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- ---
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- license: cc-by-4.0
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- ---
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ ---
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+ license: cc-by-4.0
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+ task_categories:
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+ - image-classification
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+ tags:
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+ - pathology
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+ - histopathology
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+ - prostate-cancer
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+ - gleason-grading
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+ - foundation-models
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+ - benchmark
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+ size_categories:
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+ - 1K<n<10K
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+ ---
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+
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+ # PANDA-PLUS-Bench
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+
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+ A benchmark dataset for evaluating WSI-specific feature collapse in pathology foundation models.
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+
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+ ## Dataset Description
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+
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+ PANDA-PLUS-Bench contains expert-annotated prostate biopsy patches from 9 whole slide images (9 unique patients) with pixel-level Gleason pattern annotations.
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+
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+ ### Dataset Summary
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+
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+ - **Patches**: ~2,770 per augmentation condition
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+ - **Resolution**: 224×224 pixels at 20× magnification
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+ - **Classes**: Benign (0), GP3 (1), GP4 (2), GP5 (3)
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+ - **Slides**: 9 (one per patient)
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+ - **Augmentations**: 8 conditions
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+
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+ ### Augmentation Conditions
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+
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+ | Split | Description |
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+ |-------|-------------|
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+ | baseline | ImageNet normalization only |
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+ | color_jitter | Brightness, contrast, saturation, hue |
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+ | grayscale | Complete color removal |
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+ | gaussian_noise | Additive noise (σ=0.05) |
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+ | heavy_geometric | Rotation ±180°, flips |
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+ | combined_aggressive | All augmentations combined |
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+ | macenko_normalization | Stain normalization |
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+ | hed_stain_augmentation | H/E channel perturbation |
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+
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+ ## Usage
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+ ```python
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+ from datasets import load_dataset
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+
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+ # Load baseline patches
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+ dataset = load_dataset("dellacortelab/PANDA-PLUS-Bench", split="baseline")
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+
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+ # Access a sample
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+ sample = dataset[0]
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+ image = sample['image'] # PIL Image
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+ label = sample['label'] # 0-3
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+ slide_id = sample['slide_id'] # Slide identifier
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+ ```
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+
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+ ## Evaluation
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+
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+ See our [Colab notebook](https://colab.research.google.com/github/dellacortelab/PANDA-PLUS-Bench/blob/main/PANDA_PLUS_Bench_Evaluation.ipynb) for standardized evaluation.
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+
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+ ## Citation
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+ ```bibtex
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+ @article{ebbert2025pandaplusbench,
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+ title={PANDA-PLUS-Bench: A Benchmark for Evaluating WSI-Specific Feature Collapse},
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+ author={Ebbert, Joshua and Della Corte, Dennis},
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+ year={2025}
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+ }
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+ ```
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+
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+ ## License
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+
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+ CC-BY-4.0