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evaluator_data/test_evaluator_request.json

@@ -0,0 +1,67 @@
+{
+    "readout": "interaction_matrix",
+    "prediction_tasks": [
+        {
+            "name": "K562_linear",
+            "type": "expression",
+            "cell_type": "K562",
+            "species": "homo_sapiens",
+            "scale": "linear"
+        },
+        {
+            "name": "K562_log",
+            "type": "expression",
+            "cell_type": "K562",
+            "species": "homo_sapiens",
+            "scale": "log"
+        },
+        {
+            "name": "hepg2_linear",
+            "type": "expression",
+            "cell_type": "hepg2",
+            "species": "mus_musculus",
+            "scale": "linear"
+        },
+        {
+            "name": "matcher_test",
+            "type": "expression",
+            "cell_type": "HeLa",
+            "species": "homo_sapiens",
+            "scale": "linear"
+        },
+        {
+            "name": "task2",
+            "type": "expression",
+            "cell_type": "ww6",
+            "species": "mus_musculus",
+            "scale": "linear"
+        },
+        {
+            "name": "task3",
+            "type": "accessibility",
+            "cell_type": "liver",
+            "species": "mus_musculus",
+            "scale": "log"
+        }
+    ],
+    "upstream_seq": "ATGCATGC",
+    "downstream_seq": "GCTAGCTA",
+    "sequences": {
+        "short_seq":     "ATCGATCGATGCTAC",
+        "boundary_1000": "ATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAA",
+        "long_seq":      "AACCACTGTGTACTCGTTATAACATCTGGCAGTTAAAGTCGGGAGAATAGGAGCCGCAATACACAGTTTACCGCATCTAGACCTAACTGAGATACTGCCATAGACGACTAGCCATCCCTCTGGCTCTTAGATAGCCCGATACAGTGATTTTGAAAGGTTTGCGGGGCACAGCTATGACTTGCTTAGCTACGTGTGAGGGAAGGAACTTTTGCGTATTTGTATGTTCACCCGTCTACTACGCATGCGGGCAGATTATGTAGGTTGAGAGATGCGGGAGAAGTTCTCGACCTTCCCGTGGGACGTGAACCTATCCCCTAATAGAGCATTCCGTTCGAGCATGGCAGTAAGTACGCCTTCTCAATTGTGCTAACCTTCATCCCTATCAAAGCTTGGAGCCAATGATCAGGGTTATTCCCTTGGGACAGACTTCCTACTCACAGTCGGTCACATTGGGCTACTCCATGGGTCTTCAGCTTGACCCGGTCTGTTGGGCCGCGATTACGTGAGTTAGGGCCCCGGACTGCGCTGTATAGTCGATTCTCATCCGGCCCCCACATCTGGAAACCCCAACTTATTTAGATAACATGATTAGCCGAAGTTGCACGGCGTGTCCACCGTGGAGTCCTCCCCGGGTGTCCCTCCTTCATTTGACGATAAGCAGCGGCTACCACCATTGATTAACACAAGGAACGGTGATGTTAACATAGATTCGGCACATTACTCTTGTAGGTGTGGAATCACTTAGCTACGCGGCGAAGCCTTATGGCAAAACCGATGGGCAATGATTCGGGTAGCGCTAAAAGTCCATAGCACGTGCATCCCAACGTGGCGTGCGTACAGCTTGACCACCGCTTCACGCTAAGGTGCTGGCCACATGCTAAATTGATGCGCCTGCACTGCTCAAAGGATAATTACGAAGCGGGCGGCCTGGCGGGAGCACTACCCCATCGACGCGTACTCGAATACTGTTTATTGCTCACACATGAACAAATTAGTAGAGTGCCACTTTCAGCCCTCTTGTCGTCGGCGATGTGTGTAAAATGGCGTTGATGTGGATCGACTCTATAAAGGTATCTACTGATGCGTAGGGAGATCCGGAATCTATTGGCCTATGTCACTGAAACTATCCAAACACCCCATGTCGATACTGAACGTATCGACGCATACCTCCTTCCTTGAAAACGCACAATCATACAACTGGGCACATAATGCGTACGCCCATCTAGTACACCCATCTCTGTGGGTCCAGTTCAAGAGCTGGAAGAGCACCCTCCACAAGGTCAAGTGGTATCCTGGTAAGGTAAGCTCGTACCGTGATTCATGCGACAGGGGTAAGACCATCAGTAGTAGGGATAGTGCCAAACCTCACTCACCACTGCCAATAAGGGGTCCTTACCTGAAGAATAAGTGTCAGCCAGTGTAACCCGATGAGGAACCCAAAAGGCGAACCGGGCCAGACAACCCGGCGGTATCGCACTCAAAGCCGGGACACGACGCGTCACAGCCGGTAAGAGTAACCCCGGAGTGAAGACCTATGGGGCTGGATAAAACTGCCGTGGTAACCGCCTTCAACAACCCGAATACGTGGCACTTCAGGAGGCGCCCGGAGGGGGGATGTTTTCTACTATTCGAGGCCGTTCGTTATAACTAGTTGCGTTCCTAGCCGCTATAATTGTCTCTTTGCCGACTAATGAGAACAACCACACCATAGCGATTTGACGCGGCGCCTCGGAATACCGTTTCAGCAGGCGCTTGGTAAGGCCATCGCGAATACCAGGTATCGTGTAAGTAGCGTAGGCCCGCACGCAAGATAAACTGCTAGGGAACCGCGTTTCCACGACCGGTGCACGATTTAATTTCGCCGACGTGATGACATTCCAGGCAGTGCCTCTGCCGCCGGACCCCTCTCGTGATTGGGTAGCTGGACATGCCCTTGTAAGATATAACAAGAGCCTGCCTGTCTAATGATCTCACGGCGAAAGTCGGGGAGACAGCAGCGGCTGCAGACATTATACCGCAACAACACTAAGGTGAGATAACTCCGTAATTGACTACGCGTTCCTCTAGACCTTACTTGACCGGATACAGTGTCTTTGACACGTTTATGGGTTACAGCAATCACATCCAAGACTGGCTATGCACGAAGCAACTCTTGAGTGTTAAAATGTTGACCCCTGTATTTGGGATGCGGGTAGTAGATGAGTGCAGGGACTCCGAGGTCAAGTACATTACCCTCTCATAGGGGGCGTTCTAGATCACGTTACCACCATATCATTCGAGCATGACACCATCTCCGCTGTGCCCATCCTAGTAGTCATTATTCCTATCACGCTTTCGAGTGTCTGGTGGCGGATATCCCCCACGAATGAAAATGTTTTTCGCTGACAGTCATATTGGGGTGCTCCTAAGCTTTTCCACTTGGCTGGGTCAGCTAGGCCTCCGTGCCCGGAGTTTCGGCGCAGTGCTGCCGACAGCCGGCCATTGTCTTTGGGGCCTCATTCGAGGGTACCCGGACCTATCTTGTCGGGACCACCCGGGGTAGTCGTTGGGCTTATGCACCGAAAAGCCCTGCGCCGGCCTCCCCGCTACGGAAGGTGATAAGCTCCGGCAAGCAATTATGAACAACGCAAGGATCGCGGATATAAACAGAGAAACGGCTGATTACACCTGTTCGTGTGGTATCGGTAAATAGCCTCGCGGAGCCTTATGCCATACTCGTCCGCGGAGCACTCTGGTAATGCATATGGTCCACAGGACATTCGTCGCTTCCGGGTATGCGCTCTATTTGACGGTCCTTTGGCGCACAGATGCTGGCCACCATTTAAATTAGAGCGACTCCACATCTGTAAGGTCCGCCACGCAGACGACAGCCCAGGGAGACCACTGACCGATCTACCTGAACGGCAACCTTCTGTATCGTACTGGGGCGGAGAGATAACTACAGTGCCGCTTACAGCCCCTCTGTCGTCGCCGACGTCTGTAGTCTAGCCTCATTATGAT",
+        "range_at_start": "ATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAA",
+        "range_at_end":   "ATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAA",
+        "full_range":     "ATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAA",
+        "empty_range":    "ATGCATGATGCTACGTACGATCGTAGCTGCATGCTAGCGATCGTAGCTAGCTGACTGATCGTAGGGTACGACTGTAGCTCAGTCGATCTGAAAAAAAAAA"
+    },
+    "prediction_ranges": {
+        "short_seq":      [0, 2],
+        "boundary_1000":  [100, 900],
+        "long_seq":       [300, 2999],
+        "range_at_start": [0, 10],
+        "range_at_end":   [89, 99],
+        "full_range":     [0, 99],
+        "empty_range":    []
+    }
+}