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singleenc_canvas_meta_clean.predict.log

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+Tail audit DF: predicted_count=3, mean_probability=0.007857, max_probability=0.946680
+Tail audit INF: predicted_count=1, mean_probability=0.004758, max_probability=0.476605
+Saved predictions: /marimo/single_encoder_split_submissions/singleenc_canvas_meta_clean.csv

singleenc_canvas_meta_clean/confusion_analysis.json

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+{
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+      "count": 3,
+      "rate_of_true": 0.3
+    }
+  ]
+}

singleenc_canvas_meta_clean/confusion_matrix.csv

@@ -0,0 +1,12 @@
+,AKIEC,BCC,BEN_OTH,BKL,DF,INF,MAL_OTH,MEL,NV,SCCKA,VASC
+AKIEC,25,14,0,10,0,0,0,0,0,12,0
+BCC,6,467,2,6,0,0,0,5,0,18,0
+BEN_OTH,0,4,1,2,0,0,0,1,1,0,0
+BKL,5,36,0,43,0,2,0,5,6,12,0
+DF,0,3,0,1,4,0,0,1,1,0,0
+INF,0,6,0,0,0,1,0,0,3,0,0
+MAL_OTH,0,2,0,0,0,0,0,0,0,0,0
+MEL,0,8,0,9,0,1,0,45,26,0,1
+NV,0,4,0,13,1,0,0,14,117,0,0
+SCCKA,7,30,0,8,0,0,0,0,0,50,0
+VASC,0,3,0,0,0,0,0,0,2,0,4

singleenc_canvas_meta_clean/confusion_matrix_raw.csv

@@ -0,0 +1,12 @@
+,AKIEC,BCC,BEN_OTH,BKL,DF,INF,MAL_OTH,MEL,NV,SCCKA,VASC
+AKIEC,25,14,0,10,0,0,0,0,0,12,0
+BCC,6,467,2,6,0,0,0,5,0,18,0
+BEN_OTH,0,4,1,2,0,0,0,1,1,0,0
+BKL,5,36,0,43,0,2,0,5,6,12,0
+DF,0,3,0,1,4,0,0,1,1,0,0
+INF,0,6,0,0,0,1,0,0,3,0,0
+MAL_OTH,0,2,0,0,0,0,0,0,0,0,0
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singleenc_canvas_meta_clean/per_class_metrics.csv

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singleenc_canvas_meta_clean/per_class_metrics_raw.csv

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singleenc_canvas_meta_clean/prediction_summary.json

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singleenc_canvas_meta_clean/run_config.json

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+}

singleenc_canvas_meta_clean/run_diagnostics.json

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+      ],
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+      ],
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+          "true": "VASC",
+          "predicted": "BCC",
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+        {
+          "true": "VASC",
+          "predicted": "NV",
+          "count": 2,
+          "rate_of_true": 0.2222222222222222
+        }
+      ]
+    },
+    "false_positives_by_predicted_class": {
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+          "true": "SCCKA",
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+      ],
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+        {
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+        {
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+      ],
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+          "true": "BCC",
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+          "rate_of_predicted": 0.6666666666666666
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+      ],
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+        {
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+        }
+      ],
+      "DF": [
+        {
+          "predicted": "DF",
+          "true": "NV",
+          "count": 1,
+          "rate_of_predicted": 0.2
+        }
+      ],
+      "INF": [
+        {
+          "predicted": "INF",
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+        },
+        {
+          "predicted": "INF",
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+          "count": 1,
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+        }
+      ],
+      "MAL_OTH": [],
+      "MEL": [
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+        }
+      ],
+      "NV": [
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+        {
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+        {
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+        }
+      ],
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+          "rate_of_predicted": 0.1956521739130435
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+        {
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+        {
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+        }
+      ],
+      "VASC": [
+        {
+          "predicted": "VASC",
+          "true": "MEL",
+          "count": 1,
+          "rate_of_predicted": 0.2
+        }
+      ]
+    },
+    "top_confusion_pairs": [
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+        "rate_of_true": 0.3302752293577982
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+      {
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+      },
+      {
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+      },
+      {
+        "true": "AKIEC",
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+      {
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+      },
+      {
+        "true": "NV",
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+        "rate_of_true": 0.087248322147651
+      },
+      {
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+      },
+      {
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+      {
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+        "rate_of_true": 0.07368421052631578
+      },
+      {
+        "true": "BCC",
+        "predicted": "AKIEC",
+        "count": 6,
+        "rate_of_true": 0.011904761904761904
+      },
+      {
+        "true": "BCC",
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+        "rate_of_true": 0.011904761904761904
+      },
+      {
+        "true": "BKL",
+        "predicted": "NV",
+        "count": 6,
+        "rate_of_true": 0.05504587155963303
+      },
+      {
+        "true": "INF",
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+        "rate_of_true": 0.6
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+      {
+        "true": "BCC",
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+      },
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+        "count": 5,
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+      }
+    ],
+    "watched_confusion_patterns": [
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+        "true": "BCC",
+        "predicted": "SCCKA",
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+        "rate_of_true": 0.03571428571428571
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+      {
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+        "rate_of_true": 0.19672131147540983
+      },
+      {
+        "true": "BKL",
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+        "count": 12,
+        "rate_of_true": 0.11009174311926606
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+      {
+        "true": "SCCKA",
+        "predicted": "BKL",
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+        "rate_of_true": 0.08421052631578947
+      },
+      {
+        "true": "SCCKA",
+        "predicted": "AKIEC",
+        "count": 7,
+        "rate_of_true": 0.07368421052631578
+      },
+      {
+        "true": "BCC",
+        "predicted": "AKIEC",
+        "count": 6,
+        "rate_of_true": 0.011904761904761904
+      },
+      {
+        "true": "BCC",
+        "predicted": "BKL",
+        "count": 6,
+        "rate_of_true": 0.011904761904761904
+      },
+      {
+        "true": "INF",
+        "predicted": "BCC",
+        "count": 6,
+        "rate_of_true": 0.6
+      },
+      {
+        "true": "INF",
+        "predicted": "NV",
+        "count": 3,
+        "rate_of_true": 0.3
+      }
+    ]
+  }
+}

