Datasets:
Add QM-22 files
Browse files- README.md +59 -0
- co/co_0.parquet +3 -0
- cs/cs_0.parquet +3 -0
- cs_co_map/cs_co_map_0.parquet +3 -0
- ds.parquet +3 -0
README.md
ADDED
|
@@ -0,0 +1,59 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
---
|
| 2 |
+
configs:
|
| 3 |
+
- config_name: default
|
| 4 |
+
data_files: "co/*.parquet"
|
| 5 |
+
- config_name: info
|
| 6 |
+
data_files: "ds.parquet"
|
| 7 |
+
- config_name: configuration_sets
|
| 8 |
+
data_files: "cs/*.parquet"
|
| 9 |
+
- config_name: config_set_mapping
|
| 10 |
+
data_files: "cs_co_map/*.parquet"
|
| 11 |
+
license: cc0-1.0
|
| 12 |
+
tags:
|
| 13 |
+
- molecular dynamics
|
| 14 |
+
- mlip
|
| 15 |
+
- interatomic potential
|
| 16 |
+
pretty_name: QM-22
|
| 17 |
+
---
|
| 18 |
+
### <details><summary>Cite this dataset </summary>Bowman, J. M., Qu, C., Conte, R., Nandi, A., Houston, P. L., and Yu, Q. _QM-22_. ColabFit, 2023. https://doi.org/10.60732/999055f6</details>
|
| 19 |
+
#### This dataset has been curated and formatted for the ColabFit Exchange
|
| 20 |
+
#### This dataset is also available on the ColabFit Exchange:
|
| 21 |
+
https://materials.colabfit.org/id/DS_2qq05tdbyovn_0
|
| 22 |
+
#### Visit the ColabFit Exchange to search additional datasets by author, description, element content and more.
|
| 23 |
+
https://materials.colabfit.org
|
| 24 |
+
<br><hr>
|
| 25 |
+
# Dataset Name
|
| 26 |
+
QM-22
|
| 27 |
+
### Description
|
| 28 |
+
Includes CHON molecules of 4-15 atoms, developed in counterpoint to the MD17 dataset, run at higher total energies (above 500 K) and with a broader configuration space.
|
| 29 |
+
### Dataset authors
|
| 30 |
+
Joel M. Bowman, Chen Qu, Riccardo Conte, Apurba Nandi, Paul L. Houston, Qi Yu
|
| 31 |
+
### Publication
|
| 32 |
+
https://doi.org/10.1063/5.0089200
|
| 33 |
+
### Original data link
|
| 34 |
+
https://github.com/jmbowma/QM-22
|
| 35 |
+
### License
|
| 36 |
+
CC0-1.0
|
| 37 |
+
### Number of unique molecular configurations
|
| 38 |
+
6762
|
| 39 |
+
### Number of atoms
|
| 40 |
+
101430
|
| 41 |
+
### Elements included
|
| 42 |
+
C, H, O
|
| 43 |
+
### Properties included
|
| 44 |
+
energy, cauchy stress
|
| 45 |
+
<br>
|
| 46 |
+
<hr>
|
| 47 |
+
|
| 48 |
+
# Usage
|
| 49 |
+
- `ds.parquet` : Aggregated dataset information.
|
| 50 |
+
- `co/` directory: Configuration rows each include a structure, calculated properties, and metadata.
|
| 51 |
+
- `cs/` directory : Configuration sets are subsets of configurations grouped by some common characteristic. If `cs/` does not exist, no configurations sets have been defined for this dataset.
|
| 52 |
+
- `cs_co_map/` directory : The mapping of configurations to configuration sets (if defined).
|
| 53 |
+
<br>
|
| 54 |
+
#### ColabFit Exchange documentation includes descriptions of content and example code for parsing parquet files:
|
| 55 |
+
- [Parquet parsing: example code](https://materials.colabfit.org/docs/how_to_use_parquet)
|
| 56 |
+
- [Dataset info schema](https://materials.colabfit.org/docs/dataset_schema)
|
| 57 |
+
- [Configuration schema](https://materials.colabfit.org/docs/configuration_schema)
|
| 58 |
+
- [Configuration set schema](https://materials.colabfit.org/docs/configuration_set_schema)
|
| 59 |
+
- [Configuration set to configuration mapping schema](https://materials.colabfit.org/docs/cs_co_mapping_schema)
|
co/co_0.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:49c268aa9cdac81b315047c1e4943d7dd2338475ceaba4c780873210fcbdc458
|
| 3 |
+
size 3760615
|
cs/cs_0.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:977d1dd6d6c3d53c0f486624ae7ea941a166f791bedbf12f87a2b7100e7e2eb8
|
| 3 |
+
size 7348
|
cs_co_map/cs_co_map_0.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:e08e95ecfae5a4ed762cdb75fd0907793277c35ef840e2bc93ca028091a423c3
|
| 3 |
+
size 85928
|
ds.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:78055844b9403c1081b7ec2be9ff0456c0be36c9ef30318b3242569c0f029b80
|
| 3 |
+
size 16359
|