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Add OrbNet_Denali files

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  1. README.md +55 -0
  2. co/co_0.parquet +3 -0
  3. co/co_1.parquet +3 -0
  4. co/co_2.parquet +3 -0
  5. ds.parquet +3 -0
README.md ADDED
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+ ---
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+ configs:
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+ - config_name: default
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+ data_files: "co/*.parquet"
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+ - config_name: info
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+ data_files: "ds.parquet"
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+ license: cc-by-4.0
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+ tags:
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+ - molecular dynamics
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+ - mlip
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+ - interatomic potential
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+ pretty_name: OrbNet Denali
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+ ---
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+ ### <details><summary>Cite this dataset </summary>Christensen, A. S., Sirumalla, S. K., Qiao, Z., OConnor, M. B., Smith, D. G. A., Ding, F., Bygrave, P. J., Anandkumar, A., Welborn, M., Manby, F. R., and III, T. F. M. _OrbNet Denali_. ColabFit, 2023. https://doi.org/10.60732/b6043e2b</details>
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+ #### This dataset has been curated and formatted for the ColabFit Exchange
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+ #### This dataset is also available on the ColabFit Exchange:
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+ https://materials.colabfit.org/id/DS_5obi9nxcgmof_0
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+ #### Visit the ColabFit Exchange to search additional datasets by author, description, element content and more.
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+ https://materials.colabfit.org
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+ <br><hr>
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+ # Dataset Name
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+ OrbNet Denali
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+ ### Description
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+ All DFT single-point calculations for the OrbNet Denali training set were carried out in Entos Qcore version 0.8.17 at the ωB97X-D3/def2-TZVP level of theory using in-core density fitting with the neese=4 DFT integration grid.
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+ ### Dataset authors
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+ Anders S. Christensen, Sai Krishna Sirumalla, Zhuoran Qiao, Michael B. OConnor, Daniel G. A. Smith, Feizhi Ding, Peter J. Bygrave, Animashree Anandkumar, Matthew Welborn, Frederick R. Manby, Thomas F. Miller III
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+ ### Publication
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+ https://doi.org/10.1063/5.0061990
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+ ### Original data link
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+ https://doi.org/10.6084/m9.figshare.14883867.v2
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+ ### License
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+ CC-BY-4.0
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+ ### Number of unique molecular configurations
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+ 2337230
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+ ### Number of atoms
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+ 104937852
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+ ### Elements included
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+ B, Br, C, Ca, Cl, F, H, I, K, Li, Mg, N, Na, O, P, S, Si
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+ ### Properties included
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+ energy, cauchy stress
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+ <br>
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+ <hr>
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+
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+ # Usage
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+ - `ds.parquet` : Aggregated dataset information.
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+ - `co/` directory: Configuration rows each include a structure, calculated properties, and metadata.
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+ - `cs/` directory : Configuration sets are subsets of configurations grouped by some common characteristic. If `cs/` does not exist, no configurations sets have been defined for this dataset.
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+ - `cs_co_map/` directory : The mapping of configurations to configuration sets (if defined).
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+ <br>
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+ #### ColabFit Exchange documentation includes descriptions of content and example code for parsing parquet files:
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+ - [Parquet parsing: example code](https://materials.colabfit.org/docs/how_to_use_parquet)
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+ - [Dataset info schema](https://materials.colabfit.org/docs/dataset_schema)
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+ - [Configuration schema](https://materials.colabfit.org/docs/configuration_schema)
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+ - [Configuration set schema](https://materials.colabfit.org/docs/configuration_set_schema)
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+ - [Configuration set to configuration mapping schema](https://materials.colabfit.org/docs/cs_co_mapping_schema)
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