gpwolfe commited on
Commit
c7f1bb8
·
verified ·
1 Parent(s): c5d16f5

Add JARVIS_CFID_OQMD files

Browse files
Files changed (4) hide show
  1. README.md +55 -0
  2. co/co_0.parquet +3 -0
  3. co/co_1.parquet +3 -0
  4. ds.parquet +3 -0
README.md ADDED
@@ -0,0 +1,55 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ---
2
+ configs:
3
+ - config_name: default
4
+ data_files: "co/*.parquet"
5
+ - config_name: info
6
+ data_files: "ds.parquet"
7
+ license: unknown
8
+ tags:
9
+ - molecular dynamics
10
+ - mlip
11
+ - interatomic potential
12
+ pretty_name: JARVIS CFID OQMD
13
+ ---
14
+ ### <details><summary>Cite this dataset </summary>Kirklin, S., Saal, J. E., Meredig, B., Thompson, A., Doak, J. W., Aykol, M., Rühl, S., and Wolverton, C. _JARVIS CFID OQMD_. ColabFit, 2023. https://doi.org/10.60732/967596c1</details>
15
+ #### This dataset has been curated and formatted for the ColabFit Exchange
16
+ #### This dataset is also available on the ColabFit Exchange:
17
+ https://materials.colabfit.org/id/DS_u8strp7hm0cy_0
18
+ #### Visit the ColabFit Exchange to search additional datasets by author, description, element content and more.
19
+ https://materials.colabfit.org
20
+ <br><hr>
21
+ # Dataset Name
22
+ JARVIS CFID OQMD
23
+ ### Description
24
+ The JARVIS_CFID_OQMD dataset is part of the joint automated repository for various integrated simulations (JARVIS) database. This dataset contains configurations from the Open Quantum Materials Database (OQMD), created to hold information about the electronic structure and stability of organic materials for the purpose of aiding in materials discovery. Calculations were performed at the DFT level of theory, using the PAW-PBE functional implemented by VASP. This dataset also includes classical force-field inspired descriptors (CFID) for each configuration. JARVIS is a set of tools and collected datasets built to meet current materials design challenges.
25
+ ### Dataset authors
26
+ Scott Kirklin, James E Saal, Bryce Meredig, Alex Thompson, Jeff W Doak, Muratahan Aykol, Stephan Rühl, Chris Wolverton
27
+ ### Publication
28
+ https://doi.org/10.1038/npjcompumats.2015.10
29
+ ### Original data link
30
+ https://ndownloader.figshare.com/files/24981170
31
+ ### License
32
+ unknown
33
+ ### Number of unique molecular configurations
34
+ 459943
35
+ ### Number of atoms
36
+ 2365987
37
+ ### Elements included
38
+ Ac, Ag, Al, Ar, As, Au, B, Ba, Be, Bi, Br, C, Ca, Cd, Ce, Cl, Co, Cr, Cs, Cu, Dy, Er, Eu, F, Fe, Ga, Gd, Ge, H, He, Hf, Hg, Ho, I, In, Ir, K, Kr, La, Li, Lu, Mg, Mn, Mo, N, Na, Nb, Nd, Ne, Ni, Np, O, Os, P, Pa, Pb, Pd, Pm, Pr, Pt, Pu, Rb, Re, Rh, Ru, S, Sb, Sc, Se, Si, Sm, Sn, Sr, Ta, Tb, Tc, Te, Th, Ti, Tl, Tm, U, V, W, Xe, Y, Yb, Zn, Zr
39
+ ### Properties included
40
+ formation energy, cauchy stress
41
+ <br>
42
+ <hr>
43
+
44
+ # Usage
45
+ - `ds.parquet` : Aggregated dataset information.
46
+ - `co/` directory: Configuration rows each include a structure, calculated properties, and metadata.
47
+ - `cs/` directory : Configuration sets are subsets of configurations grouped by some common characteristic. If `cs/` does not exist, no configurations sets have been defined for this dataset.
48
+ - `cs_co_map/` directory : The mapping of configurations to configuration sets (if defined).
49
+ <br>
50
+ #### ColabFit Exchange documentation includes descriptions of content and example code for parsing parquet files:
51
+ - [Parquet parsing: example code](https://materials.colabfit.org/docs/how_to_use_parquet)
52
+ - [Dataset info schema](https://materials.colabfit.org/docs/dataset_schema)
53
+ - [Configuration schema](https://materials.colabfit.org/docs/configuration_schema)
54
+ - [Configuration set schema](https://materials.colabfit.org/docs/configuration_set_schema)
55
+ - [Configuration set to configuration mapping schema](https://materials.colabfit.org/docs/cs_co_mapping_schema)
co/co_0.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d90e0d65320847b2fff873673bf9911f79e60e3cd6d08414a411938742f95dec
3
+ size 2851337662
co/co_1.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4ce6de05615c8d5039ecd1a9e15c7f67690e9ddae8391577169c5df7cb8a6d20
3
+ size 428561999
ds.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e91c3ef25de1b55db2769863f0701e37812eeff97f4da10fe91958aaffc816bc
3
+ size 20003