import os import numpy as np import pandas as pd class StandardScaler: """ This scaler code is borrowed from https://github.com/liuxu77/LargeST/blob/main/data/generate_data_for_training.py """ def __init__(self, mean, std): self.mean = mean self.std = std def transform(self, data): return (data - self.mean) / self.std def inverse_transform(self, data): return (data * self.std) + self.mean def generate_data_and_idx(df: pd.DataFrame, x_offsets, y_offsets, add_time_of_day, add_day_of_week): num_samples, num_nodes = df.shape data = np.expand_dims(df.values, axis=-1) feature_list = [data] if add_time_of_day: time_ind = (df.index.values - df.index.values.astype('datetime64[D]')) / np.timedelta64(1, 'D') time_of_day = np.tile(time_ind, [1, num_nodes, 1]).transpose((2, 1, 0)) feature_list.append(time_of_day) if add_day_of_week: dow = df.index.dayofweek dow_tiled = np.tile(dow, [1, num_nodes, 1]).transpose((2, 1, 0)) day_of_week = dow_tiled / 7 feature_list.append(day_of_week) data = np.concatenate(feature_list, axis=-1) min_t = abs(min(x_offsets)) max_t = abs(num_samples - abs(max(y_offsets))) # Exclusive print('idx min & max:', min_t, max_t) idx = np.arange(min_t, max_t, 1) return data, idx def new_and_dying_sensors(df: pd.DataFrame): df = df.sort_index() isna = df.isna() valid = ~isna has_before = valid.cumsum(axis=0).gt(0) has_after = valid[::-1].cumsum(axis=0)[::-1].gt(0) leading_nan = isna & ~has_before trailing_nan = isna & ~has_after internal_nan = isna & has_before & has_after newborn_cols = leading_nan.any(axis=0) dying_cols = trailing_nan.any(axis=0) invalid_cols = internal_nan.any(axis=0) | isna.all(axis=0) newborn_sensors = df.columns[newborn_cols].tolist() dying_sensors = df.columns[dying_cols].tolist() invalid_sensors = df.columns[invalid_cols].tolist() return newborn_sensors, dying_sensors, invalid_sensors def generate_largest_data(df: pd.DataFrame, output_folder: str, sensors: list = None, seq_len_x: int = 12, seq_len_y: int = 12, splits: dict[str, float] = None): if splits is None: splits = {'train': 0.6, 'val': 0.2} x_offsets = np.sort(np.arange(-(seq_len_x - 1), 1, 1)) y_offsets = np.sort(np.arange(1, seq_len_y + 1, 1)) if sensors is not None: df = df[df['sensor_id'].isin(sensors)] df['traffic_intensity'] = df['traffic_intensity'] / 4 # data is a 15-min interval but represented as per hour df_pivot = df.pivot(index='entry_date', columns='sensor_id', values='traffic_intensity') print('original data shape:', df_pivot.shape) newborn, dying, invalid = new_and_dying_sensors(df_pivot) if len(invalid) > 0: raise Exception("invalid sensors (with nans inside) found") to_drop = set(newborn) | set(dying) df_clean = df_pivot.drop(columns=to_drop) data, idx = generate_data_and_idx(df_clean, x_offsets, y_offsets, add_time_of_day=True, add_day_of_week=True) print('final data shape:', data.shape, 'idx shape:', idx.shape) # generate splits num_samples = len(idx) num_train = int(num_samples * splits['train']) num_val = int(num_samples * splits['val']) num_test = num_samples - num_train - num_val idx_train = idx[:num_train] idx_val = idx[num_train:num_train + num_val] idx_test = idx[num_train + num_val:] # normalize data x_train = data[:idx_val[0] - seq_len_x, :, 0] scaler = StandardScaler(mean=x_train.mean(), std=x_train.std()) data[..., 0] = scaler.transform(data[..., 0]) # save data os.makedirs(output_folder, exist_ok=True) np.savez_compressed(os.path.join(output_folder, 'his.npz'), data=data, mean=scaler.mean, std=scaler.std) np.save(os.path.join(output_folder, 'idx_train.npy'), idx_train) np.save(os.path.join(output_folder, 'idx_val.npy'), idx_val) np.save(os.path.join(output_folder, 'idx_test.npy'), idx_test)