"""Model, optimizer, and checkpoint setup for metadata training.""" from __future__ import annotations import argparse from pathlib import Path import torch from milk10k_effb2_metadata.checkpoints import ( infer_checkpoint_backend, load_encoder_checkpoint, resolve_backbone_backends, ) from milk10k_effb2_metadata.models import ( DualEffB2MetadataClassifier, is_one_encoder_image_fusion, model_class_for_backbone, ) def load_model_state_compat(model: DualEffB2MetadataClassifier, state: dict[str, torch.Tensor]) -> None: """Load checkpoints created before LWS added the class_scales parameter.""" incompatible = model.load_state_dict(state, strict=False) missing = set(incompatible.missing_keys) unexpected = set(incompatible.unexpected_keys) allowed_missing = {"class_scales"} if missing - allowed_missing or unexpected: raise RuntimeError( f"Checkpoint state mismatch: missing={sorted(missing)}, unexpected={sorted(unexpected)}" ) if "class_scales" in missing: model.class_scales.data.fill_(1.0) def infer_branch_backend_from_state(state: dict[str, torch.Tensor], branch_prefix: str) -> str: keys = [key.removeprefix(branch_prefix) for key in state if key.startswith(branch_prefix)] timm_prefixes = ("conv_stem.", "bn1.", "blocks.", "conv_head.", "bn2.", "stages.", "stem.") torchvision_prefixes = ("features.", "avgpool.", "classifier.") timm_hits = sum(key.startswith(timm_prefixes) for key in keys) torchvision_hits = sum(key.startswith(torchvision_prefixes) for key in keys) if timm_hits > torchvision_hits: return "timm" if torchvision_hits > timm_hits: return "torchvision" if any(key.startswith("layer") for key in keys): return "timm" raise RuntimeError(f"Cannot infer backend for resume checkpoint branch prefix {branch_prefix!r}.") def resolve_training_backbone_backends(args: argparse.Namespace, device: torch.device) -> tuple[str, str]: image_fusion = getattr(args, "image_fusion", "concat") if is_one_encoder_image_fusion(image_fusion): if args.backbone_backend != "auto": return args.backbone_backend, args.backbone_backend if args.resume_checkpoint is not None: checkpoint = torch.load(args.resume_checkpoint.expanduser().resolve(), map_location=device, weights_only=False) state = checkpoint["model_state"] backend = infer_branch_backend_from_state(state, "shared_encoder.") checkpoint_args = checkpoint.get("args", {}) if checkpoint_args.get("backbone") and args.backbone == "efficientnet_b2": args.backbone = checkpoint_args["backbone"] print(f"Auto-detected resume shared backend: shared={backend}") return backend, backend print("One-encoder image fusion: using timm backbone initialized from ImageNet weights.") return "timm", "timm" if args.backbone_backend != "auto": return args.backbone_backend, args.backbone_backend if args.clinical_checkpoint is not None and args.dermoscopic_checkpoint is not None: return resolve_backbone_backends(args, device) if args.clinical_checkpoint is not None: clinical_backend = infer_checkpoint_backend(args.clinical_checkpoint, device, "clinical") print( "Auto-detected clinical backbone backend: " f"clinical={clinical_backend}, dermoscopic={clinical_backend} (ImageNet initialized)" ) return clinical_backend, clinical_backend if args.dermoscopic_checkpoint is not None: dermoscopic_backend = infer_checkpoint_backend(args.dermoscopic_checkpoint, device, "dermoscopic") print( "Auto-detected dermoscopic backbone backend: " f"clinical={dermoscopic_backend} (ImageNet initialized), dermoscopic={dermoscopic_backend}" ) return dermoscopic_backend, dermoscopic_backend if args.resume_checkpoint is None: print("No branch checkpoints passed; using timm backbones initialized from ImageNet weights.") return "timm", "timm" checkpoint = torch.load(args.resume_checkpoint.expanduser().resolve(), map_location=device, weights_only=False) state = checkpoint["model_state"] clinical_backend = infer_branch_backend_from_state(state, "clinical_encoder.") dermoscopic_backend = infer_branch_backend_from_state(state, "dermoscopic_encoder.") checkpoint_args = checkpoint.get("args", {}) if checkpoint_args.get("backbone") and args.backbone == "efficientnet_b2": args.backbone = checkpoint_args["backbone"] print(f"Auto-detected resume backends: clinical={clinical_backend}, dermoscopic={dermoscopic_backend}") return