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results/cellpaint_posh_extended.json
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| 1 |
+
{
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| 2 |
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"downsampling": {
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| 3 |
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"1": {
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| 4 |
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"m": 1,
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| 5 |
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| 6 |
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| 7 |
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| 8 |
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| 9 |
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| 10 |
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| 11 |
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| 12 |
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| 13 |
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"absolute_gap": -0.020835386835386882
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| 14 |
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},
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| 15 |
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"2": {
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| 16 |
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| 18 |
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| 27 |
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"4": {
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| 28 |
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| 29 |
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| 30 |
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| 31 |
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| 32 |
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| 39 |
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"6": {
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| 40 |
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| 41 |
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| 42 |
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| 43 |
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| 45 |
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| 46 |
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| 47 |
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| 48 |
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| 49 |
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| 50 |
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},
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| 51 |
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"8": {
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| 52 |
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"m": 8,
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| 53 |
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| 54 |
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| 62 |
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},
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"10": {
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| 64 |
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"m": 10,
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| 65 |
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| 66 |
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| 67 |
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| 71 |
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| 74 |
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}
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| 75 |
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},
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"bootstrap": {
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| 77 |
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| 78 |
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| 82 |
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| 84 |
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| 85 |
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| 86 |
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|
| 87 |
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|
| 88 |
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},
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| 89 |
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"knn1": {
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| 90 |
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| 91 |
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| 92 |
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| 93 |
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| 94 |
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| 95 |
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| 96 |
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| 97 |
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| 98 |
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| 99 |
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| 100 |
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},
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| 101 |
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"knn5": {
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| 102 |
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| 103 |
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| 104 |
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| 106 |
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| 108 |
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| 109 |
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| 110 |
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| 111 |
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| 112 |
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}
|
| 113 |
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},
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| 114 |
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| 115 |
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| 122 |
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},
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| 124 |
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| 125 |
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| 126 |
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| 127 |
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"note": "1 plate, 3 wells; all genes pooled in all wells"
|
| 128 |
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},
|
| 129 |
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"cell_count_balanced_knn1": {
|
| 130 |
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"gene_disjoint_f1": 0.38434241835480754,
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| 131 |
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| 133 |
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"leaky_f1_std": 0.045124628336441576
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| 134 |
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},
|
| 135 |
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"metadata_summary": {
|
| 136 |
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"n_plates": 1,
|
| 137 |
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"n_wells": 3,
|
| 138 |
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"wells": [
|
| 139 |
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"EL37_B03",
|
| 140 |
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"EL37_B04",
|
| 141 |
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"EL37_C03"
|
| 142 |
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],
|
| 143 |
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"genes_per_well": 126
|
| 144 |
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}
|
| 145 |
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},
|
| 146 |
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"per_pathway": {
|
| 147 |
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"classes": [
|
| 148 |
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"actin / kinesin",
|
| 149 |
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"golgi-ER retrograde",
|
| 150 |
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"microtubule / dynein",
|
| 151 |
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"mitochondrial translation",
|
| 152 |
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"proteasome",
|
| 153 |
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"unfolded protein response"
|
| 154 |
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],
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| 155 |
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"per_class": {
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| 156 |
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| 161 |
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},
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| 162 |
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},
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"microtubule / dynein": {
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| 173 |
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},
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| 174 |
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"mitochondrial translation": {
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| 176 |
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| 178 |
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| 179 |
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},
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"proteasome": {
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| 182 |
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| 185 |
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},
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| 186 |
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"unfolded protein response": {
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| 187 |
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"n_genes": 9,
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| 188 |
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| 190 |
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"leaky_f1": 0.4
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| 191 |
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}
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| 192 |
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},
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| 193 |
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"confusion_matrix_gd": [
|
| 194 |
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[
|
| 195 |
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| 196 |
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| 197 |
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