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data/raw/fastq_anonymized/README.md ADDED
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+ # Anonymized FASTQ Reads
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+
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+ This folder contains paired-end sequencing reads prepared for the evaluation
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+ package.
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+
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+ The read names have been anonymized with deterministic neutral identifiers:
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+
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+ - `sample_1_read_000000001`, `sample_1_read_000000002`, and so on
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+ - `sample_2_read_000000001`, `sample_2_read_000000002`, and so on
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+
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+ Mate suffixes are preserved as `/1` and `/2`. Matching R1 and R2 reads share
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+ the same numeric identifier. Read sequences and quality strings are preserved
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+ from the source reads; only FASTQ read names and plus lines were rewritten.
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+
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+ Files:
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+
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+ - `sample_1_R1.fastq.gz`
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+ - `sample_1_R2.fastq.gz`
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+ - `sample_2_R1.fastq.gz`
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+ - `sample_2_R2.fastq.gz`
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