import os from lib.utilities import serialize from lib.data_helpers import data_utils from lib.experiment_specs import study_config def select_test_appcodes(mc): """ purpose: selects a set of appcodes whose data will be used to test the pipeline quickly. Specifically, it selects 50 active appcodes (i.e. have use data in past 3 days) and 25 appcodes inactive appcodes input: the clean master user df """ last_survey_complete = data_utils.get_last_survey() code = study_config.surveys[last_survey_complete]["Code"] print(f"\n Selecting test codes. last survey complete is {last_survey_complete}") active_appcodes = list(mc.loc[(mc[f"{code}_Complete"]=="Complete")&(mc["ActiveStatus"]=="Normal"),"AppCode"]) inactive_appcodes = list(mc.loc[(mc[f"R_Complete"]!="Complete"),"AppCode"]) test_codes = {"AppCode":active_appcodes[50:100]+inactive_appcodes[25:50]} serialize.save_pickle(test_codes, path = os.path.join("data","external","dropbox_confidential_test","TestCodes"),df_bool = False) return test_codes def save_test_df(df, path): """ subsets the df to include testcodes Parameters ---------- df - any df that is about to get saved path - the path to save the df (in the test data folders) """ # only subset the df if the run is not a test b/c during a test run, the file has already been subsetted! config_user_dict = serialize.open_yaml("config_user.yaml") if config_user_dict["local"]["test"] == False: test_codes = serialize.open_pickle(os.path.join("data", "external", "dropbox_confidential_test", "TestCodes"), df_bool=False) test_appcodes = test_codes["AppCode"] df = df.loc[df["AppCode"].isin(test_appcodes)] serialize.save_pickle(df,path) print(df.dtypes) try: serialize.save_hdf(df, path) except: print("couldn't save hdf!")