deinal commited on
Commit
2df1c4d
·
verified ·
1 Parent(s): ee209ba

Update README.md

Browse files
Files changed (1) hide show
  1. README.md +40 -1
README.md CHANGED
@@ -6,4 +6,43 @@ tags:
6
  - physics
7
  size_categories:
8
  - 1K<n<10K
9
- ---
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
6
  - physics
7
  size_categories:
8
  - 1K<n<10K
9
+ ---
10
+
11
+ # Small Vlasiator Dataset for Machine Learning Studies
12
+
13
+ The data is stored in [Zarr](https://zarr.dev).
14
+
15
+ It can be downloaded to a local `data_small` directory with:
16
+ ```
17
+ from huggingface_hub import snapshot_download
18
+
19
+ snapshot_download(
20
+ repo_id="deinal/spacecast-data",
21
+ repo_type="dataset",
22
+ local_dir="data_small"
23
+ )
24
+ ```
25
+
26
+ This will yield a local `data_small` folder that can be used with [spacecast](https://github.com/fmihpc/spacecast):
27
+ ```
28
+ data_small/
29
+ ├── graph/ - Directory containing graphs for training
30
+ ├── run.zarr/ - Vlasiator run with ρ = 1.0 cm⁻³ solar wind
31
+ ├── static.zarr/ - Static features x, z, r coordinates
32
+ ├── vlasiator_run.zarr - Preprocessed Vlasiator run
33
+ ├── vlasiator_config.yaml - Configuration file for neural-lam
34
+ └── vlasiator_run.yaml - Configuration file for the datastore, referred to from vlasiator_config.yaml
35
+ ```
36
+
37
+ The run was preprocessed with [mllam-data-prep](https://github.com/mllam/mllam-data-prep):
38
+ ```
39
+ mllam_data_prep data_small/vlasiator_run.yaml
40
+ ```
41
+ This produces training-ready Zarr stores in the `data_small` directory.
42
+
43
+ Simple, multiscale, and hierarchical graphs are included already, but can be created using the following commands:
44
+ ```
45
+ python -m neural_lam.create_graph --config_path data_small/vlasiator_config.yaml --name simple --levels 1 --coarsen-factor 5 --plot
46
+ python -m neural_lam.create_graph --config_path data_small/vlasiator_config.yaml --name multiscale --levels 3 --coarsen-factor 5 --plot
47
+ python -m neural_lam.create_graph --config_path data_small/vlasiator_config.yaml --name hierarchical --levels 3 --coarsen-factor 5 --hierarchical --plot
48
+ ```