dimostzim commited on
Commit
d030a5a
·
0 Parent(s):

Initial siRBench dataset splits

Browse files
Files changed (5) hide show
  1. .gitignore +2 -0
  2. README.md +32 -0
  3. siRBench_leftout.csv +0 -0
  4. siRBench_test.csv +0 -0
  5. siRBench_train.csv +0 -0
.gitignore ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ .DS_Store
2
+ Thumbs.db
README.md ADDED
@@ -0,0 +1,32 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ---
2
+ configs:
3
+ - config_name: default
4
+ data_files:
5
+ - split: train
6
+ path: siRBench_train.csv
7
+ - split: test
8
+ path: siRBench_test.csv
9
+ - split: leftout
10
+ path: siRBench_leftout.csv
11
+ ---
12
+
13
+ # siRBench data
14
+
15
+ This repository contains the three public siRBench tabular splits used by the
16
+ model and benchmark workflows.
17
+
18
+ Splits:
19
+ - `train`: 2,776 rows
20
+ - `test`: 275 rows
21
+ - `leftout`: 896 rows
22
+
23
+ All three files share the same 106-column schema, including:
24
+ - `siRNA`
25
+ - `mRNA`
26
+ - `extended_mRNA`
27
+ - `efficiency`
28
+ - `source`
29
+ - `cell_line`
30
+ - engineered thermodynamic features
31
+
32
+ `leftout` is a second held-out test set rather than a validation split.
siRBench_leftout.csv ADDED
The diff for this file is too large to render. See raw diff
 
siRBench_test.csv ADDED
The diff for this file is too large to render. See raw diff
 
siRBench_train.csv ADDED
The diff for this file is too large to render. See raw diff