clinical_backend, dermoscopic_backend def build_optimizer( model: DualEffB2MetadataClassifier, args: argparse.Namespace, encoders_trainable: bool, ) -> torch.optim.Optimizer: head_params = [] encoder_params = [] metadata_params = [] for name, param in model.named_parameters(): if not param.requires_grad: continue if name.startswith(("clinical_encoder.", "dermoscopic_encoder.", "shared_encoder.")): encoder_params.append(param) elif name.startswith( ( "metadata_head.", "clinical_metadata_gate.", "dermoscopic_metadata_gate.", "shared_metadata_gate.", ) ): metadata_params.append(param) else: head_params.append(param) groups = [{"params": head_params, "lr": args.head_lr}] if metadata_params: groups.append({"params": metadata_params, "lr": args.metadata_lr if args.metadata_lr is not None else args.head_lr}) if encoders_trainable and encoder_params: groups.append({"params": encoder_params, "lr": args.encoder_lr}) return torch.optim.AdamW(groups, weight_decay=args.weight_decay) def set_metadata_head_trainable(model: DualEffB2MetadataClassifier, trainable: bool) -> None: for param in model.metadata_head.parameters(): param.requires_grad = trainable for module_name in ("clinical_metadata_gate", "dermoscopic_metadata_gate", "shared_metadata_gate"): module = getattr(model, module_name, None) if module is not None: for param in module.parameters(): param.requires_grad = trainable def load_resume_checkpoint( checkpoint_path: Path | None, model: DualEffB2MetadataClassifier, device: torch.device, ema_model: torch.nn.Module | None = None, ) -> tuple[int, float, str | None]: if checkpoint_path is None: return 1, float("-inf"), None checkpoint_path = checkpoint_path.expanduser().resolve() if not checkpoint_path.exists(): raise FileNotFoundError(f"Resume checkpoint not found: {checkpoint_path}") checkpoint = torch.load(checkpoint_path, map_location=device, weights_only=False) load_model_state_compat(model, checkpoint["model_state"]) if ema_model is not None and "ema_model_state" in checkpoint: ema_model.load_state_dict(checkpoint["ema_model_state"]) next_epoch = int(checkpoint.get("epoch", 0)) + 1 best_val_f1 = float( checkpoint.get( "best_selection_metric", checkpoint.get("best_val_f1_macro", float("-inf")), ) ) phase = checkpoint.get("phase") selection_metric_name = checkpoint.get("selection_metric_name", "f1_macro") print( f"Resumed checkpoint: {checkpoint_path}, phase={phase}, " f"last_epoch={next_epoch - 1}, best_{selection_metric_name}={best_val_f1:.4f}" ) print("Optimizer is re-created from current CLI LR settings.") return next_epoch, best_val_f1, str(phase) if phase is not None else None def build_model( class_names: list[str], metadata_dim: int, args: argparse.Namespace, device: torch.device, clinical_backbone_backend: str, dermoscopic_backbone_backend: str, ) -> DualEffB2MetadataClassifier: model_class = model_class_for_backbone(args.backbone) model = model_class( num_classes=len(class_names), metadata_input_dim=metadata_dim, branch_dim=args.branch_dim, metadata_dim=args.metadata_dim, classifier_hidden_dim=args.classifier_hidden_dim, dropout=args.dropout, imagenet_pretrained=args.imagenet_pretrained, clinical_backbone_backend=clinical_backbone_backend, dermoscopic_backbone_backend=dermoscopic_backbone_backend, backbone=args.backbone, disable_metadata=args.disable_metadata, metadata_fusion=args.metadata_fusion, image_fusion=getattr(args, "image_fusion", "concat"), metadata_gate_hidden_dim=args.metadata_gate_hidden_dim, classifier_style=getattr(args, "classifier_style", "legacy"), logit_fusion_mode=args.logit_fusion_mode, fusion_logit_weight=args.fusion_logit_weight, clinical_logit_weight=args.clinical_logit_weight, dermoscopic_logit_weight=args.dermoscopic_logit_weight, ).to(device) if args.resume_checkpoint is None and not is_one_encoder_image_fusion(getattr(args, "image_fusion", "concat")): if args.clinical_checkpoint is not None: load_encoder_checkpoint(args.clinical_checkpoint, model.clinical_encoder, "clinical", device) if args.dermoscopic_checkpoint is not None: load_encoder_checkpoint(args.dermoscopic_checkpoint, model.dermoscopic_encoder, "dermoscopic", device) if args.disable_metadata or args.freeze_metadata_head: set_metadata_head_trainable(model, False) return model