--- language: - en license: other # Using 'other' for CC BY-NC-ND (Non-Commercial, No Derivs) tags: - medical - ophthalmology - fundus-image - oct-volume - multi-modal # Key feature: combining 2D fundus and 3D OCT - image-classification - image-segmentation - glaucoma-grading - optic-disc-segmentation task_categories: - image-classification - image-segmentation - object-detection # Includes Fovea Localization (coordinates) task_ids: - multi-class-image-classification # Glaucoma Grading (Normal/Early/Progressive) - semantic-segmentation # OD/OC Segmentation pretty_name: GAMMA (Glaucoma grading from Multi-Modality imAges) Challenge Dataset size_categories: - 100 Merged Dataset Samples

Image: Dataset Samples.

## Short description GAMMA is the first **public multi-modality glaucoma grading** dataset that pairs **2D color fundus photographs** with **3D OCT volumes** for each sample. It was released as part of the GAMMA challenge (OMIA8 / MICCAI 2021) to encourage algorithms that combine fundus and OCT information for automatic glaucoma grading. --- ## What the dataset contains - **Paired modalities:** one macula/optic-disc centered 2D color fundus image **and** one 3D OCT volume (macula-centered) per sample. - **Samples:** **300 paired samples** (fundus + OCT) corresponding to **276 patients**. - **Labeling / ground truth:** each sample has a glaucoma grade (normal / early / progressive), derived from visual field mean deviation (MD) criteria; auxiliary labels include **optic disc & cup (OD/OC) segmentation masks** and **fovea coordinates** on the fundus images. - **Demographics:** 276 Chinese patients, age range 19–77, mean ≈ 40.6 years; female ≈ 42%. - **Balanced classes:** glaucoma ~50% of samples; within glaucoma: ~52% early, ~29% intermediate, ~19% advanced (intermediate+advanced grouped as “progressive” in challenge tasks). - **Acquisition devices:** OCT volumes acquired using **Topcon DRI OCT Triton**; fundus images captured by **KOWA** and **Topcon TRC-NW400** cameras (macula or midpoint between disc and macula). - **OCT spec:** 3×3 mm en-face FOV; each volume contains 256 B-scans (cross-sectional frames). - **Image quality:** manually checked; dataset split into three challenge sets (training, preliminary, final) with ~100 pairs per set. - **License / access:** publicly available via the GAMMA grand-challenge page; dataset distributed under **CC BY-NC-ND** (Attribution-NonCommercial-NoDerivs). - **Official dataset page / access:** https://gamma.grand-challenge.org/ --- ## Intended tasks Primary: - **Glaucoma grading** from paired fundus + OCT (predict: normal / early-glaucoma / progressive-glaucoma). Auxiliary: - **OD/OC segmentation** (optic disc and optic cup masks on fundus images). - **Fovea localization** (x,y coordinates). Researchers may optionally use the auxiliary tasks to boost the main grading performance. --- ## Dataset structure (typical) ```text GAMMA/ ├── images/ │ ├── fundus/ # fundus images (JPEG/PNG) │ │ ├── sample_0001_fundus.jpg │ │ └── ... │ └── oct/ # OCT volumes (folder or volume files per sample) │ ├── sample_0001_oct/ # 256 B-scans or a volume file (format described in README_original) │ └── ... ├── labels/ │ ├── grades.csv # sample_id, grade (normal/early/progressive), MD values, other clinical metadata │ ├── fovea_coords.csv # sample_id, x, y │ └── od_oc_masks/ # per-sample masks (optional; may be in separate archive) │ ├── sample_0001_od.png │ └── ... └── README_original.txt ``` --- ## How samples were graded Glaucoma grading ground truth was determined using **visual field mean deviation (MD)** thresholds from visual field tests performed the same day as OCT: - **Early:** MD > −6 dB - **Intermediate:** −12 dB < MD ≤ −6 dB - **Advanced:** MD ≤ −12 dB For the main challenge, intermediate + advanced were grouped as **progressive-glaucoma**. --- ## Size & splits - **Total paired samples:** **300** (fundus + OCT) - **Patients:** 276 (some bilateral samples) - **Class distribution:** ~50% glaucoma / 50% non-glaucoma; within glaucoma: early ≈ 52%, intermediate ≈ 28.7%, advanced ≈ 19.3% - **Challenge splits:** approximately **100 pairs** for training, 100 for preliminary, 100 for final test (samples from each category distributed across splits). --- ## Recommended uses & notes - Use paired modalities (fundus + OCT) for multimodal fusion models — combining morphological cues (fundus OD/OC, vCDR) and structural OCT features (RNFL thickness) improves grading. - Auxiliary tasks (OD/OC masks, fovea) are provided to support explainability and localized feature extraction. - Respect the **CC BY-NC-ND** license for redistribution and commercial restrictions. --- ## Citation / sources Please cite the GAMMA challenge paper and dataset when using the data: - Wu J., Fang H., Li F., Fu H., Lin F., et al., **“GAMMA challenge: Glaucoma grAding from Multi-Modality imAges.”** (paper / challenge summary). arXiv:2202.06511; journal: *Medical Image Analysis* (2023). DOI: 10.1016/j.media.2023.102938. - Official dataset page (host & download): **https://gamma.grand-challenge.org/** Primary references used to prepare this README: - arXiv / GAMMA challenge paper: https://arxiv.org/abs/2202.06511 - Final journal version / PubMed entry: https://pubmed.ncbi.nlm.nih.gov/37806020/ - GAMMA challenge (Grand Challenge) dataset page: https://gamma.grand-challenge.org/ ---