singleenc_canvas_meta_clean/run_report.md

@@ -0,0 +1,160 @@
+# MILK10k Run Report
+
+## Config Summary
+
+- fold: None
+- output_dir: /marimo/single_encoder_split_runs/singleenc_canvas_meta_clean
+- backbone: efficientnet_b2
+- metadata_fusion: concat
+- image_fusion: single_encoder_canvas
+- loss: ce
+- class_weight: False
+- weighted_sampler: False
+- balance_mode: none
+- balance_head_ratio: 2.0
+- balance_tail_floor: 100
+- balance_min_source_count: 20
+- augmented_data_dir: None
+- dermoscopic_mask_dir: None
+- min_dermoscopic_mask_ratio: 0.01
+- augmented_classes: []
+- augmented_max_per_class: 0
+- freeze_metadata_head: False
+- zero_augmented_metadata: False
+
+## Final Metrics
+
+- accuracy: 0.7223282442748091
+- balanced_accuracy: 0.41800227494210984
+- dice_macro: 0.45890082971867585
+- f1_macro: 0.45890082971867585
+- roc_auc_macro_ovr: 0.8877698658146211
+- top2_accuracy: 0.8826335877862596
+- top3_accuracy: 0.9427480916030534
+
+## Data Distribution
+
+### Train
+
+- rows: 4192
+- real_rows: 4192
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 242 | 0 |
+| BCC | 2018 | 0 |
+| BEN_OTH | 35 | 0 |
+| BKL | 435 | 0 |
+| DF | 42 | 0 |
+| INF | 40 | 0 |
+| MAL_OTH | 7 | 0 |
+| MEL | 360 | 0 |
+| NV | 597 | 0 |
+| SCCKA | 378 | 0 |
+| VASC | 38 | 0 |
+
+### Validation
+
+- rows: 1048
+- real_rows: 1048
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 61 | 0 |
+| BCC | 504 | 0 |
+| BEN_OTH | 9 | 0 |
+| BKL | 109 | 0 |
+| DF | 10 | 0 |
+| INF | 10 | 0 |
+| MAL_OTH | 2 | 0 |
+| MEL | 90 | 0 |
+| NV | 149 | 0 |
+| SCCKA | 95 | 0 |
+| VASC | 9 | 0 |
+
+## Per-Class Metrics
+
+| class | support | precision | recall_sensitivity | specificity | f1 | auc_ovr | mean_correct_confidence |
+| --- | --- | --- | --- | --- | --- | --- | --- |
+| AKIEC | 61 | 0.581395 | 0.409836 | 0.981763 | 0.480769 | 0.920225 | 0.72496 |
+| BCC | 504 | 0.809359 | 0.926587 | 0.797794 | 0.864015 | 0.934958 | 0.906308 |
+| BEN_OTH | 9 | 0.333333 | 0.111111 | 0.998075 | 0.166667 | 0.906962 | 0.596228 |
+| BKL | 109 | 0.467391 | 0.394495 | 0.947817 | 0.427861 | 0.837442 | 0.779698 |
+| DF | 10 | 0.8 | 0.4 | 0.999037 | 0.533333 | 0.922543 | 0.612932 |
+| INF | 10 | 0.25 | 0.1 | 0.99711 | 0.142857 | 0.944412 | 0.685016 |
+| MAL_OTH | 2 | 0 | 0 | 1 | 0 | 0.497132 |  |
+| MEL | 90 | 0.633803 | 0.5 | 0.97286 | 0.559006 | 0.921213 | 0.7803 |
+| NV | 149 | 0.75 | 0.785235 | 0.956618 | 0.767213 | 0.964211 | 0.911588 |
+| SCCKA | 95 | 0.543478 | 0.526316 | 0.955929 | 0.534759 | 0.931021 | 0.891758 |
+| VASC | 9 | 0.8 | 0.444444 | 0.999038 | 0.571429 | 0.985349 | 0.878434 |
+
+## Weak Classes
+
+| class | support | precision | recall_sensitivity | specificity | f1 | auc_ovr | mean_correct_confidence |
+| --- | --- | --- | --- | --- | --- | --- | --- |
+| MAL_OTH | 2 | 0 | 0 | 1 | 0 | 0.497132 |  |
+| INF | 10 | 0.25 | 0.1 | 0.99711 | 0.142857 | 0.944412 | 0.685016 |
+| BEN_OTH | 9 | 0.333333 | 0.111111 | 0.998075 | 0.166667 | 0.906962 | 0.596228 |
+| BKL | 109 | 0.467391 | 0.394495 | 0.947817 | 0.427861 | 0.837442 | 0.779698 |
+| AKIEC | 61 | 0.581395 | 0.409836 | 0.981763 | 0.480769 | 0.920225 | 0.72496 |
+
+## Prediction Distribution
+
+| class | pred_count | mean_prob |
+|---|---:|---:|
+| AKIEC | 43 | 0.0522 |
+| BCC | 577 | 0.5079 |
+| BEN_OTH | 3 | 0.0060 |
+| BKL | 92 | 0.1065 |
+| DF | 5 | 0.0054 |
+| INF | 4 | 0.0040 |
+| MAL_OTH | 0 | 0.0005 |
+| MEL | 71 | 0.0689 |
+| NV | 156 | 0.1476 |
+| SCCKA | 92 | 0.0955 |
+| VASC | 5 | 0.0055 |
+
+- mean_confidence: 0.8397572636604309
+- median_confidence: 0.931233286857605
+- mean_top1_top2_gap: 0.7270599007606506
+- mean_entropy: 0.4348164200782776
+- low_confidence_rows: 76
+
+## Top Confusion Pairs
+
+| true | predicted | count | rate_of_true |
+|---|---|---:|---:|
+| BKL | BCC | 36 | 0.330 |
+| SCCKA | BCC | 30 | 0.316 |
+| MEL | NV | 26 | 0.289 |
+| BCC | SCCKA | 18 | 0.036 |
+| AKIEC | BCC | 14 | 0.230 |
+| NV | MEL | 14 | 0.094 |
+| NV | BKL | 13 | 0.087 |
+| AKIEC | SCCKA | 12 | 0.197 |
+| BKL | SCCKA | 12 | 0.110 |
+| AKIEC | BKL | 10 | 0.164 |
+| MEL | BKL | 9 | 0.100 |
+| MEL | BCC | 8 | 0.089 |
+
+## Watched Confusion Patterns
+
+| true | predicted | count | rate_of_true |
+|---|---|---:|---:|
+| BCC | SCCKA | 18 | 0.036 |
+| AKIEC | SCCKA | 12 | 0.197 |
+| BKL | SCCKA | 12 | 0.110 |
+| SCCKA | BKL | 8 | 0.084 |
+| SCCKA | AKIEC | 7 | 0.074 |
+| BCC | AKIEC | 6 | 0.012 |
+| BCC | BKL | 6 | 0.012 |
+| INF | BCC | 6 | 0.600 |
+| INF | NV | 3 | 0.300 |
+
+## Warnings
+
+- [medium] tiny_validation_support: MAL_OTH validation support is only 2.

