Datasets:
Upload folder using huggingface_hub
Browse files- harness/README.md +8 -0
- harness/concept_head.py +99 -0
- harness/label_shards.py +3 -2
harness/README.md
CHANGED
|
@@ -41,3 +41,11 @@ only the naming head, not the segmenter.
|
|
| 41 |
|
| 42 |
`DATASET_SPEC.md` records the sufficiency analysis and the label-QC audit
|
| 43 |
trail (including the snow-on-clouds failure and its fix).
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 41 |
|
| 42 |
`DATASET_SPEC.md` records the sufficiency analysis and the label-QC audit
|
| 43 |
trail (including the snow-on-clouds failure and its fix).
|
| 44 |
+
|
| 45 |
+
## 4. Name (query-time captioning head)
|
| 46 |
+
- `concept_head.py tag1 [tag2 ...]` — 22-dim deterministic token features
|
| 47 |
+
(log-area, roundness, solidity, eccentricity, log-Hu, per-band mean/std,
|
| 48 |
+
NDVI) -> 2-layer MLP over taxonomy concepts, trained on the SAM 3.1 labels,
|
| 49 |
+
temporal holdout. Prototype: 70.2% top-1 vs 38.6% majority baseline over
|
| 50 |
+
24 concepts. Captions are assembled from EXACT facts + this head's
|
| 51 |
+
INFERRED concept (scored), never generated free-form.
|
harness/concept_head.py
ADDED
|
@@ -0,0 +1,99 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
"""Stage 3 prototype: the naming head. Deterministic token features ->
|
| 2 |
+
taxonomy concept, trained on the SAM 3.1 INFERRED labels in cp500/hyperkd-rs.
|
| 3 |
+
|
| 4 |
+
Features per sample (all computable at query time without any big model):
|
| 5 |
+
shape (log-area, perimeter^2/area roundness, solidity, eccentricity, 7 log-Hu)
|
| 6 |
+
+ spectral (mean/std of r,g,b,nir inside the mask + NDVI mean) = 22 dims.
|
| 7 |
+
Head: 2-layer MLP, single-label over the concepts seen in training spots
|
| 8 |
+
(each sample's highest-score label wins; nuisance and domain concepts mix).
|
| 9 |
+
|
| 10 |
+
Temporal holdout: last 2 scenes of each spot are val.
|
| 11 |
+
Usage: python concept_head.py tag1 tag2 ...
|
| 12 |
+
"""
|
| 13 |
+
import pathlib, sys, collections
|
| 14 |
+
import numpy as np
|
| 15 |
+
import cv2
|
| 16 |
+
import torch
|
| 17 |
+
import torch.nn.functional as F
|
| 18 |
+
from huggingface_hub import hf_hub_download
|
| 19 |
+
|
| 20 |
+
torch.manual_seed(0); np.random.seed(0)
|
| 21 |
+
HERE = pathlib.Path(__file__).parent
|
| 22 |
+
TAGS = [a for a in sys.argv[1:] if not a.startswith("--")]
|
| 23 |
+
|
| 24 |
+
def feats(mask, ms):
|
| 25 |
+
m8 = (mask > 0).astype(np.uint8)
|
| 26 |
+
a = m8.sum()
|
| 27 |
+
cs, _ = cv2.findContours(m8, cv2.RETR_EXTERNAL, cv2.CHAIN_APPROX_SIMPLE)
|
| 28 |
+
big = max(cs, key=cv2.contourArea)
|
| 29 |
+
per = cv2.arcLength(big, True)
|
| 30 |
+
hull = cv2.convexHull(big)
|
| 31 |
+
sol = cv2.contourArea(big) / max(cv2.contourArea(hull), 1)
|
| 32 |
+
rnd = 4 * np.pi * a / max(per * per, 1)
|
| 33 |
+
if len(big) >= 5:
|
| 34 |
+
(_, _), (MA, ma), _ = cv2.fitEllipse(big)
|
| 35 |
+
ecc = ma / max(MA, 1e-3)
|
| 36 |
+
else:
|
| 37 |
+
ecc = 1.0
|
| 38 |
+
hu = cv2.HuMoments(cv2.moments(m8)).flatten()
|
| 39 |
+
hu = np.sign(hu) * np.log1p(np.abs(hu) * 1e7)
|
| 40 |
+
# spectral: mask is 256-grid, multispec is 160-grid
|
| 41 |
+
m160 = cv2.resize(m8, (160, 160), interpolation=cv2.INTER_NEAREST) > 0
|
| 42 |
+
px = ms[m160]
|
| 43 |
+
if len(px) == 0: px = ms.reshape(-1, 4)
|
| 44 |
+
mu, sd = px.mean(0), px.std(0)
|
| 45 |
+
ndvi = ((px[:, 3] - px[:, 0]) / np.clip(px[:, 3] + px[:, 0], 1e-3, None)).mean()
|
| 46 |
+
return np.concatenate([[np.log1p(a), rnd, sol, ecc], hu, mu, sd, [ndvi]]).astype(np.float32)
|
| 47 |
+
|
| 48 |
+
X_tr, y_tr, X_va, y_va, names = [], [], [], [], {}
|
| 49 |
+
for tag in TAGS:
|
| 50 |
+
sh = np.load(HERE / f"shard_{tag}.npz")
|
| 51 |
+
lf = hf_hub_download("cp500/hyperkd-rs", f"labels/labels_{tag}.npz", repo_type="dataset")
|
| 52 |
+
lb = np.load(lf)
|
| 53 |
+
sl, cn = lb["sample_labels"], lb["concepts"]
|
| 54 |
+
best = {}
|
| 55 |
+
for i, ci, sc, iou in sl:
|
| 56 |
+
i = int(i)
|
| 57 |
+
if i not in best or sc > best[i][1]: best[i] = (str(cn[int(ci)]), sc)
|
| 58 |
+
cut = len(sh["images"]) - 2
|
| 59 |
+
for i, (cname, _) in best.items():
|
| 60 |
+
r = sh["samples"][i]; si = int(r[0]); ch = int(r[6]); mi = int(r[3 + ch])
|
| 61 |
+
if mi < 0: continue
|
| 62 |
+
ci = names.setdefault(cname, len(names))
|
| 63 |
+
f = feats(sh["masks"][mi], sh["multispec"][si].astype(np.float32))
|
| 64 |
+
(X_tr if si < cut else X_va).append(f)
|
| 65 |
+
(y_tr if si < cut else y_va).append(ci)
|
| 66 |
+
print(f"{tag}: {len(best)} labelled samples")
|
| 67 |
+
X_tr, X_va = np.stack(X_tr), np.stack(X_va)
|
| 68 |
+
mu, sd = X_tr.mean(0), X_tr.std(0) + 1e-6
|
| 69 |
+
X_tr, X_va = (X_tr - mu) / sd, (X_va - mu) / sd
|
| 70 |
+
y_tr, y_va = np.array(y_tr), np.array(y_va)
|
| 71 |
+
K = len(names)
|
| 72 |
+
print(f"{len(X_tr)} train / {len(X_va)} val, {K} concepts")
|
| 73 |
+
|
| 74 |
+
m = torch.nn.Sequential(torch.nn.Linear(X_tr.shape[1], 128), torch.nn.ReLU(),
|
| 75 |
+
torch.nn.Linear(128, 128), torch.nn.ReLU(),
|
| 76 |
+
torch.nn.Linear(128, K))
|
| 77 |
+
opt = torch.optim.Adam(m.parameters(), 1e-3)
|
| 78 |
+
Xt, yt = torch.tensor(X_tr), torch.tensor(y_tr)
|
| 79 |
+
Xv, yv = torch.tensor(X_va), torch.tensor(y_va)
|
| 80 |
+
for ep in range(300):
|
| 81 |
+
idx = torch.randperm(len(Xt))[:512]
|
| 82 |
+
loss = F.cross_entropy(m(Xt[idx]), yt[idx])
|
| 83 |
+
opt.zero_grad(); loss.backward(); opt.step()
|
| 84 |
+
with torch.no_grad():
|
| 85 |
+
pr = m(Xv).argmax(1)
|
| 86 |
+
acc = (pr == yv).float().mean().item()
|
| 87 |
+
# majority-class baseline
|
| 88 |
+
base = collections.Counter(y_tr.tolist()).most_common(1)[0][1] / len(y_tr)
|
| 89 |
+
maj = (yv == collections.Counter(y_tr.tolist()).most_common(1)[0][0]).float().mean().item()
|
| 90 |
+
print(f"val top-1 {acc:.3f} vs majority-class {maj:.3f} ({K} classes)")
|
| 91 |
+
inv = {v: k for k, v in names.items()}
|
| 92 |
+
with torch.no_grad():
|
| 93 |
+
for ci in range(K):
|
| 94 |
+
sel = yv == ci
|
| 95 |
+
if sel.sum() < 5: continue
|
| 96 |
+
a = (pr[sel] == ci).float().mean().item()
|
| 97 |
+
print(f" {inv[ci].split('/')[-1][:34]:36s} n={int(sel.sum()):4d} recall {a:.2f}")
|
| 98 |
+
torch.save(dict(state=m.state_dict(), mu=mu, sd=sd, names=names), HERE / "concept_head.pt")
|
| 99 |
+
print("-> concept_head.pt")
|
harness/label_shards.py
CHANGED
|
@@ -49,7 +49,8 @@ def label_tag(tag):
|
|
| 49 |
sh = np.load(fp)
|
| 50 |
images, samples, masks = sh["images"], sh["samples"], sh["masks"]
|
| 51 |
months = [int(str(d)[5:7]) for d in sh["dates"]]
|
| 52 |
-
|
|
|
|
| 53 |
names = [c[0] for c in cons]
|
| 54 |
sample_labels = [] # (sample_idx, concept_idx, score, iou)
|
| 55 |
clouds = np.zeros((len(images), 256, 256), np.uint8)
|
|
@@ -62,7 +63,7 @@ def label_tag(tag):
|
|
| 62 |
# one processor per threshold value used in this domain
|
| 63 |
states = {}
|
| 64 |
for ci, (name, vis, thr) in enumerate(cons):
|
| 65 |
-
if name.endswith("/snow cover") and not snow_possible(LAT[
|
| 66 |
continue
|
| 67 |
proc = states.get(thr)
|
| 68 |
if proc is None:
|
|
|
|
| 49 |
sh = np.load(fp)
|
| 50 |
images, samples, masks = sh["images"], sh["samples"], sh["masks"]
|
| 51 |
months = [int(str(d)[5:7]) for d in sh["dates"]]
|
| 52 |
+
base = tag[:-3] if tag.endswith("_ev") else tag # event shards share the spot
|
| 53 |
+
cons = concepts_for(MAN[base])
|
| 54 |
names = [c[0] for c in cons]
|
| 55 |
sample_labels = [] # (sample_idx, concept_idx, score, iou)
|
| 56 |
clouds = np.zeros((len(images), 256, 256), np.uint8)
|
|
|
|
| 63 |
# one processor per threshold value used in this domain
|
| 64 |
states = {}
|
| 65 |
for ci, (name, vis, thr) in enumerate(cons):
|
| 66 |
+
if name.endswith("/snow cover") and not snow_possible(LAT[base], months[si]):
|
| 67 |
continue
|
| 68 |
proc = states.get(thr)
|
| 69 |
if proc is None:
|