Iluthra commited on
Commit
0ff76ac
·
verified ·
1 Parent(s): 134882f

Update evaluator_data/test_evaluator_request.json

Browse files
evaluator_data/test_evaluator_request.json CHANGED
@@ -1,5 +1,5 @@
1
  {
2
- "readout": "interaction_matrix",
3
  "prediction_tasks": [
4
  {
5
  "name": "K562_linear",
@@ -7,41 +7,6 @@
7
  "cell_type": "K562",
8
  "species": "homo_sapiens",
9
  "scale": "linear"
10
- },
11
- {
12
- "name": "K562_log",
13
- "type": "expression",
14
- "cell_type": "K562",
15
- "species": "homo_sapiens",
16
- "scale": "log"
17
- },
18
- {
19
- "name": "hepg2_linear",
20
- "type": "expression",
21
- "cell_type": "hepg2",
22
- "species": "mus_musculus",
23
- "scale": "linear"
24
- },
25
- {
26
- "name": "matcher_test",
27
- "type": "expression",
28
- "cell_type": "HeLa",
29
- "species": "homo_sapiens",
30
- "scale": "linear"
31
- },
32
- {
33
- "name": "task2",
34
- "type": "expression",
35
- "cell_type": "ww6",
36
- "species": "mus_musculus",
37
- "scale": "linear"
38
- },
39
- {
40
- "name": "task3",
41
- "type": "accessibility",
42
- "cell_type": "liver",
43
- "species": "mus_musculus",
44
- "scale": "log"
45
  }
46
  ],
47
  "upstream_seq": "ATGCATGC",
@@ -54,14 +19,5 @@
54
  "range_at_end": "ATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAA",
55
  "full_range": "ATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAA",
56
  "empty_range": "ATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAA"
57
- },
58
- "prediction_ranges": {
59
- "short_seq": [0, 2],
60
- "boundary_1000": [100, 900],
61
- "long_seq": [300, 2999],
62
- "range_at_start": [0, 10],
63
- "range_at_end": [89, 99],
64
- "full_range": [0, 99],
65
- "empty_range": []
66
  }
67
  }
 
1
  {
2
+ "readout": "point",
3
  "prediction_tasks": [
4
  {
5
  "name": "K562_linear",
 
7
  "cell_type": "K562",
8
  "species": "homo_sapiens",
9
  "scale": "linear"
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
10
  }
11
  ],
12
  "upstream_seq": "ATGCATGC",
 
19
  "range_at_end": "ATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAA",
20
  "full_range": "ATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAA",
21
  "empty_range": "ATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAA"
 
 
 
 
 
 
 
 
 
22
  }
23
  }