singleenc_canvas_meta_clean/split_summary.md

@@ -0,0 +1,66 @@
+# Split Summary
+
+## Full
+
+- rows: 5240
+- real_rows: 5240
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 303 | 0 |
+| BCC | 2522 | 0 |
+| BEN_OTH | 44 | 0 |
+| BKL | 544 | 0 |
+| DF | 52 | 0 |
+| INF | 50 | 0 |
+| MAL_OTH | 9 | 0 |
+| MEL | 450 | 0 |
+| NV | 746 | 0 |
+| SCCKA | 473 | 0 |
+| VASC | 47 | 0 |
+
+## Train
+
+- rows: 4192
+- real_rows: 4192
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 242 | 0 |
+| BCC | 2018 | 0 |
+| BEN_OTH | 35 | 0 |
+| BKL | 435 | 0 |
+| DF | 42 | 0 |
+| INF | 40 | 0 |
+| MAL_OTH | 7 | 0 |
+| MEL | 360 | 0 |
+| NV | 597 | 0 |
+| SCCKA | 378 | 0 |
+| VASC | 38 | 0 |
+
+## Val
+
+- rows: 1048
+- real_rows: 1048
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 61 | 0 |
+| BCC | 504 | 0 |
+| BEN_OTH | 9 | 0 |
+| BKL | 109 | 0 |
+| DF | 10 | 0 |
+| INF | 10 | 0 |
+| MAL_OTH | 2 | 0 |
+| MEL | 90 | 0 |
+| NV | 149 | 0 |
+| SCCKA | 95 | 0 |
+| VASC | 9 | 0 |
+
+- synthetic_train_only: False

singleenc_canvas_nometa_clean.predict.log

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+
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+Tail audit DF: predicted_count=5, mean_probability=0.010479, max_probability=0.837968
+Tail audit INF: predicted_count=2, mean_probability=0.005812, max_probability=0.402538
+Saved predictions: /marimo/single_encoder_split_submissions/singleenc_canvas_nometa_clean.csv

singleenc_canvas_nometa_clean/confusion_analysis.json

@@ -0,0 +1,809 @@
+{
+  "false_negatives_by_true_class": {
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+        "rate_of_true": 0.21311475409836064
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+        "rate_of_true": 0.16393442622950818
+      }
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+        "rate_of_true": 0.023809523809523808
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+  },
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singleenc_canvas_nometa_clean/confusion_matrix.csv

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singleenc_canvas_nometa_clean/confusion_matrix_raw.csv

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singleenc_canvas_nometa_clean/data_summary.json

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singleenc_canvas_nometa_clean/metrics.json

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singleenc_canvas_nometa_clean/per_class_metrics.csv

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singleenc_canvas_nometa_clean/per_class_metrics_raw.csv

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singleenc_canvas_nometa_clean/prediction_summary.json

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singleenc_canvas_nometa_clean/run_config.json

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+    "imagenet_pretrained": true,
+    "selection_metric": "f1_macro",
+    "calibrate_bias": false,
+    "calibration_metric": "dice_macro",
+    "calibration_max_bias": 1.5,
+    "calibration_step": 0.25,
+    "calibration_passes": 3,
+    "patience": 6,
+    "tau": 0.0,
+    "lws_epochs": 0,
+    "lws_lr": 0.01,
