#!/usr/bin/python # ENVIRONMENT import os import importlib import shutil import subprocess import sys try: import git import yaml from termcolor import colored import colorama colorama.init() except: print("Please ensure that conda env is activated and that git,") print("yaml, termcolor, and colorama are in conda_env.yaml") raise Exception ROOT = '..' ### LOAD GSLAB MAKE spec = importlib.util.spec_from_file_location('gslab_make', os.path.join(ROOT, 'lib', 'gslab_make', '__init__.py')) gs = importlib.util.module_from_spec(spec) sys.modules['gslab_make'] = gs spec.loader.exec_module(gs) default_executables = gs.private.metadata.default_executables format_message = gs.private.utility.format_message # GENERAL FUNCTIONS def parse_yaml_files(config = '../config.yaml', config_user = '../config_user.yaml'): if not os.path.isfile(config_user): shutil.copy('config_user_template.yaml', config_user) config = yaml.load(open(config, 'rb'), Loader = yaml.Loader) config_user = yaml.load(open(config_user, 'rb'), Loader = yaml.Loader) return(config, config_user) def check_executable(executable): if os.name == 'posix': try: subprocess.check_output('which %s' % executable, shell = True) except: error_message = "Please set up '%s' for command-line use on your system" % executable error_message = format_message(error_message) raise gs.private.exceptionclasses.ColoredError(error_message) if os.name == 'nt': try: subprocess.check_output('where %s' % executable, shell = True) except: try: subprocess.check_output('dir %s' % executable, shell = True) except: error_message = "Please set up `%s` for command-line use on your system" % executable error_message = format_message(error_message) raise gs.private.exceptionclasses.ColoredError(error_message, '') def check_software(config, config_user): default_executables[os.name].update(config_user['local']['executables']) if config['git_lfs_required']: check_executable(default_executables[os.name]['git-lfs']) software_list = config['software_required'] software_list = {key:value for (key, value) in software_list.items() if value == True} software_list = {key:default_executables[os.name][key] for (key, value) in software_list.items()} for software in software_list.values(): check_executable(software) def check_external_paths(config_user): if config_user['external']: for path in config_user['external'].values(): if not os.path.exists(path): error_message = 'ERROR! Path `%s` listed in `config_user.yaml` but cannot be found.' % path error_message = format_message(error_message) raise gs.private.exceptionclasses.ColoredError(error_message) def configuration(): (config, config_user) = parse_yaml_files() check_software(config, config_user) check_external_paths(config_user) message = format_message('SUCCESS! Setup complete.') print(colored(message, 'green')) # EXECUTE configuration()