| function [derivs,uncomp]=compderivs(f,x,order) | |
| % [derivs,uncomp,U,W]=compderivs(f,x,order) differentiates f with respect to x | |
| % serveral times (given by order). The differentiation is done in | |
| % a compressed manner, by exploiting sparsity and symmetry of mixed derivatives. | |
| % The function returns two cell arrays. The first output contains the | |
| % nonzero unique derivatives up to the order defined by the user. The | |
| % second array contains matrices that uncompress the nonzero unique derivatives | |
| % into the full arrays of derivatives. U and W are compress/uncompress | |
| % matrices to unique elements. | |
| % | |
| % For details on the compressed differentiation routine see: | |
| % Levintal, Oren, "Fifth Order Perturbation Solution to DSGE Models". | |
| % | |
| % Input arguments: | |
| % f - a symbolic scalar. | |
| % x - a symbolic vector. | |
| % order - the maximum order of derivatives. For example, order=3 returns | |
| % the first, second and third derivatives. | |
| % | |
| % Output arguments: | |
| % derivs - a cell array of the nonzero unique derivatives. For example, | |
| % derivs{1} is a symbolic vector of the nonzero first derivatives, derivs{2} is a | |
| % symbolic vector of the nonzero unique second derivatives and so on. | |
| % uncomp - a cell array of sparse matrices that are used to uncompress the | |
| % compressed derivatives. For example, the full array of second order | |
| % derivatives is obtained by uncomp{2}*derivs{2}. | |
| % | |
| % Example: f=x1^3*x2^4, and x=[x1,x2], both are symbolic variables. | |
| % [derivs,uncomp]=compderivs(f,x,3) returns the first, second and third | |
| % compressed derivatives. The full array of third derivatives is obtained | |
| % by uncomp{3}*derivs{3}. This array can be reshaped into a 2-by-2-by-2 | |
| % array by the reshape function. | |
| % The i,j,l element of this array is the third derivative of f | |
| % w.r.t xi, xj and xl. | |
| % | |
| % This code can be used freely for non commercial purposes. | |
| % | |
| % � Copyright, Oren Levintal, June 13, 2016. | |
| n_x=length(x); | |
| derivs=cell(order,1); | |
| uncomp=cell(order,1); | |
| if n_x==1 | |
| tempderiv=f; | |
| for k=1:order | |
| tempderiv=jacobian(tempderiv,x); | |
| derivs{k}=tempderiv; | |
| if logical(tempderiv==0) | |
| uncomp{k}=sparse(0); | |
| else | |
| uncomp{k}=sparse(1); | |
| end | |
| end | |
| else | |
| tempderiv=jacobian(f,x); | |
| tempderiv=tempderiv(:); | |
| nnztempderiv=1-logical(tempderiv==0); | |
| tempind=find(nnztempderiv); | |
| countdf=sparse(tempind,ones(length(tempind),1),ones(length(tempind),1),numel(tempderiv),1); % counts nonzero derivatives. | |
| N1=sparse(tempind,1:sum(countdf),ones(1,sum(countdf)),n_x,sum(countdf)); | |
| uncomp{1}=N1; | |
| derivs{1}=tempderiv(countdf==1); | |
| for k=2:order | |
| tempderiv=jacobian(derivs{k-1}, x); | |
| nnztempderiv=1-logical(tempderiv==0); | |
| [i,j]=find(nnztempderiv); | |
| countdf_short=sparse(i,j,ones(length(i),1),size(tempderiv,1),size(tempderiv,2)); | |
| countdf=uncomp{k-1}*countdf_short; | |
| countdf=countdf(:); | |
| if nnz(countdf)>0 | |
| [U,W]=create_UW(n_x,k,countdf); | |
| N=sparse(find(countdf),1:sum(countdf),ones(1,sum(countdf)),n_x^k,sum(countdf)); | |
| tempmat=[U'*(N'*kron(speye(n_x),uncomp{k-1}))]; | |
| [i,j]=find(tempmat'); | |
| tempderiv=tempderiv(i); | |
| [colM,rowM]=find(N); | |
| [rowW,colW]=find(W); | |
| tempuncomp=sparse(size(N,1),size(W,1)); | |
| tempeye=speye(size(W,1)); | |
| tempuncomp(colM,:)=tempeye(rowW,:); | |
| else | |
| tempderiv=sym(0); | |
| tempuncomp=sparse(n_x^k,1); | |
| end | |
| derivs{k}=tempderiv; | |
| uncomp{k}=tempuncomp; | |
| end | |
| end | |
| end | |
| function [U,W]=create_UW(n,k,varargin) | |
| % [U,W]=create_UW(n,k) creates two sparse matrices, U and W, that compress and | |
| % uncompress a symmetric array A with k dimensions and n^k elements. | |
| % A(:)'*U is a row vector that contains the unique elements of A, | |
| % and A(:)'=(A(:)'*U)*W. | |
| % [U,W]=create_UW(n,k,N) creates matrices U and W of a sparse symmetric | |
| % array A with k dimensions and n^k elements. N is a vector of size n^k, | |
| % where N(j)=1 if A(j)~=0 and zero otherwise. If B is a row | |
| % vector with the nonzero elements of the row vector A(:)', then B*U | |
| % is a row vector of the unique nonzero elements of A, and B=(B*U)*W. | |
| % | |
| % This code can be used freely for non commercial purposes, provided that | |
| % it is not altered. | |
| % | |
| % (c) Oren Levintal, December 20, 2013 | |
| if isempty(varargin) | |
| % nonzero=ones(n^k,1); | |
| I=[1:n^k]; | |
| else | |
| nonzero=varargin{1}; | |
| I=find(nonzero); | |
| end | |
| if isempty(I) | |
| error('The symmetric array is all zero') | |
| end | |
| I=I(:); | |
| % nonzero(nonzero~=0)=1; nonzero=nonzero(:); | |
| sizeM='n'; | |
| subind='I1'; | |
| for i=2:k | |
| sizeM=[sizeM ' n']; | |
| subind=[subind ',I' num2str(i) ]; | |
| end | |
| eval(['[' subind ']=ind2sub([' sizeM '],I);']); % I is a linear index of all nonzero elements. | |
| eval(['M=[' subind '];']); | |
| M=sort(M,2); % sort columns | |
| [M,I]=sortrows(M); % sort rows | |
| if size(M,1)==1 | |
| DM=1; | |
| else | |
| DM=[1;(sum(abs(diff(M)),2)~=0)]; | |
| end | |
| group=cumsum(DM); | |
| minI=accumarray(group,I,[],@min); | |
| newi=minI(group); | |
| unique=newi(DM>0); % index of unique nonzero elements | |
| n_unique=length(unique); | |
| U= sparse(unique,[1:n_unique]',ones(n_unique,1),length(I),n_unique); | |
| W= sparse(group,I,ones(length(I),1),n_unique,length(I)); | |
| end | |