+    "lws_sampler_power": 0.5,
+    "lws_min_scale": 0.75,
+    "lws_max_scale": 1.5,
+    "ema": false,
+    "ema_decay": 0.999,
+    "fit_temperature": false
+  },
+  "environment": {
+    "timestamp_utc": "2026-06-23T00:56:33.305357+00:00",
+    "cwd": "/marimo",
+    "command": [
+      "/marimo/code/train_milk10k_effb2_dual_metadata.py",
+      "--data-dir",
+      "/marimo/milk10k",
+      "--backbone",
+      "efficientnet_b2",
+      "--backbone-backend",
+      "auto",
+      "--metadata-fusion",
+      "concat",
+      "--classifier-style",
+      "simple",
+      "--logit-fusion-mode",
+      "single",
+      "--loss",
+      "ce",
+      "--freeze-epochs",
+      "8",
+      "--finetune-epochs",
+      "40",
+      "--batch-size",
+      "8",
+      "--image-size",
+      "260",
+      "--selection-metric",
+      "f1_macro",
+      "--patience",
+      "6",
+      "--num-workers",
+      "4",
+      "--seed",
+      "42",
+      "--amp",
+      "--output-dir",
+      "/marimo/single_encoder_split_runs/singleenc_canvas_nometa_clean",
+      "--image-fusion",
+      "single_encoder_canvas",
+      "--disable-metadata"
+    ],
+    "python": "3.13.11 (main, Feb  3 2026, 03:08:54) [GCC 14.2.0]",
+    "platform": "Linux-4.4.0-x86_64-with-glibc2.41",
+    "executable": "/tmp/uv-venv/bin/python",
+    "torch": {
+      "version": "2.12.0+cu130",
+      "cuda_available": true,
+      "cuda_device_count": 1,
+      "cuda_device_name": "NVIDIA RTX PRO 6000 Blackwell Server Edition"
+    },
+    "git": {
+      "available": false
+    }
+  },
+  "class_names": [
+    "AKIEC",
+    "BCC",
+    "BEN_OTH",
+    "BKL",
+    "DF",
+    "INF",
+    "MAL_OTH",
+    "MEL",
+    "NV",
+    "SCCKA",
+    "VASC"
+  ],
+  "label_to_idx": {
+    "AKIEC": 0,
+    "BCC": 1,
+    "BEN_OTH": 2,
+    "BKL": 3,
+    "DF": 4,
+    "INF": 5,
+    "MAL_OTH": 6,
+    "MEL": 7,
+    "NV": 8,
+    "SCCKA": 9,
+    "VASC": 10
+  },
+  "metadata_spec": {
+    "sex_values": [
+      "female",
+      "male",
+      "unknown"
+    ],
+    "site_values": [
+      "foot",
+      "genital",
+      "hand",
+      "head_neck_face",
+      "lower_extremity",
+      "trunk",
+      "unknown",
+      "upper_extremity"
+    ],
+    "monet_columns": [
+      "MONET_erythema",
+      "MONET_gel_water_drop_fluid_dermoscopy_liquid",
+      "MONET_hair",
+      "MONET_pigmented",
+      "MONET_skin_markings_pen_ink_purple_pen",
+      "MONET_ulceration_crust",
+      "MONET_vasculature_vessels"
+    ]
+  },
+  "model_type": "DualEffB2MetadataClassifier",
+  "train_size": 4192,
+  "val_size": 1048,
+  "fold": null,
+  "metadata_fusion": "concat",
+  "image_fusion": "single_encoder_canvas",
+  "clinical_backbone": "timm efficientnet_b2",
+  "dermoscopic_backbone": "timm efficientnet_b2",
+  "paths": {
+    "output_dir": "/marimo/single_encoder_split_runs/singleenc_canvas_nometa_clean",
+    "data_dir": "/marimo/milk10k",
+    "dermoscopic_mask_dir": "None",
+    "clinical_checkpoint": "None",
+    "dermoscopic_checkpoint": "None",
+    "resume_checkpoint": "None",
+    "augmented_data_dir": "None"
+  }
+}

