gpwolfe commited on
Commit
820099a
·
verified ·
1 Parent(s): 900d9ab

Add Si-H-GAP_validation files

Browse files
Files changed (3) hide show
  1. README.md +55 -0
  2. co/co_0.parquet +3 -0
  3. ds.parquet +3 -0
README.md ADDED
@@ -0,0 +1,55 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ---
2
+ configs:
3
+ - config_name: default
4
+ data_files: "co/*.parquet"
5
+ - config_name: info
6
+ data_files: "ds.parquet"
7
+ license: cc-by-4.0
8
+ tags:
9
+ - molecular dynamics
10
+ - mlip
11
+ - interatomic potential
12
+ pretty_name: Si-H-GAP validation
13
+ ---
14
+ ### <details><summary>Cite this dataset </summary>Unruh, D., Meidanshahi, R. V., Goodnick, S. M., Csányi, G., and Zimányi, G. T. _Si-H-GAP validation_. ColabFit, 2023. https://doi.org/10.60732/d2f86b68</details>
15
+ #### This dataset has been curated and formatted for the ColabFit Exchange
16
+ #### This dataset is also available on the ColabFit Exchange:
17
+ https://materials.colabfit.org/id/DS_vywqeohskg2j_0
18
+ #### Visit the ColabFit Exchange to search additional datasets by author, description, element content and more.
19
+ https://materials.colabfit.org
20
+ <br><hr>
21
+ # Dataset Name
22
+ Si-H-GAP validation
23
+ ### Description
24
+ A set of validation configurations of hydrogenated liquid and amorphous silicon from the datasets for Si-H-GAP. These configurations served to augment the reference set as a final benchmark for NEP model performance.
25
+ ### Dataset authors
26
+ Davis Unruh, Reza Vatan Meidanshahi, Stephen M. Goodnick, Gábor Csányi, Gergely T. Zimányi
27
+ ### Publication
28
+ https://doi.org/10.1103/PhysRevMaterials.6.065603
29
+ ### Original data link
30
+ https://github.com/dgunruh/Si-H-GAP
31
+ ### License
32
+ CC-BY-4.0
33
+ ### Number of unique molecular configurations
34
+ 150
35
+ ### Number of atoms
36
+ 23000
37
+ ### Elements included
38
+ H, Si
39
+ ### Properties included
40
+ energy, cauchy stress
41
+ <br>
42
+ <hr>
43
+
44
+ # Usage
45
+ - `ds.parquet` : Aggregated dataset information.
46
+ - `co/` directory: Configuration rows each include a structure, calculated properties, and metadata.
47
+ - `cs/` directory : Configuration sets are subsets of configurations grouped by some common characteristic. If `cs/` does not exist, no configurations sets have been defined for this dataset.
48
+ - `cs_co_map/` directory : The mapping of configurations to configuration sets (if defined).
49
+ <br>
50
+ #### ColabFit Exchange documentation includes descriptions of content and example code for parsing parquet files:
51
+ - [Parquet parsing: example code](https://materials.colabfit.org/docs/how_to_use_parquet)
52
+ - [Dataset info schema](https://materials.colabfit.org/docs/dataset_schema)
53
+ - [Configuration schema](https://materials.colabfit.org/docs/configuration_schema)
54
+ - [Configuration set schema](https://materials.colabfit.org/docs/configuration_set_schema)
55
+ - [Configuration set to configuration mapping schema](https://materials.colabfit.org/docs/cs_co_mapping_schema)
co/co_0.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7f39e5c3d6ca189879818db9e4d4731af5a301bd8748f8a21415dad6f60bc050
3
+ size 713529
ds.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e466e32dcce250ecc2c2a3c5a9f659a477b8ddf07f75f9d5847c874c09cc432b
3
+ size 16925