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Add sGDML_Benzene_DFT_NC2018 files

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  1. README.md +55 -0
  2. co/co_0.parquet +3 -0
  3. ds.parquet +3 -0
README.md ADDED
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+ ---
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+ configs:
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+ - config_name: default
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+ data_files: "co/*.parquet"
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+ - config_name: info
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+ data_files: "ds.parquet"
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+ license: mit
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+ tags:
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+ - molecular dynamics
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+ - mlip
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+ - interatomic potential
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+ pretty_name: sGDML Benzene DFT NC2018
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+ ---
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+ ### <details><summary>Cite this dataset </summary>Chmiela, S., Sauceda, H. E., Müller, K., and Tkatchenko, A. _sGDML Benzene DFT NC2018_. ColabFit, 2023. https://doi.org/10.60732/18404d62</details>
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+ #### This dataset has been curated and formatted for the ColabFit Exchange
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+ #### This dataset is also available on the ColabFit Exchange:
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+ https://materials.colabfit.org/id/DS_q9y1aat05u42_0
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+ #### Visit the ColabFit Exchange to search additional datasets by author, description, element content and more.
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+ https://materials.colabfit.org
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+ <br><hr>
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+ # Dataset Name
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+ sGDML Benzene DFT NC2018
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+ ### Description
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+ The data used for training the DFT models were created running ab initio MD in the NVT ensemble using the Nosé-Hoover thermostat at 500 K during a 200 ps simulation with a resolution of 0.5 fs. Forces and energies were computed using all-electrons at the generalized gradient approximation level of theory with the Perdew-Burke-Ernzerhof (PBE) exchange-correlation functional, treating van der Waals interactions with the Tkatchenko-Scheffler (TS) method. All calculations were performed with FHI-aims. The final training data was generated by subsampling the full trajectory under preservation of the Maxwell-Boltzmann distribution for the energies.
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+ ### Dataset authors
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+ Stefan Chmiela, Huziel E. Sauceda, Klaus-Robert Müller, Alexandre Tkatchenko
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+ ### Publication
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+ https://doi.org/10.1126/sciadv.1603015
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+ ### Original data link
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+ http://sgdml.org/
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+ ### License
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+ MIT
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+ ### Number of unique molecular configurations
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+ 49862
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+ ### Number of atoms
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+ 598344
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+ ### Elements included
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+ C, H
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+ ### Properties included
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+ energy, atomic forces, cauchy stress
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+ <br>
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+ <hr>
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+
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+ # Usage
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+ - `ds.parquet` : Aggregated dataset information.
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+ - `co/` directory: Configuration rows each include a structure, calculated properties, and metadata.
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+ - `cs/` directory : Configuration sets are subsets of configurations grouped by some common characteristic. If `cs/` does not exist, no configurations sets have been defined for this dataset.
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+ - `cs_co_map/` directory : The mapping of configurations to configuration sets (if defined).
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+ <br>
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+ #### ColabFit Exchange documentation includes descriptions of content and example code for parsing parquet files:
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+ - [Parquet parsing: example code](https://materials.colabfit.org/docs/how_to_use_parquet)
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+ - [Dataset info schema](https://materials.colabfit.org/docs/dataset_schema)
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+ - [Configuration schema](https://materials.colabfit.org/docs/configuration_schema)
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+ - [Configuration set schema](https://materials.colabfit.org/docs/configuration_set_schema)
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+ - [Configuration set to configuration mapping schema](https://materials.colabfit.org/docs/cs_co_mapping_schema)
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