singleenc_canvas_nometa_clean/split_summary.md

@@ -0,0 +1,66 @@
+# Split Summary
+
+## Full
+
+- rows: 5240
+- real_rows: 5240
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 303 | 0 |
+| BCC | 2522 | 0 |
+| BEN_OTH | 44 | 0 |
+| BKL | 544 | 0 |
+| DF | 52 | 0 |
+| INF | 50 | 0 |
+| MAL_OTH | 9 | 0 |
+| MEL | 450 | 0 |
+| NV | 746 | 0 |
+| SCCKA | 473 | 0 |
+| VASC | 47 | 0 |
+
+## Train
+
+- rows: 4192
+- real_rows: 4192
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 242 | 0 |
+| BCC | 2018 | 0 |
+| BEN_OTH | 35 | 0 |
+| BKL | 435 | 0 |
+| DF | 42 | 0 |
+| INF | 40 | 0 |
+| MAL_OTH | 7 | 0 |
+| MEL | 360 | 0 |
+| NV | 597 | 0 |
+| SCCKA | 378 | 0 |
+| VASC | 38 | 0 |
+
+## Val
+
+- rows: 1048
+- real_rows: 1048
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 61 | 0 |
+| BCC | 504 | 0 |
+| BEN_OTH | 9 | 0 |
+| BKL | 109 | 0 |
+| DF | 10 | 0 |
+| INF | 10 | 0 |
+| MAL_OTH | 2 | 0 |
+| MEL | 90 | 0 |
+| NV | 149 | 0 |
+| SCCKA | 95 | 0 |
+| VASC | 9 | 0 |
+
+- synthetic_train_only: False

singleenc_pool_meta_clean.predict.log

@@ -0,0 +1,4 @@
+
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 97%|█████████▋| 58/60 [00:02<00:00, 46.46it/s]
                                               
+Tail audit DF: predicted_count=3, mean_probability=0.009810, max_probability=0.645351
+Tail audit INF: predicted_count=1, mean_probability=0.006476, max_probability=0.480001
+Saved predictions: /marimo/single_encoder_split_submissions/singleenc_pool_meta_clean.csv

singleenc_pool_meta_clean/confusion_analysis.json

@@ -0,0 +1,761 @@
+{
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singleenc_pool_meta_clean/confusion_matrix.csv

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singleenc_pool_meta_clean/confusion_matrix_raw.csv

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singleenc_pool_meta_clean/data_summary.json

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singleenc_pool_meta_clean/metrics.json

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singleenc_pool_meta_clean/per_class_metrics.csv

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singleenc_pool_meta_clean/per_class_metrics_raw.csv

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singleenc_pool_meta_clean/prediction_summary.json

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singleenc_pool_meta_clean/run_config.json

