 185,303; 2Cl: 117,566; 3–5Cl: 83,551).
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- Balancing: downsampled non-Cl to 386,420 → total 772,840.
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- Splits: train 618,272 (80%), test 154,568 (20%).
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- Files: 968442_non_cl_filter_S10.rds, 386420_cl_data.rds, 80%_618272_train_binary.rds, 20%_154568_test_binary.rds.
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## Citation
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```bibtex
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@article{doi:10.1021/acs.analchem.3c05124,
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author = {Zhao, Tingting and Wawryk, Nicholas J. P. and Xing, Shipei and Low, Brian and Li, Gigi and Yu, Huaxu and Wang, Yukai and Shen, Qiming and Li, Xing-Fang and Huan, Tao},
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title = {ChloroDBPFinder: Machine Learning-Guided Recognition of Chlorinated Disinfection Byproducts from Nontargeted LC-HRMS Analysis},
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journal = {Analytical Chemistry},
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volume = {96},
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number = {6},
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pages = {2590-2598},
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year = {2024},
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doi = {10.1021/acs.analchem.3c05124},
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note = {PMID: 38294426},
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url = {https://doi.org/10.1021/acs.analchem.3c05124},
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eprint
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