Add example nii.gz images and dataset.json for Dataset005 and Dataset007
Browse files- Dataset005_MU_Glioma_Post/dataset.json +30 -0
- Dataset005_MU_Glioma_Post/imagesTr/Pat0003_TP1_0000.nii.gz +3 -0
- Dataset005_MU_Glioma_Post/imagesTr/Pat0003_TP1_0001.nii.gz +3 -0
- Dataset005_MU_Glioma_Post/imagesTr/Pat0003_TP1_0002.nii.gz +3 -0
- Dataset005_MU_Glioma_Post/imagesTr/Pat0003_TP1_0003.nii.gz +3 -0
- Dataset007_PICAI/dataset.json +28 -0
- Dataset007_PICAI/imagesTr/10000_1000000_0000.nii.gz +3 -0
- Dataset007_PICAI/imagesTr/10000_1000000_0001.nii.gz +3 -0
- Dataset007_PICAI/imagesTr/10000_1000000_0002.nii.gz +3 -0
Dataset005_MU_Glioma_Post/dataset.json
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{
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"channel_names": {
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"0": "t1c",
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"1": "t1n",
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"2": "t2f",
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"3": "t2w"
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},
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"labels": {
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"background": 0,
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"NCR": 1,
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"ED": 2,
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"ET": 3,
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"NET_RC": 4
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},
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"classification_labels": {
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"primary_diagnosis": {
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"0": "GBM",
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"1": "Astrocytoma",
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"2": "Others"
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}
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},
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"numTraining": 591,
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"file_ending": ".nii.gz",
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"overwrite_image_reader_writer": "SimpleITKIO",
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"license": "CC-BY-NC 4.0",
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"description": "MU-Glioma-Post — post-treatment glioma multi-sequence MRI (t1c, t1n, t2f, t2w) with tumor segmentation and primary diagnosis classification (591 timepoints from 203 patients)",
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"reference": "Mahmoud E, Gass J, Dhemesh Y, Greaser J, Pogorzelski K, Isufi E, Garrett F, Thacker J, Tahon NH, Sinclair J, Layfield L. MU-Glioma Post: A comprehensive dataset of automated MR multi-sequence segmentation and clinical features. Scientific data. 2025 Nov 20;12(1):1847.",
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"name": "Dataset005_MU_Glioma_Post",
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"release": "1.0"
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}
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Dataset005_MU_Glioma_Post/imagesTr/Pat0003_TP1_0000.nii.gz
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version https://git-lfs.github.com/spec/v1
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oid sha256:d9e4522832cfbe0ef84e314232586f6e1b87d9e81fe28a3aef011b53fc9f057c
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size 5251963
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Dataset005_MU_Glioma_Post/imagesTr/Pat0003_TP1_0001.nii.gz
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version https://git-lfs.github.com/spec/v1
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oid sha256:97a69d2a994bb4a53376dcb8690ba8a53b512e6187d5c6c27c5c7dd39e4971e4
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size 5311862
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Dataset005_MU_Glioma_Post/imagesTr/Pat0003_TP1_0002.nii.gz
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version https://git-lfs.github.com/spec/v1
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oid sha256:1f1f6a53ff3ea73821f2de9087aea55c5121573e19e7ee22cea917f97ac01b6f
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size 5354907
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Dataset005_MU_Glioma_Post/imagesTr/Pat0003_TP1_0003.nii.gz
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version https://git-lfs.github.com/spec/v1
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oid sha256:7a69ca2bbe7ae46caf68b1899c2748098c02189eda6315938cfa19c0673c18a4
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size 5449297
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Dataset007_PICAI/dataset.json
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{
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"channel_names": {
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"0": "T2W",
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"1": "ADC",
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"2": "HBV"
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},
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"labels": {
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"background": 0,
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"csPCa": 1
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},
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"classification_labels": {
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"ISUP_grade": {
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"0": "Benign/Indolent",
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"1": "ISUP 1",
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"2": "ISUP 2",
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"3": "ISUP 3",
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"4": "ISUP 4",
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"5": "ISUP 5"
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}
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},
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"numTraining": 1500,
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"file_ending": ".nii.gz",
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"description": "PI-CAI \u2014 prostate MRI (T2W, ADC, HBV) with csPCa binary segmentation and ISUP grade classification (1500 cases from 1476 patients across 11 sites)",
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"reference": "Saha A, Bosma JS, Twilt JJ, et al. Artificial intelligence and radiologists in prostate cancer detection on MRI (PI-CAI): an international, paired, non-inferiority, confirmatory study. Lancet Oncol 2024; 25: 879-887.",
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"license": "CC-BY-NC 4.0",
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"name": "Dataset007_PICAI",
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"release": "1.0"
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}
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Dataset007_PICAI/imagesTr/10000_1000000_0000.nii.gz
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version https://git-lfs.github.com/spec/v1
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oid sha256:ea8c2d39fa6e7bd75eb5e3a48e0c587012b8bbbb7af547fc971e8cd2ac934770
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size 16189455
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Dataset007_PICAI/imagesTr/10000_1000000_0001.nii.gz
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version https://git-lfs.github.com/spec/v1
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oid sha256:3b5082a2572d3003bf0684a2c3df191501c3cef3b7af0da57455af7a26c51213
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size 17775886
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Dataset007_PICAI/imagesTr/10000_1000000_0002.nii.gz
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version https://git-lfs.github.com/spec/v1
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oid sha256:e93d7381a469af3a9d723011c00204cbeeed53c0de20ab554b7f576371501e09
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size 6959156
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