Dataset and Readme upload.
Browse files- .gitattributes +1 -0
- Data_ReadMe.md +49 -0
- LitMedImage_Test.csv +0 -0
- LitMedImage_Train.csv +3 -0
.gitattributes
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@@ -57,3 +57,4 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
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# Video files - compressed
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*.mp4 filter=lfs diff=lfs merge=lfs -text
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*.webm filter=lfs diff=lfs merge=lfs -text
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# Video files - compressed
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*.mp4 filter=lfs diff=lfs merge=lfs -text
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*.webm filter=lfs diff=lfs merge=lfs -text
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LitMedImage_Train.csv filter=lfs diff=lfs merge=lfs -text
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Data_ReadMe.md
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Dataset Name: LitMedImage – literature-derived Medical vs. Non-Medical Image Dataset
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-------------------
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Description:
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-------------------
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LitMedImage is a curated dataset of biomedical literature figures labeled as MEDICAL or NON-MEDICAL. The dataset is built from images extracted from PubMed Central Open Access (PMC-OA) articles and includes corresponding captions and parsed image metadata. Labels were generated using a large language model (LLM) following strict imaging definitions. This dataset is intended for research in figure classification, document parsing, and biomedical vision-language models.
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Columns:
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PMCID: PubMed Central article identifier (e.g., PMC1234567)
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Image_num: Index of the image within the article
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Online_file_path: Direct file path to the image under https://ftp.ncbi.nlm.nih.gov/pub/pmc/
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Image_info_Cleaned: Parsed metadata describing the image contents
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Caption_Clean: Cleaned image caption from the original publication
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label: Binary classification label ("yes" for MEDICAL images, "no" for NON-MEDICAL images)
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-------------------
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Label Definitions:
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-------------------
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Label = "yes" (MEDICAL)
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Images that belong to clinical or biomedical imaging modalities, including:
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Radiology, Echocardiography, Dermoscopy, Histopathology, X-ray (Radiography), CT, MRI, Ultrasound, Nuclear Medicine (PET, SPECT, PET-CT, PET-MRI), Optical Imaging, Thermography, Elastography, Mammography, Digital Breast Tomosynthesis, Fluoroscopy, Clinical Imaging
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Label = "no" (NON-MEDICAL)
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Images that are statistical plots or schematic illustrations, including:
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Bar charts, Histograms, Line graphs, Scatter or Bubble plots, Pie or Donut charts, Area charts, Heatmaps, Box or Violin plots, Radar or Spider charts, Treemaps, Network graphs, Drawings, Conceptual diagrams
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-------------------
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Task Instruction:
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-------------------
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Given an image, classify whether it is a MEDICAL image or a NON-MEDICAL image.
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Data Source:
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All images originate from the PubMed Central Open Access Subset via the public FTP archive at:
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https://ftp.ncbi.nlm.nih.gov/pub/pmc/
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Intended Use:
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- Binary image classification (medical vs. non-medical)
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- Multimodal image + caption classification
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- Figure filtering for automated document processing
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- Pre-filtering figures for vision-language model training or inference
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Citation:
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[To be added]
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LitMedImage_Test.csv
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The diff for this file is too large to render.
See raw diff
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LitMedImage_Train.csv
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version https://git-lfs.github.com/spec/v1
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oid sha256:b0340448c8affaef63e21738ba163588d0f76e4ddc005dcfffbc029e326578c8
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size 253738617
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