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+}

singleenc_pool_meta_clean/run_diagnostics.json

@@ -0,0 +1,822 @@
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+          "rate_of_predicted": 0.010101010101010102
+        }
+      ],
+      "VASC": [
+        {
+          "predicted": "VASC",
+          "true": "BCC",
+          "count": 2,
+          "rate_of_predicted": 0.2222222222222222
+        },
+        {
+          "predicted": "VASC",
+          "true": "INF",
+          "count": 1,
+          "rate_of_predicted": 0.1111111111111111
+        }
+      ]
+    },
+    "top_confusion_pairs": [
+      {
+        "true": "BKL",
+        "predicted": "BCC",
+        "count": 43,
+        "rate_of_true": 0.3944954128440367
+      },
+      {
+        "true": "SCCKA",
+        "predicted": "BCC",
+        "count": 30,
+        "rate_of_true": 0.3157894736842105
+      },
+      {
+        "true": "MEL",
+        "predicted": "NV",
+        "count": 28,
+        "rate_of_true": 0.3111111111111111
+      },
+      {
+        "true": "BCC",
+        "predicted": "SCCKA",
+        "count": 20,
+        "rate_of_true": 0.03968253968253968
+      },
+      {
+        "true": "AKIEC",
+        "predicted": "BCC",
+        "count": 18,
+        "rate_of_true": 0.29508196721311475
+      },
+      {
+        "true": "NV",
+        "predicted": "MEL",
+        "count": 12,
+        "rate_of_true": 0.08053691275167785
+      },
+      {
+        "true": "AKIEC",
+        "predicted": "SCCKA",
+        "count": 11,
+        "rate_of_true": 0.18032786885245902
+      },
+      {
+        "true": "BCC",
+        "predicted": "AKIEC",
+        "count": 11,
+        "rate_of_true": 0.021825396825396824
+      },
+      {
+        "true": "BKL",
+        "predicted": "SCCKA",
+        "count": 11,
+        "rate_of_true": 0.10091743119266056
+      },
+      {
+        "true": "MEL",
+        "predicted": "BCC",
+        "count": 10,
+        "rate_of_true": 0.1111111111111111
+      },
+      {
+        "true": "AKIEC",
+        "predicted": "BKL",
+        "count": 9,
+        "rate_of_true": 0.14754098360655737
+      },
+      {
+        "true": "NV",
+        "predicted": "BCC",
+        "count": 9,
+        "rate_of_true": 0.06040268456375839
+      },
+      {
+        "true": "NV",
+        "predicted": "BKL",
+        "count": 8,
+        "rate_of_true": 0.053691275167785234
+      },
+      {
+        "true": "BKL",
+        "predicted": "MEL",
+        "count": 7,
+        "rate_of_true": 0.06422018348623854
+      },
+      {
+        "true": "BKL",
+        "predicted": "AKIEC",
+        "count": 6,
+        "rate_of_true": 0.05504587155963303
+      },
+      {
+        "true": "SCCKA",
+        "predicted": "AKIEC",
+        "count": 6,
+        "rate_of_true": 0.06315789473684211
+      },
+      {
+        "true": "INF",
+        "predicted": "BCC",
+        "count": 5,
+        "rate_of_true": 0.5
+      },
+      {
+        "true": "MEL",
+        "predicted": "BKL",
+        "count": 5,
+        "rate_of_true": 0.05555555555555555
+      },
+      {
+        "true": "SCCKA",
+        "predicted": "BKL",
+        "count": 5,
+        "rate_of_true": 0.05263157894736842
+      },
+      {
+        "true": "BCC",
+        "predicted": "BKL",
+        "count": 4,
+        "rate_of_true": 0.007936507936507936
+      }
+    ],
+    "watched_confusion_patterns": [
+      {
+        "true": "BCC",
+        "predicted": "SCCKA",
+        "count": 20,
+        "rate_of_true": 0.03968253968253968
+      },
+      {
+        "true": "AKIEC",
+        "predicted": "SCCKA",
+        "count": 11,
+        "rate_of_true": 0.18032786885245902
+      },
+      {
+        "true": "BCC",
+        "predicted": "AKIEC",
+        "count": 11,
+        "rate_of_true": 0.021825396825396824
+      },
+      {
+        "true": "BKL",
+        "predicted": "SCCKA",
+        "count": 11,
+        "rate_of_true": 0.10091743119266056
+      },
+      {
+        "true": "SCCKA",
+        "predicted": "AKIEC",
+        "count": 6,
+        "rate_of_true": 0.06315789473684211
+      },
+      {
+        "true": "INF",
+        "predicted": "BCC",
+        "count": 5,
+        "rate_of_true": 0.5
+      },
+      {
+        "true": "SCCKA",
+        "predicted": "BKL",
+        "count": 5,
+        "rate_of_true": 0.05263157894736842
+      },
+      {
+        "true": "BCC",
+        "predicted": "BKL",
+        "count": 4,
+        "rate_of_true": 0.007936507936507936
+      },
+      {
+        "true": "INF",
+        "predicted": "NV",
+        "count": 2,
+        "rate_of_true": 0.2
+      },
+      {
+        "true": "INF",
+        "predicted": "BEN_OTH",
+        "count": 1,
+        "rate_of_true": 0.1
+      }
+    ]
+  }
+}

singleenc_pool_meta_clean/run_report.md

@@ -0,0 +1,161 @@
+# MILK10k Run Report
+
+## Config Summary
+
+- fold: None
+- output_dir: /marimo/single_encoder_split_runs/singleenc_pool_meta_clean
+- backbone: efficientnet_b2
+- metadata_fusion: concat
+- image_fusion: shared_encoder_pool
+- loss: ce
+- class_weight: False
+- weighted_sampler: False
+- balance_mode: none
+- balance_head_ratio: 2.0
+- balance_tail_floor: 100
+- balance_min_source_count: 20
+- augmented_data_dir: None
+- dermoscopic_mask_dir: None
+- min_dermoscopic_mask_ratio: 0.01
+- augmented_classes: []
+- augmented_max_per_class: 0
+- freeze_metadata_head: False
+- zero_augmented_metadata: False
+
+## Final Metrics
+
+- accuracy: 0.7127862595419847
+- balanced_accuracy: 0.41498903371947654
+- dice_macro: 0.4352677414310993
+- f1_macro: 0.4352677414310993
+- roc_auc_macro_ovr: 0.9120777303344489
+- top2_accuracy: 0.8721374045801527
+- top3_accuracy: 0.9360687022900763
+
+## Data Distribution
+
+### Train
+
+- rows: 4192
+- real_rows: 4192
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 242 | 0 |
+| BCC | 2018 | 0 |
+| BEN_OTH | 35 | 0 |
+| BKL | 435 | 0 |
+| DF | 42 | 0 |
+| INF | 40 | 0 |
+| MAL_OTH | 7 | 0 |
+| MEL | 360 | 0 |
+| NV | 597 | 0 |
+| SCCKA | 378 | 0 |
+| VASC | 38 | 0 |
+
+### Validation
+
+- rows: 1048
+- real_rows: 1048
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 61 | 0 |
+| BCC | 504 | 0 |
+| BEN_OTH | 9 | 0 |
+| BKL | 109 | 0 |
+| DF | 10 | 0 |
+| INF | 10 | 0 |
+| MAL_OTH | 2 | 0 |
+| MEL | 90 | 0 |
+| NV | 149 | 0 |
+| SCCKA | 95 | 0 |
+| VASC | 9 | 0 |
+
+## Per-Class Metrics
+
+| class | support | precision | recall_sensitivity | specificity | f1 | auc_ovr | mean_correct_confidence |
+| --- | --- | --- | --- | --- | --- | --- | --- |
+| AKIEC | 61 | 0.489362 | 0.377049 | 0.975684 | 0.425926 | 0.920358 | 0.74096 |
+| BCC | 504 | 0.786325 | 0.912698 | 0.770221 | 0.844812 | 0.920051 | 0.919828 |
+| BEN_OTH | 9 | 0.5 | 0.111111 | 0.999038 | 0.181818 | 0.868677 | 0.937172 |
+| BKL | 109 | 0.529412 | 0.330275 | 0.965921 | 0.40678 | 0.816484 | 0.762888 |
+| DF | 10 | 0.5 | 0.3 | 0.99711 | 0.375 | 0.979287 | 0.708548 |
+| INF | 10 | 0 | 0 | 0.999037 | 0 | 0.905588 |  |
+| MAL_OTH | 2 | 0 | 0 | 1 | 0 | 0.858031 |  |
+| MEL | 90 | 0.642857 | 0.5 | 0.973904 | 0.5625 | 0.901067 | 0.810999 |
+| NV | 149 | 0.73913 | 0.798658 | 0.953281 | 0.767742 | 0.966943 | 0.903091 |
+| SCCKA | 95 | 0.545455 | 0.568421 | 0.952781 | 0.556701 | 0.924173 | 0.869854 |
+| VASC | 9 | 0.666667 | 0.666667 | 0.997113 | 0.666667 | 0.972195 | 0.830316 |
+
+## Weak Classes
+
+| class | support | precision | recall_sensitivity | specificity | f1 | auc_ovr | mean_correct_confidence |
+| --- | --- | --- | --- | --- | --- | --- | --- |
+| MAL_OTH | 2 | 0 | 0 | 1 | 0 | 0.858031 |  |
+| INF | 10 | 0 | 0 | 0.999037 | 0 | 0.905588 |  |
+| BEN_OTH | 9 | 0.5 | 0.111111 | 0.999038 | 0.181818 | 0.868677 | 0.937172 |
+| DF | 10 | 0.5 | 0.3 | 0.99711 | 0.375 | 0.979287 | 0.708548 |
+| BKL | 109 | 0.529412 | 0.330275 | 0.965921 | 0.40678 | 0.816484 | 0.762888 |
+
+## Prediction Distribution
+
+| class | pred_count | mean_prob |
+|---|---:|---:|
+| AKIEC | 47 | 0.0512 |
+| BCC | 585 | 0.5248 |
+| BEN_OTH | 2 | 0.0058 |
+| BKL | 68 | 0.0787 |
+| DF | 6 | 0.0069 |
+| INF | 1 | 0.0042 |
+| MAL_OTH | 0 | 0.0007 |
+| MEL | 70 | 0.0738 |
+| NV | 161 | 0.1486 |
+| SCCKA | 99 | 0.0971 |
+| VASC | 9 | 0.0082 |
+
+- mean_confidence: 0.8461607694625854
+- median_confidence: 0.9354076385498047
+- mean_top1_top2_gap: 0.7422125339508057
+- mean_entropy: 0.43954163789749146
+- low_confidence_rows: 67
+
+## Top Confusion Pairs
+
+| true | predicted | count | rate_of_true |
+|---|---|---:|---:|
+| BKL | BCC | 43 | 0.394 |
+| SCCKA | BCC | 30 | 0.316 |
+| MEL | NV | 28 | 0.311 |
+| BCC | SCCKA | 20 | 0.040 |
+| AKIEC | BCC | 18 | 0.295 |
+| NV | MEL | 12 | 0.081 |
+| AKIEC | SCCKA | 11 | 0.180 |
+| BCC | AKIEC | 11 | 0.022 |
+| BKL | SCCKA | 11 | 0.101 |
+| MEL | BCC | 10 | 0.111 |
+| AKIEC | BKL | 9 | 0.148 |
+| NV | BCC | 9 | 0.060 |
+
+## Watched Confusion Patterns
+
+| true | predicted | count | rate_of_true |
+|---|---|---:|---:|
+| BCC | SCCKA | 20 | 0.040 |
+| AKIEC | SCCKA | 11 | 0.180 |
+| BCC | AKIEC | 11 | 0.022 |
+| BKL | SCCKA | 11 | 0.101 |
+| SCCKA | AKIEC | 6 | 0.063 |
+| INF | BCC | 5 | 0.500 |
+| SCCKA | BKL | 5 | 0.053 |
+| BCC | BKL | 4 | 0.008 |
+| INF | NV | 2 | 0.200 |
+| INF | BEN_OTH | 1 | 0.100 |
+
+## Warnings
+
+- [medium] tiny_validation_support: MAL_OTH validation support is only 2.

singleenc_pool_meta_clean/split_summary.md

@@ -0,0 +1,66 @@
+# Split Summary
+
+## Full
+
+- rows: 5240
+- real_rows: 5240
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 303 | 0 |
+| BCC | 2522 | 0 |
+| BEN_OTH | 44 | 0 |
+| BKL | 544 | 0 |
+| DF | 52 | 0 |
+| INF | 50 | 0 |
+| MAL_OTH | 9 | 0 |
+| MEL | 450 | 0 |
+| NV | 746 | 0 |
+| SCCKA | 473 | 0 |
+| VASC | 47 | 0 |
+
+## Train
+
+- rows: 4192
+- real_rows: 4192
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 242 | 0 |
+| BCC | 2018 | 0 |
+| BEN_OTH | 35 | 0 |
+| BKL | 435 | 0 |
+| DF | 42 | 0 |
+| INF | 40 | 0 |
+| MAL_OTH | 7 | 0 |
+| MEL | 360 | 0 |
+| NV | 597 | 0 |
+| SCCKA | 378 | 0 |
+| VASC | 38 | 0 |
+
+## Val
+
+- rows: 1048
+- real_rows: 1048
+- synthetic_rows: 0
+- ignore_metadata_rows: 0
+
+| class | count | synthetic |
+|---|---:|---:|
+| AKIEC | 61 | 0 |
+| BCC | 504 | 0 |
+| BEN_OTH | 9 | 0 |
+| BKL | 109 | 0 |
+| DF | 10 | 0 |
+| INF | 10 | 0 |
+| MAL_OTH | 2 | 0 |
+| MEL | 90 | 0 |
+| NV | 149 | 0 |
+| SCCKA | 95 | 0 |
+| VASC | 9 | 0 |
+
+- synthetic_train_only: False